Sander lucioperca (pikeperch): 116050816
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Entry
116050816 CDS
T07345
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116050816 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116050816 (dhx36)
03012 Translation factors [BR:
sluc03012
]
116050816 (dhx36)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116050816 (dhx36)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116050816 (dhx36)
Translation factors [BR:
sluc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116050816 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
116050816
NCBI-ProteinID:
XP_031156887
Ensembl:
ENSSLUG00000018490
UniProt:
A0A8C9ZTT3
LinkDB
All DBs
Position
5:11589426..11619676
Genome browser
AA seq
1075 aa
AA seq
DB search
MSCGYGGGGGRRGRRGGRGNRDGSRERWDRGGGGGSRGHSSDFDQDRGGGGRGGQRDRPP
PHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNDQPGPWRDGR
DARASTSDSWRTAANSSGHCYFDGDVSEEEKQKIELKSEEEEEEVTPGQKKATHKSQRYF
SPAVVKDEPPEAWDEEEQQQEEEEEEEKEKLRREDKDLEFLFQEVARNSSLDDSLKRDLQ
SKESDPKYKEMLKFREKLPSYGKKEELVQLINSNRVLVVSGETGCGKTTQVTQFILDDYI
NRGVGSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSVLY
CTTGIILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVKNLLNFRDDLKIILMSATL
NAEKFSKYFDNCQIIHIPGLTFPVREFLLEDIVEMTRYRSQNRDRRPSWKKGFWQGRHTR
PEKEEKEAEYKESWPSYARTLQDRYSDNTIEALEMLDNDEKIDLELIVALIRHIVLNEEE
GAILIFLPGWAEISSLNDLLTAQKMFQSDRFVIIPLHSLMPTVNQTQVFKKPPPGIRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTNNNISTMTAEWVSLANAKQRKGRAGRVCP
GQCYHLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIAQFLEKALDPPTEKAVN
LAIKNLIDLNALDRSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFK
DPFFIPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWVEAKQRGARYEREYCWDNFLSA
NTLQMLHNMKGQFAEHLMRTGFVSSRDPKDPTSNVNSDNEKLIKAVIVAGLYPKVAMIRP
TNSKKRPGVKVYTQADGKVCIHPKSVNAEETKFNYTWLIYHLKMRTSSIFLYDCTEVSPF
SLLFFGGDITIQKDEGQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKVRNPAPVN
WQNRQSKDCAVITAIIDLITTQEKPTGSTKGYDRTWAPAPRGQHMHFNDDDDDDD
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtggatatggcggtggaggagggagaagaggcagaagaggaggtcgagggaac
cgagatggaagcagagaaagatgggacagaggaggcggaggaggttcaagaggacacagc
tccgactttgaccaggaccgaggtggtggagggagaggcggacaacgggaccgtcctcct
ccacacctgaagggacgagagattggtctgtggtacgcaagatacggagccgtgaggagg
aaacaggctgaccgcagatcgcgggcagtggtccagatggatgaggccagagagcagcac
attaccaagctgcttaactctgtgcaaaatgatcagcctggtccttggagagacggcagg
gatgcaagagcctctacgtctgacagctggcggacagctgccaatagcagtggtcattgt
tactttgatggggatgtgtctgaagaggaaaagcagaagattgagttaaaatctgaggaa
gaggaggaagaagttactccaggccagaaaaaagctactcacaaatcacaacgttacttc
tctccagcagttgttaaagatgagcctccagaggcgtgggatgaagaagagcagcagcag
gaggaggaggaggaggaggagaaagagaaactaagaagggaagacaaggacctggagttc
