Sander lucioperca (pikeperch): 116050412
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Entry
116050412 CDS
T07345
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116050412 (zfr)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116050412 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
116050412
NCBI-ProteinID:
XP_031156299
Ensembl:
ENSSLUG00000025645
LinkDB
All DBs
Position
2:complement(27823430..27847579)
Genome browser
AA seq
1074 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHGAAAQYSQQPTAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAATVAVARPAPVSVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQNYQVQNYQDSYSYVRSTAPAVAYDTKQYYQQPTATAAVAAAQSQPSVADS
YYQTAPKPGYSQGVTSYTQSQQTRQVTVIKPAAPSPASSTFSIYPVTSTVQPAAASVVPS
YSQSPTYSTNAVTYSGTSYSGYEAAVYSAASNYYQQQQQQQKQAVAAVAATAAWTGNTFT
KKPPFQNKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSST
SSGSGGGVLARNAQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEP
SMVTQTSASTTAAPSKTTTAPLSSSSSTSSLCVAASSSAATSSTPPYLKPVNIVSSGVVG
AKNTLANSFSAASPASAGKKVNAPKINFVGGNKLQTTVKMDEAKVEASKPATPSSANHDP
KTDVSDSLSTSALAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHL
KGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRR
YEEDMYWRRMEEEQHHWDDRRRMPDGGYPQGPPGPPGLLGVRPGMPGLQPQGPVPPRRPD
SSDDRYVMTKHAAIYPSEDELQSIQKIVSITERALKLVSDIITDQDKAKEEDKEEKEPSK
DRALKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLSRIVEHLPKQLTIVTPEKYE
VSGSIQEAAIILTSCVEPKMEVTITLTSPVIREENGRDGDVTSGMVKDPADVLDRQKCLD
ALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSTFPGWAMELLVEKAISSASAP
LSPGDALRRVFECISSGILLPGGPGLVDPCEKKLVDTLTTMGEQQREEITSSAQFALRLL
AFRQIHKVLGMDPLPQMNPRFNVRNSRKRRRDNSDGTDSLEGEGKKDKKDYDSF
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtccagtggtgtccttcacctatgtgcccagccggctcggtgaagat
gccaaaatggctaccggcaattactttggattcacccatggcgctgccgcccagtacagt
cagcagccgactgccggggtagcgtacacacatcccaccacagtggccagttacacggtt
catcaagcgcctgtggcggcacacactgtggcggcggcctacgctcccactgcagccacg
gttgctgtagctcggcctgcgcccgtctcagtagcggctgctactgctgcagcttatgga
ggataccagccaacccacgcggccactgactacggctaccctcagcgccagccggaggtc
cctccaccgccaccgcccgtcacctctcaaaactaccaggtacaaaactaccaggactcc
tactcctatgtccggtccacagctcctgctgttgcgtatgacaccaagcagtactaccaa
cagcctactgctactgcggcggtcgctgctgcacagtcacaacccagcgtggcagattcc
tactaccagacagcccccaaaccaggatatagccagggggtgacatcatacacccagagc
cagcagactcgacaggtgactgtgataaagccagctgctcccagtccagcctcgtccacg
ttctccatctacccagtgacctccactgtccagccagccgctgcgtctgtggtcccttcc
tactcccaaagcccaacatacagcaccaatgctgtcacctactccggaacctcgtactcg
ggttatgaggcagcagtttactctgcggcctccaactactaccagcagcagcaacagcag
cagaagcaggcagtggcagctgtagcagcaacagcagcatggacggggaacactttcacc
aagaaaccccccttccagaacaagcagcttcggcccaagcaaccgcccaagccccctcag
atccactactgcgacgtctgtaagatcagctgtgccggcccgcagacttacaaggagcat
ctggaaggccagaagcacaagaagaaggaagcggcactgaaggtttcccagagcagcacc
agcagcggcagtggtggaggggtgttggcccgcaatgctcagaaccagctccgctgtgaa
ctttgcgatgtttcctgcactggggctgacgcctatgctgcccatatccgtggagcgaaa
caccagaaggttgtgaagcttcataccaaacttggtaagcccattccctccactgagccc
agcatggtcactcagacatcggcctccaccacggcggctcccagcaagaccaccaccgct
cccctgagcagctccagcagcaccagctctctgtgtgtggcggcctcctcctctgctgcc
accagctccacccccccctacctgaaacctgtcaacatagtcagcagtggtgtggtgggt
gccaagaatacattagccaacagcttctctgctgccagccctgcctcagctgggaagaaa
gtcaacgcccccaagatcaattttgttggtggaaataaattacagaccacagtgaaaatg
gacgaggccaaagtggaggcctctaagcctgcgacgccctcttcagctaatcatgacccc
aagaccgacgtttcagattctctgtccacatcggccttggctgctctgcagagcgacgtc
cagcctgtcggtcatgactatgtggaggaagtccgcaacgatgaaggcaaagtcatccgc
ttccattgcaagctgtgtgaatgtagtttcaacgatccaaacgcaaaggaaatgcatctc
aaaggtcgtaggcatcgcctgcaatacaagaaaaaggtgaacccggatctgcaggtggag
gtcaagcccagcatccgagccagaaagattcaggaagagaagatgagaaagcagatgcag
aaagaggagtactggagaagaagagaggaggaggagcgctggagaatggagatgcggcgt
tatgaagaagacatgtactggagacgaatggaggaggagcagcaccactgggatgaccga
cggcgtatgccagacggagggtatccacagggccctcctggccctccgggtctccttgga
gtccggcctggcatgcctggcctgcaacctcagggtcctgtgcccccacgtcggcctgat
tcttcagatgaccgctacgtcatgaccaagcatgcagccatctacccctcagaagatgag
ctccagtccatccagaagattgtgtccatcacagaacgggccctcaaactggtctcggac
ataatcacagaccaggacaaggccaaggaagaggacaaagaggagaaagagccctctaaa
gacagagccctgaagggcgtgatgcgggttggcgtcctggccaaaggcttgctgctccgc
ggggacaagaacgtcaacctggtcctgctctgctcggagaagcccaccaagagtctcctt
agccgcatcgtggagcacctccccaaacaactaacaattgtaacaccagaaaaatatgag
gtcagtggatctatccaggaagcagcgatcattctgacttcctgtgtcgagccaaagatg
gaagtgacgatcacactgacttcacctgtcatcagggaggaaaatggccgggatggagat
gtaacctcgggtatggtgaaagacccagcggacgtcttggacaggcaaaaatgccttgac
gctctggctgctctgcgccacgctaagtggttccaggctagagccaatggacttcagtcc
tgtgtgatcatcatccgaatcctgcgagacctgtgtcagcgagttcctacgtggtccacc
ttccccggatgggccatggagctgctggtagagaaggccatcagtagcgcctcggccccc
ctcagcccgggggatgccctgagacgcgtctttgaatgcatttcctctgggatcttactc
cctggtgggccaggattggtagatccctgtgagaagaagctggtggataccctcacaacg
atgggcgagcagcagagagaggaaattacctccagtgcccagtttgctctaaggcttctg
gccttccgtcagatccataaggttttgggtatggaccctctgccgcagatgaaccctcgc
ttcaacgtccgcaacagccgcaagcgtcgccgtgacaacagtgatgggacggacagctta
gagggcgaaggcaaaaaggacaagaaagattatgatagtttctaa
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integrated database retrieval system
