Sander lucioperca (pikeperch): 116050534
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Entry
116050534 CDS
T07345
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116050534 (gapvd1)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
116050534 (gapvd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
116050534
NCBI-ProteinID:
XP_031156520
Ensembl:
ENSSLUG00000000569
LinkDB
All DBs
Position
2:40936986..40994427
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AA seq
1483 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNSDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFVDGYKTLGFQETIYGEFLARLWENPRLVASCLVAGERL
NQENTQAVTHTVFTALYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSV
LFKLFTEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKVTERLTPAQQERFGEKGSE
GYKQRVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKSCVAAFLDVVLGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLMLVDFVR
NVMAGDHLREEEHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTTTALSAHIPLVTPFAAARSRSRTNIAQEGEAEASSQESLQELMPEEVL
VISLGTGPQSVPGMMSENEVLNLQMADGAQGDGHADDTKLHGKPDKTLRFSLCSDNLEGI
SEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEI
RDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEIAGAAAENMLGSLLCLPGSG
SVLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREV
SSRPSTPGLSIVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESGHGAHHPTS
PPSQTDSLLAMFDPLSSAEGSTGTIVRPKVHYARPPHPPPDPPIPEASALGPETRHSLFT
PHCLAQAELEHTKQRHSFPDRLVRSRSSDIVCPGRRPTSDPGLNRRVAVEERDPAGAFTL
GPSSSPSKDSLKGEVEDRSDDEKSDRNRPWWKKRFVSAIPKVLYWTAESDVPAPIAAFRK
RDKQEKDDVVPERVPQDDPLPRQSSHAQAAEDILDKYRNIKRTSPSDGATGGASYDVTGD
LCVEDSVHDSPREDALQNISADDLPDSASQTAQQHDCKFSFSDAKKKLRLALCSADSVAL
PIMVPATTRNGLPDHMDSEENLIVCFLKIQLAEAINLQDKNQMAQIQETTRCVGRFDPRT
CRKLLAAIAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVR
LLLEHMEAKMLDFIKAFQGCTASDDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQM
AIERSVMNRIFKLAFYPNQDGDILRDQLFHEHIQRLTKVVTANHKALQIPEVYLKEAPWP
SAQSEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANP
PCLLSTVQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccacctgaagcaggagcggctgtacgtg
gcatcagagaagcagctgatccagaggctcaacagtgatgtgctgaagacagccgagagg
ctgtaccgggccgcgtggatcgccaagcagcagaggatcaacctcgaccgtcttattctc
accagtgcggaggcctctccggctgaatgctgccaacatgccaaaatgctggaagacaca
cagtttgtcgatggctacaagactctgggcttccaggagacgatctatggcgagttcttg
gccaggttatgggagaaccccagactggtggcttcctgtctggtggcaggagagaggctg
aaccaggagaacacccaggcggtcacacataccgtcttcaccgcactttatggcaactgt
attatgcaggaggatgaaagctacctgctacaggtgctgcgatacctggtggagtttgag
ctgaaggagagtgacaaccctcggcgcctactgcgacgggggacttgcgccttcagcgtc
cttttcaagctcttcaccgaaggcctgtactcggccaagctcttcctcaccgccaccctc
cacgaacccattatgcagctgctggtggaagacgaagaccacctggagacggaccctgcc
aaggtgacggagcgcctcactccggcccagcaggaacgcttcggagagaagggttcggag
ggctacaagcaaagggtgcaggccgccgtggaggccaacgaagccaagctggtcgctctg
gtcaacaagttcatcggctacctgaagcagaacacctactgcttcccccacagcctgcgc
tggatcgtgtcacagatgtacaagactttgtcgtgcgtggagcgtctcgaggtgggcgag
gtgcgcaccatgtgtacagacctgctgctcacctgcttcatctgcccagccatagtcaac
cccgagcagtatggtatcatctcagacgcacccatcaacgaagtagcccgcttcaatcta
atgcaggttgggcagcttttgcagcagttggccatggctgatgatgatgcagacccaagg
cggaaaagcagtttgtccaaatttgataagagttgtgtagccgcctttctggatgtggtt
cttgggggaagagcagtcgagaccccacccatgtcctcaatgaaccttctagaaggcctc
agtaggactgcggtctatattacacataatcagctgctcatgctggtggactttgtgcgg
