Sander lucioperca (pikeperch): 116050584
Help
Entry
116050584 CDS
T07345
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116050584 (hnf1a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116050584 (hnf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Motif
Other DBs
NCBI-GeneID:
116050584
NCBI-ProteinID:
XP_031156642
Ensembl:
ENSSLUG00000019422
UniProt:
A0A8C9ZNE7
LinkDB
All DBs
Position
2:43098123..43105452
Genome browser
AA seq
574 aa
AA seq
DB search
MEERVEERPGVAMARPSSLTALQEQLIWALLGSGLSRDILVQAMGELERDRASAGAERGE
RGDEESSEEGEMDFPPPIFRELEKLHPEEVAKLRAEVDQLLQEDPWHVAKMVKSYMQQHN
LPQREVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKRGEISQQFTNAKHGLGSA
EEQGEESRKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNRAECHQRGVSPS
QLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTNQSASSSHPNLPPSPEHVYWG
LTSCFPGVKYSQQILCESVSSARGSAGERVGRLVVSPIQLEPSHTLLETHNHKLVSSGGP
LPPVSTLTSLHSLSASPASSQGLIMASLPSVMSLGESSLLIGLTSTQSQTVPVINNVGGG
FTTLQPISFQQQLHGSPQQPLSHHLQSHMGASPFMATMAQLPCHMYNKFDSPQYHSSSLL
SQAMVIADSGSLGTLTSLTAVRQNLTADPEEQTDRPLQEDSLHLQPHTPVPASSESLELY
PASQSTESHQSHLLSPSPTDISSYIPTQMVSTAQ
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagggtagaggagaggcccggggtagccatggcgaggccgagcagtttgact
gcccttcaggagcagctgatctgggccctgctgggatctggactgtcccgggacatcctg
gtccaagccatgggggaactggagcgagacagggcgagtgctggcgccgagaggggagag
aggggggacgaagagagctccgaggagggagaaatggatttcccaccacctatattccga
gagctggagaagcttcacccagaggaggtggccaaactgagggccgaagttgaccagcta
ctgcaggaggacccctggcacgttgctaaaatggtgaaaagctacatgcagcagcacaac
ctccctcagagagaggtggtggagtccaccggactcaaccagtcccatctctcccagcac
ctcaacaaaggcacgcccatgaagaaccagaagagagcgtctctgtacacctggtacgtc
aagaagcgaggcgagatcagccagcaatttaccaacgccaaacatggccttggctctgcg
gaggagcaaggagaggagtctagaaaaggacggaggaacaggttcaaatggggtcctgca
tccctgcagatcctcttccacgcctacgaacgacagaagaaccctagcaaggaggagaga
gaggggttagtggaggattgtaacagggcagagtgtcatcagaggggggtgtctccctcc
cagcttgccggcctgggctccaacctggtaaccgaggtccgcgtgtacaactggttcgcc
aaccgccgcaaagaggaggccttccgtcacaaactggctctcgacacaccttttaccaac
caatctgcctcctcttctcaccccaacctcccaccgagccctgagcatgtgtattggggc
ctgacttcttgttttccaggggtgaaatacagccagcagatcctgtgcgaaagcgtgagc
tcagccagaggaagcgcaggagagagagtgggacgtctggtggtcagccccattcagctg
gagcccagccacacactccttgagacacataaccacaagctggtgtccagcggtggccca
ctgcccccagtaagcactctgacctcgctgcacagtctgtctgcgtcccctgcctcctcc
cagggcctcatcatggcctccctccccagcgtcatgagcctgggggagtcctcacttctc
atcggtttaacctccacgcagtctcagaccgtgcctgttatcaacaatgtggggggcggt
ttcaccactctccagccaatctcattccagcagcagcttcacggctctccccagcagcca
ttatcgcaccacctccagagtcacatgggtgccagtcccttcatggcaaccatggcgcag
ctgccatgtcacatgtacaacaagtttgattcgccccagtaccattcgtccagtctgctg
tctcaagccatggtcatcgctgacagcggcagcctggggacgctgaccagcctcactgct
gtcagacagaatctaacagcagatcctgaggaacagacggatcgacctctacaagaagac
tctctccacctgcagccgcacacacctgtgccagcttcctccgagagcctcgagctgtat
cctgcttctcagagcacagaaagtcatcagtctcacctgctctcaccttccccgacagac
atcagctcttacatccctacacaaatggtctctactgcacagtag
DBGET
integrated database retrieval system
