Sander lucioperca (pikeperch): 116050762
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Entry
116050762 CDS
T07345
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116050762 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sluc03009
]
116050762 (efl1)
Ribosome biogenesis [BR:
sluc03009
]
Eukaryotic type
Pre-60S particles
GTPases
116050762 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
DUF6667
ARM_LRRK2
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
116050762
NCBI-ProteinID:
XP_031156841
Ensembl:
ENSSLUG00000021102
UniProt:
A0A8D0A7X6
LinkDB
All DBs
Position
3:32499325..32664522
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AA seq
1121 aa
AA seq
DB search
MGHTSLDKIIALQRNPANIRNLCILAHVDHGKTTLADCLVASNGIISTRLAGKLRYLDSR
EDEQIRGITMKSSAISLHYRNGDQDYLLNLIDSPGHIDFSSEVSTAVRLCDGAIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLILELKLTSQEAYSHLQKILEQVNAVTGTL
FTSKVMEERAEKEKKEEEVEEEEKESKILSGDQVYDWSAGLEEADDSQLYFSPDQGNVVF
ASAIDGWGFSIQQFAHIYSQKMGIKAEVLLKTLWGDFYLNAKAKKIMKGAQVKGKKQLFV
QLVLDNIWSLYDAVVTRRDKEKVEKVIASLGVKVLARDSRHSDPKVLLSAICSQWLPLAQ
AVLSMVCEKLPSPIDMTAERVEKLMSVGPRRFDSLPEQTQELKRAFLQCSSGENDPLIIF
VSKMFAVDTKTLPQNRQRPLTQEEIAQRRELARQRHADRMAADQTAAESRSQEGQPAGCD
SAKMEGLTLKDSQPEEEDQQTFVAFARVYSGVAKKGRRVFVLGPKYDPAQGLSMMPEGSS
AWDRVPAVPHLSICSMDSLYLLMGRELEELDEVPVGNVLGIRGLEECVLKSATLSTSPAC
PPFIPLNFEATPILRVAIEPKHPSEMPKLVRGMRLLNQADPCAEVLIQETGEHVLVTAGE
VHLQRCLDDLRKRFAKIEISASKPIIPFRETVVRPPKVDMVNEDLGKQHKVAIIHQVKEE
ASQGRPSDTLHVDHSGLVTLTTPNRLATVSVRAIPLPQEVTCLLESSTELIRTLEQVNMS
LREGKSLDISPRTLEAIAGLKAQLESLLQGRKWRNAVEHIWAFGPRRYGPNILLNLVEGY
QRPSLWQCLGRGDQSGEAGAQAAGMRDLDNSIVSGFQLATLSGPMCEEPLMGVCFSVERW
DIQSAALPQHQDSLKEDSISHGALTDSRVEGSSETWTAGLCQARRRPQAASADCYGPVSG
QLIAAMKEACRHAFQAQPQRLMAAIYTCEIMATAEVLGRVYGVLGKREGRVLHEEMKEGT
DMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVISSDPCWVPTTEEEYLHFGE
KADSANQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLGKNK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaccagcctggataagatcattgcactgcagagaaaccctgccaacattaga
aacctttgcattctggcacatgttgaccatggcaaaactactctggctgactgcttggtg
gcaagtaatggtatcatatcaactcggctggctgggaagctgaggtatctggacagccgg
gaggatgaacagatcagaggaatcaccatgaagtctagtgccatctccctgcattacaga
aatggagatcaggactacctactaaatctgatcgactctcctggtcacatcgacttctcc
tcagaggtttccactgctgtccgcctgtgtgacggggccattatagttgttgatgctgtg
gagggagtgtgtcctcagacccaggctgtgctgcgccaggcgtggctggagaacatcagg
cctgtcctggtcatcaacaagatagaccgactcatcctggagctgaagctcacctctcag
gaagcttacagccacctgcagaagatcctggaacaggtaaacgcggtgacaggcactttg
tttacatccaaagtgatggaggagcgggcggagaaagagaagaaggaggaggaggtggag
gaggaggagaaagaaagcaagatcctgagtggagatcaggtttatgactggagtgccgga
ctagaggaggccgacgactcccaactctacttctcccccgaccaggggaatgtggtgttt
gccagcgccatcgatggttggggctttagcatccagcagtttgcccacatctacagccag
