Sander lucioperca (pikeperch): 116050475
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Entry
116050475 CDS
T07345
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sluc03041
]
116050475 (arvcfb)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116050475 (arvcfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
116050475
NCBI-ProteinID:
XP_031156411
Ensembl:
ENSSLUG00000012199
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All DBs
Position
2:complement(25226620..25495686)
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AA seq
1045 aa
AA seq
DB search
MEDYDVRSAASILASVKEQEARFEQLTRALEEERRNVTLQLERANLPPNPPTSQPLAWQQ
VVMQEQSPSNATTLAMMQEPQEVVEETVTIEEDPGTPTSHVSVVTSDDGTTRRTETKDIS
SNVKVTKVVKTITRRTYHPVTVTDNLLESRPATRTPTPVSISPPSTSETEPVTKMVKTVT
TRTVRQVPLGPDGLPLPEGSSPLGNYTDSIDRRYMKNGGFITPQATSTLTRSYNNSYNDS
YGETPESQYVRHYGLHDGYADLTDNYGSLSRGVNFRPPRYPYLPNSYRPENSYTLPIRKD
DYGHVAQPQVPMGNSTVDLNRSQPERFQPEPYGLEDDRRSLGPEEEEPYELEPDYSTANR
RTLQGANRGRTHREPLRDVPRVRGYPDEAIEAELIDERHPYIHGMYSAPLAQPERGSMAS
LDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKK
DVRQLKGIPVLVGLLDHPKSEVHRKACGALRNISYGKDNDNKVAIKNCDGIPALVRLLRK
TNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWEHEPNEDSKPRDAE
WTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVGKKDMDNKSVENCVCI
MRNLSYHVHKEVPGAEKFQDPSALQAPGSAGPQRKKKDDAGCFGGKKAKEEWFNQGRKNG
DNDKNYDTLDLPKRSEPSKGFELLYQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQ
WTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVSIALRNLSIDRRNKDLIGSYAMRDL
VSNLPSGQQRPAKNLEEDTVVAILNTIHEIVTDSSENARSLAQAQAIEKLVAINRTSQSA
RETKAASHVLQTVWSYKELRNALTKDGWNKSHFQPTVTATPKATKNGKPGYDDTTLPLME
KNQGPRKCGSGDMIPMDELGPDGYSTIDQKDKDCKYKTVDSSVDQTDREPLKNDTNRKHY
IRSNRPAVSLVDACDVKPQPVDSWV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggaggactatgatgttcgctcggccgccagcatcctggcctcagtgaaagagcaggag
gcgcgctttgagcagctgacccgagcccttgaggaggagcggcgcaacgtcacgctgcag
ctagagcgcgccaacctgcctcccaacccccctaccagccaaccgctagcatggcagcag
gtggtgatgcaggagcagagccccagcaacgccacaaccctggctatgatgcaggagccg
caggaggtggtggaggagacggtcaccatagaggaggaccctggcacccccacctcccac
gtctctgtggtcacctctgatgacggcaccacacggcgcacagaaaccaaggatatctca
tctaacgtgaaggtgaccaaagtggtcaaaaccatcacacgccgcacctatcatccagtg
acggtgactgacaacttgttagagtccaggcctgccacccggacccccaccccggtctcc
atctcgccccccagcacatcggagacagaaccagtgactaagatggtgaagacagtgacc
acacggacagtgcgccaggtgcccctaggccccgatggcttgcccctgcccgagggctcg
tctccactaggcaactacaccgactccattgaccggcgctacatgaagaatggaggcttc
atcacgcctcaagcaacctccaccctgacgcgctcctacaacaactcctacaacgattca
tacggcgagacacctgagagccagtacgtccgccactacggcctgcatgatggctacgcc
gatttgacggacaactacggcagcctgtcacgcggcgtcaacttccggccaccgcgctac
ccctacctgcccaacagctaccggccagagaacagctacacgctgcctattcgtaaggat
gactacggccatgtggcccagccccaggtgcctatgggtaacagcactgtggatctgaac
cgctcgcagcctgagcgcttccagcccgagccatatggcctggaggatgatcgccgcagc
ttgggccctgaagaggaggagccatacgagctggagcccgactactccactgcaaaccgc
cgcaccctgcagggggccaaccggggtcgcacccaccgggaacctcttcgtgatgtgccc
cgagtcagagggtacccagacgaagccatcgaggcagagctgatcgatgagcgccacccc
tacatccatggcatgtattcagcgccgctggcccagcccgagagggggagcatggccagt
ctggaccgcatgggcggccggcgctcaccgtccatcgacagcatccgcaaagacccgcgc
tggcgtgacccagacctccccgaggtgatcgccatgctgggtcatcccattgacccggtc
aagtccaacgccgccgcctacctgcagcacctgtgctacgaaaatgacaagattaagaag
gatgtgcgtcagctgaaggggattcctgttctggtggggcttctggaccaccccaaatcc
gaagtccaccgcaaggcttgcggcgccctgcgcaacatctcctacggcaaggacaacgac
aacaaggtggccatcaagaactgtgacggcatcccagccctcgtgcgcctgctgaggaag
accaatgacatggaggttcgagagctcatcaccggaaccttgtggaacctgtcgtcctat
gaacccctgaagatggtgatcatcaaccacggcctgcagaccctgaccaacgaggtcatc
atcccccactcggggtgggagcacgagccaaacgaggactcgaagccccgcgacgccgag
tggaccaccgtctttaagaacacctccggctgcctcagaaatgtgagctcagacggggca
gaggctcgccgcagactgagggaatgcgagggattggtggacgccctgctgcacgcgctc
caatcagctgtagggaagaaagacatggacaataagtctgtggagaactgcgtttgtatt
atgaggaacctgtcctaccacgtccacaaagaggtgccaggggccgaaaagttccaggac
ccctcggcgctacaggcccctggctcggcaggaccacagaggaagaaaaaggacgacgcc
ggctgcttcggaggcaagaaagccaaagaggaatggtttaatcaaggcaggaaaaacggt
gacaacgacaaaaactacgacacgctggatctgcccaagcgctcagagccgtcaaaaggc
tttgagctgctgtatcagccggaagtggtgaggctctacctatctctgctgactgagagc
cagaactacaacaccctggaggccgctgccggggctctgcaaaacctcagcgctggacag
tggacttggtccaactacatccgagccacggtgcgtaaggagaaaggtcttcctatcctg
gtggagctgctgcgctccgactcggacaaggtggtccgagctgtgtccatcgccctgcgc
aacctgtccatcgaccgccgcaacaaggacctgatcggaagttatgccatgcgggacttg
gtgagcaacctgcccagcggtcaacagcggccagccaaaaacctggaggaggacactgtg
gtggccatcctcaacaccatccatgagattgtcacagacagctctgaaaacgcccgctct
ctcgcccaggctcaggccattgagaagctggtcgccatcaacaggaccagccaatcagct
cgcgaaaccaaggcggcatcccacgtgctgcagacggtctggagttataaggagctgagg
aacgctttgaccaaggacggctggaacaaaagccacttccagcccacagtgacagccacc
cccaaagcaaccaagaacggcaagccaggctacgacgacaccaccctacccctgatggag
aagaaccagggacccaggaaatgtggcagtggtgatatgatacctatggatgagctgggt
ccagatggttactccaccattgaccagaaagacaaggactgcaaatacaagacagtggac
agctcagtggaccagacagaccgggagccattaaagaatgacacaaataggaaacactat
atcaggagtaacaggcctgcggtcagtctggtggacgcttgtgatgttaagccccagcct
gttgactcctgggtctaa
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