ttatttcaggaagtagccagaaacagttcactggatgacagcttaaagagggatctgcag
agcaaggaatcggatccaaagtacaaagaaatgctgaaattcagggaaaaactaccatcc
tatgggaaaaaagaggagctggtgcaactgatcaactcgaaccgcgtcctggtggtgagc
ggggaaacggggtgcggaaagacaactcaggtcacccagttcatcctggatgactacatc
aacagaggcgtgggctcaatgtgtcgtgtggtctgcacgcagccgcgtcgcatcagcgcc
atctcggtagcagagcgtgtagcagcagagagggcagaaagtgttgggaatggaaattct
tgtggttaccagattcgcctgcagagccggttaccacggagacaaggttcggtcctgtac
tgtacaacgggcattattcttcagtggcttcgctcagacccattgttgtcaagtatcagc
cacctggtgttggacgagatccacgagaggaacctgcaatcggacgttttgctcgtcatt
gtgaagaacctactcaactttcgagacgacctcaagatcatcctcatgagtgccacgctc
aacgcagagaagttttctaaatattttgacaactgtcaaataatccacatccctggtttg
acgttcccagtaagggagttcttacttgaggacattgtggagatgaccaggtatcggtcc
cagaatcgtgaccgtcgcccctcatggaagaaaggcttttggcaggggcgccacaccaga
ccagagaaggaggagaaagaggctgaatacaaggagagctggcctagttatgcacggaca
ctgcaggacagatactctgacaacaccattgaggcactggagatgttggacaacgatgag
aagattgacctggagctgattgtggcactgattcgccatattgtgctcaatgaggaggaa
ggagcgatcttgatcttcctgcctggctgggccgaaatcagcagtctcaatgacctgctc
actgctcagaagatgttccaatcagaccggttcgttatcatccctttgcactccctcatg
ccaaccgttaatcagacgcaggtgttcaaaaagcctccacctggaattagaaagattgtg
attgctaccaatatagctgagaccagcatcaccatagatgacgtcgtttacgtgatagat
ggaggcaagattaaggagacccactttgacaccaacaacaacatcagcactatgacagca
gagtgggttagcctggccaatgccaaacagaggaaaggacgtgccggcagagtgtgtcca
gggcagtgctatcatctgtacaacggtctcagggccagcctgctggatgcctatcaatta
cctgaaatcatgaggacaccactggaggagctctgcctgcagatcaagatactgaagctt
gggtctatagctcagttcctggagaaagccctggaccctccaactgaaaaggccgtcaac
ctagccatcaagaacctcatagacctgaacgccctggaccgttcagagaatctgacggcg
ctgggtttccacctggctcgtctgcctgtggagcctcacattggcaaactcatcctgttt
ggagctctgttgggctgcctcgaccccgtactcaccattgctgcttcactcagcttcaaa
gaccctttcttcatccccctgggtaaagagaagatggcagacatgaggagaaagaccctg
tccagaaactccaagagtgaccacctcactattgtcaacgccttccagggctgggtggaa
gcgaaacagcgtggcgccaggtatgagagggagtactgctgggacaacttcctgtctgcc
aatacactccagatgctgcacaacatgaagggtcagtttgctgagcatctaatgcgtaca
ggctttgtcagcagcagggaccccaaagaccctacatctaatgtcaactcagacaatgag
aagttaatcaaggcggtaattgtagctggtctgtacccgaaggtggccatgataagacca
actaacagcaaaaagaggccgggggtcaaggtgtacacccaggctgatggaaaggtgtgc
atccaccctaaatcagtcaatgctgaagagactaagttcaactacacatggctcatctac
cacctcaagatgagaacgagcagtatcttcctgtacgattgcactgaggtgtccccgttc
tcactgctgttcttcggaggagacatcacaatccagaaagacgagggccaggagaccatc
gccgtggaccagtggatcgtcttcagatccccggcacgcatcgctcacctcgtcaagagt
ttaaagaaagagctggattctctgctggaggagaaagttcgtaaccctgctcctgtaaac
tggcaaaaccgtcagtccaaagactgtgctgtcatcacagccatcatagacctcatcacc
acccaggagaagcctacaggcagcactaaaggctatgacagaacgtgggcgcctgcccct
agaggacaacacatgcatttcaatgacgatgacgacgacgatgattaa
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