aatgtgatggcaggggaccaccttcgggaggaggagcacatggctctggagaccctgctg
gccaacgtgccccagtctcgaactgtgaagagcaacagtctggagctcaccccctccaac
acccctcagctctccccagctaccacccctgccaacaagaagaacaggctccccatagga
caacacttagccgctataacgtcctgggaccccaccaccaccgctctgtctgctcacatt
ccattagtaaccccttttgcagcggctcggagccgcagccgtaccaacatcgcccaggag
ggggaggcagaggccagctcccaggagtccctgcaggagctgatgccagaggaggtgctg
gtgatttcactaggaactggtcctcagtctgtccctgggatgatgtcagagaatgaggtc
ttgaacctgcagatggctgatggggcccagggggacggccatgctgatgatactaagctg
cacggtaaaccagacaaaaccctgcgcttctccctctgcagtgacaacttggaaggcatc
tcagagggtccgtccaatcgttctaactctgtgtcttctctggacctggagggagagtct
gtctcggagctaggagccggaccgtcggggagcaacggggtggaggctctacagcttctg
gagcatgaacaggccaccactcaggacaacctggacgacaaactgcgcaagtttgagatc
agagacatgatgggtctgacagatgaccgggacatctccgagacggtcagcgaaacctgg
agcaccgatgtgctcggcagtgactttgaccccaacatggatgaagaccggctgcaggaa
atagcaggggcagctgcggagaacatgctcggcagcctgctgtgtcttcctggctcgggt
tcagtgctgctggacccctacggctccaccatctcggagaccacaagcgaggcgtggagc
gtggaggtcctccccagcgactcagaagccccagacctgaaacaggaggagcgcctgcag
gagctggagagctgctccggggttggcagtacgtccgatgacaccgaggtccgagaggtc
agctccagacccagcacacccggcctcagtattgtctcaggcatcagtgcaacctcagaa
gacatccccaacaagatcgaggacctgcggtcagagtgcagctcagactttggagggaag
gactctgtgaccagtccagatggggaggagtcaggccacggagcacatcatccgacatct
ccgccctcacagaccgattccttactggccatgtttgatcccctctcctccgccgaaggc
tccactggaacaatagtgaggcccaaagtgcactacgccaggccccctcaccctccccca
gatcctcccatccctgaagccagcgccctggggcccgagacgcgccactctctcttcacg
ccccactgcctggcccaggccgagctggagcacaccaagcagcgccactccttccccgac
aggctggtccggagccgcagctccgacattgtgtgcccaggccgccggcccactagcgac
cccggccttaaccggcgggtcgcggtggaagagcgcgaccctgccggagccttcacctta
gggccgtcctcgtcccccagcaaagactccctcaaaggagaggttgaggacaggagtgac
gacgagaagtctgatcgcaacaggccatggtggaagaaacgttttgtgtcggccattcca
aaagtgctgtattggacggctgagagtgacgtcccagcgcccatagctgcgtttcggaaa
agggacaagcaggagaaagacgacgttgtcccggagcgtgtcccccaagatgacccgttg
cccagacagagctctcatgcgcaggcagctgaagacatcctggacaagtacaggaacatc
aagaggacgagcccgagtgatggagccacaggtggagcttcttacgatgttacaggagat
ctttgtgttgaggacagcgtgcacgactctcctagagaagacgctctgcagaacatttct
gcagacgacctcccagactcagccagccagacggcacagcagcatgactgcaagttctct
ttcagtgatgcgaagaagaagttgaggttggcgttgtgttctgcagactcagtggctctg
cccatcatggtccctgcaaccacacgaaacgggctgcctgaccacatggactctgaagaa
aatttgatcgtctgcttcctgaagatccagctagcagaggccatcaacctgcaggacaag
aaccagatggcccagatccaggagaccacgcgctgcgtcggccgcttcgacccacgcacc
tgcaggaagctgctggctgccatcgccgaggattacagaaagcgggcgccgtacatagct
tatctgacccggtgtcgccagggcctgcagacgtcccaggcccacctggagaggctcctc
cagagggtgctccgagacaaggaggtggccaaccgctacttcaccaccgtgtgtgtccgc
ctccttctggaacacatggaggccaagatgctggacttcattaaagcgttccaggggtgc
acagcgtcggatgacaagacggcagccgtggaggattttctgcgctacttgtacggcgcc
atggcccgtgatgccatttggcagtacgctagcgaggaccagctgcaggacgcccagatg
gctatcgagcgcagcgtcatgaaccgcatcttcaaactggccttctaccccaaccaggat
ggagatattctccgagaccagcttttccatgaacatatccagcggctcacaaaagttgtg
acggccaatcataaagctcttcaaatcccagaggtttacctgaaggaggctccgtggccc
tctgcacagtccgagatcaggaccatcaacgcgtacaagacgccacgagacaaagtccag
tgtatactgcgcatgtgttccaccatcatgaacctcctcagtctggccaatgaggactcc
gtccctggagcggatgactttgtccctgtacttgtctttgtcctcataagggcaaacccg
ccctgcctgctgtccaccgttcagtacatcaataatttctacgccagccggctgagtggg
gaggagtgctattggtggatgcagttcaccgcggcggtggaattcattaagaccatcgac
gatcgcaagtga
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