Sander lucioperca (pikeperch): 116050627
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Entry
116050627 CDS
T07345
Symbol
nr6a1a
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A isoform X2
KO
K08561
germ cell nuclear factor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116050627 (nr6a1a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116050627 (nr6a1a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
116050627 (nr6a1a)
Nuclear receptors [BR:
sluc03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
116050627 (nr6a1a)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116050627
NCBI-ProteinID:
XP_031156710
Ensembl:
ENSSLUG00000023866
LinkDB
All DBs
Position
2:43593223..43707074
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AA seq
451 aa
AA seq
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MDTWEDDPADQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSR
KQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQITEEEIERIMSGQEFKEDA
PEHTWGTNGDSDHSSPSNGASEGNQPSPASTLSSNRSVEMNGYTAALRDQYINTSMSTHY
QLLPHLFSYAAQSGLLAPQPRSLYPQSHPLVLQLVAAEDLAPLATPMLIEDGYKVTQVEL
FALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQIFGD
LADVTAKYTPSDDELQGFSEDGMEVMERLIYLFRKFHQLKISNEEYACMKAINFLNQDIR
GLSNVSQLEQLNKRYWYVCQDYAEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNVPLEQLP
LLFKAVLHSCKSSLTSYRTGPSPCVTTSSGN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatacatgggaagatgatccagcggaccagcgtacttgccttatctgtggagatcgc
gccacgggcctgcactatggcatcatctcctgcgagggctgcaagggcttcttcaagcgc
agcatctgcaacaagcgcgtgtaccgctgcagccgcgacaagaactgcgagatgtcgcgc
aagcagcgcaaccgctgccagtactgccgcctcctcaagtgtctgcaaatggggatgaac
cgcaaagcaatcagggaggatggcatgccaggagggaggaacaaaagcatcgggcctgtt
cagatcacagaggaggagatagagcggatcatgtcaggccaggagttcaaggaggatgcc
ccggagcacacctggggcaccaacggcgacagcgaccacagctctccgagcaacggagcc
tcggagggcaatcagccatcgcccgcctccaccctgtcatccaaccgctctgtggaaatg
aacggctacacggcggccctcagggaccaatacatcaacacctccatgtccacacactac
cagctcctgcctcacctgttcagctacgcggcccagtccggcctgctggccccccagccc
cgcagcctctacccacagtcccacccactggtgctgcagctggtggctgctgaagacctg
gcccccctggcaacccctatgctcatagaagacgggtacaaagtgacccaggtggagctg
tttgcgctgctgtgccgcctggcggacgagctgctcttccgccagatctcctggatcaag
aagctgccgttcttctgcgagctctccatagaggattacacctgcctgctcagctccacc
tggcaggaactcatcctgctctcctgcctcaccatctacagcgcccagatcttcggagac
ctggccgacgtcaccgccaagtacacaccgtctgacgacgagctgcagggcttcagcgag
gacggcatggaggtgatggagaggttgatatatctgttccgcaagtttcaccagttgaag
atcagcaacgaggagtatgcctgtatgaaagccatcaacttcctcaaccaagatatcaga
ggattgtccaacgtctcccagctggagcagctgaacaagcgctactggtatgtgtgtcag
gactacgctgaatataagtacccgcaccagcccaaacgcttccctgagatcatgatgtgt
ctcccggagatccgctgcatcgcagggaagcttgtgaatgtccctctggagcagctccca
ctcttgttcaaagcagtcttgcactcctgcaaatccagcctgaccagctacaggaccggc
ccgtcgccctgcgtgaccacctcctccggaaactag
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