aaaatgggtatcaaggcagaggtgctgctcaaaaccctgtggggagatttctacctcaat
gctaaagcaaagaagatcatgaaaggagctcaggtcaaaggaaagaagcagctgtttgtg
caacttgtgctggataacatttggagtttatatgatgccgttgtcactaggagagacaag
gagaaagtggagaaggtgatagcatcactcggggtgaaggtgttggccagggactctcgt
cactcggaccccaaagttcttctttctgccatctgcagccagtggttacctctggcccag
gctgtcctctcgatggtgtgtgagaaacttcctagtcccatagacatgacggcagagagg
gtggagaaactgatgagtgtcgggccgcggcggttcgactcactgcccgaacagacgcaa
gagctgaagagagcattcctccagtgttccagtggggaaaacgatccgctcatcatcttt
gtgtccaagatgtttgctgttgacaccaagaccttgcctcagaacaggcagaggccgttg
acccaggaggagatagcccagcgcagggagctggctcggcagagacatgctgacaggatg
gcagctgatcagacagcagcagagagccgctcacaggaaggccaacctgcaggatgtgac
tcagctaagatggagggtctgacactgaaggactcccagccggaggaggaggatcagcag
accttcgtcgcgtttgcgcgggtctacagcggtgtggccaagaaaggacggagagtattt
gtgctgggaccaaagtatgaccccgcccagggcctgagcatgatgccagagggttccagt
gcttgggaccgtgtgcctgccgtgccccatctgtccatctgttccatggacagcctctac
ctgctgatgggccgggagctggaggagctggatgaggtgcctgtagggaatgtcctgggt
atcagaggtctggaggagtgcgtgttgaagtcggccacactgtccacctcccccgcctgc
ccgcctttcatcccactcaactttgaggccacgcccattttaagggtcgccatagaaccc
aaacacccaagcgagatgcccaagctggtgcgtgggatgcgtctgttgaaccaggcggat
ccctgtgctgaggtcctgatccaggaaacaggagaacacgttctggtcacggctggcgag
gttcatctccaacgctgcctggacgacctcagaaagcggtttgctaaaatagagattagc
gcgtccaagcccatcattccattcagagaaacagtggtacgtcccccaaaagtggacatg
gtgaacgaagaccttgggaagcagcacaaagtagccatcattcaccaggtgaaagaagag
gcctctcagggtcgaccgtctgacaccctccatgtggaccacagtggactggtcaccctc
acaactcccaacagactggccactgtcagcgtccgggccatccccctcccacaggaggtg
acctgtctgttggagagcagcacggagctgattcggactctggagcaggtgaacatgtcc
ctgagggaggggaagagtctggacatcagccccaggaccctggaggccatcgctggactc
aaggcccagctggagagcctgctgcaggggaggaagtggagaaacgctgtggagcatatc
tgggcctttggccctcgcagatatggtcccaacatcctgctgaaccttgtggaaggctac
cagcggccctcgctgtggcagtgtctgggcaggggagaccaatctggcgaggccggagct
caggccgcaggtatgcgagacttggacaacagcatcgtcagcggcttccagctggcaact
ctgtcagggcccatgtgtgaggagcccctgatgggtgtgtgcttctctgtggagaggtgg
gacatccagtctgcagccctgccacagcatcaggactccttgaaggaggactccatatcc
catggggctttaacagacagcagagtggaaggaagcagtgagacatggacagcagggctg
tgccaggccaggcgcaggccgcaggcagcctctgcagactgctacgggccggtctccggt
cagctgatcgccgccatgaaggaggcctgccgccacgccttccaggctcagccccagagg
ctcatggctgccatatatacctgcgagataatggccactgctgaggtgctgggccgagta
tatggcgtactggggaagcgagagggtcgtgtcctccatgaagagatgaaggaagggacg
gacatgttcatcatcaaggccgttctgcctgtggccgagagctttggatttgcagacgag
atccgcaagaggaccagcggattggccagtccacagctggtcttcagccactgggaggtg
atcagcagcgacccatgctgggttcccaccacagaagaagaatacctgcacttcggggag
aaagccgactctgcaaaccaggccctgaaatacatgaacgctgtccgccgccgcaaaggc
ctctacgtggaggagaagatagtcgagcacgcagagaagcagagaacactcggcaagaac
aagtag
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