Sander lucioperca (pikeperch): 116050592
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Entry
116050592 CDS
T07345
Symbol
msi1b
Name
(RefSeq) RNA-binding protein Musashi homolog 1b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116050592 (msi1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116050592 (msi1b)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116050592 (msi1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116050592
NCBI-ProteinID:
XP_031156658
Ensembl:
ENSSLUG00000018871
LinkDB
All DBs
Position
2:complement(43070740..43092730)
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AA seq
349 aa
AA seq
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METEGSQSSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSNQSRTAGFLGTSSP
GPMADLYGTAAQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagcctgtccaccacggactcccctcacgatccctgc
aaaatgttcataggtggactcagctggcaaacaacacaagagggcttgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agaggatttggattcgtcacctttgttgatcaggccggcgtggataaagttttggcccaa
accagacacgaattggactcaaaaacaatcgacccaaaggttgcattccctcgcagagct
cagcccaagttagtgacacgaaccaagaagatctttgtgggaggcctgtcagtgaacaca
accatcgaagacgtgaaacagtacttcgaccagtttgggaaggtcgacgatgccatgctc
atgtttgacaagaccaccaacagacacagagggtttggctttgtgacgtttgagaacgag
gacgtggtggagaaagtctgcgagatccacttccacgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtcccccacaggctcagccagggggcgctct
cgcgtgatgccctatgggatggacgccttcatgctgggcattggtatgctaggttaccca
ggcttccagacagccacctacaccagtcggagctatgctggcatcactcctggatatacc
taccagttccctgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctgacagcatatggaccaatggcagcagcagcagcggcagca
gcagtagttagaggctccaaccagtctcgcacagctgggttcttgggtacgagcagcccg
ggcccgatggcggacctttatgggacagccgctcaggagtcggctgtcagcagttacctc
agcgctgcaagccccgccccaagcactggattcagccacagtctggggggccctttgatc
gccacggccttcactaacggctatcactga
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