Sander lucioperca (pikeperch): 116050817
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Entry
116050817 CDS
T07345
Name
(RefSeq) rho guanine nucleotide exchange factor 26
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc05100
Bacterial invasion of epithelial cells
sluc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116050817
05100 Bacterial invasion of epithelial cells
116050817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116050817
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Macropinocytosis
Others
116050817
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116050817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
SOS1_NGEF_PH
RHG20_PH
PH
Motif
Other DBs
NCBI-GeneID:
116050817
NCBI-ProteinID:
XP_031156888
Ensembl:
ENSSLUG00000019288
LinkDB
All DBs
Position
5:complement(11620120..11651908)
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AA seq
1009 aa
AA seq
DB search
MDIGNDVDLSNENITPLWKRCTDNSKKKQDSSNPKPRPFSYHANGVMTTDFPVEDNKCSF
TLSQPAERLVVSPPTWGKNTVVLKHILHKPSKKSRVVRSISIGHFSNGLFSLSKFRSEDN
RSTSLDNRVRTGDGDRRKTSNGVTVWQEKHLQDSQKHMPSLFSVISQKDQKAFGMSSPSS
EAVPLNSSPVLSSRSPNNNNNNTYNHHELSSLSSASSPSPPALRTPTPSHSSTSSIPSLS
SLTSSDPSTPRSPSPADRGQALLRPSLFSPASSQDARHASFSSSTSSTSPSPSLSPCISP
SPSIVLSTHSPAALKMGTQQLIPKGLASDVRQCKAPASEPQVQGLTGLLGLDHSKRALKA
LSMVETGTYFSTGGGHIEGTDGESESPGTLRRGLRSTSYRKAVVSGVDLEVPSVDPKAHW
LSQSVIKWPDEDKPDSPISPASPGTVSLTSPGTAKPASPGTPKIASPGTPKLASPRISKP
ASPGTKKPTNTGKNTCPDKKKALTSQRTFDSEEEELYQNYQEKALHNDSDEDADSREDKP
DNGIVLQYRPIRISWSQLSVVKKRGLSDRMSQEERKRQEAIFEVISSEHSYLHSLEILIR
MFKNSADLSEAMTKTEHHHLFSNITDVCEASKKFFKELEERHQQNIVIDDISDIVDKHAQ
SNFDPFVTYCSNEVYQQRTLQRLVSKNPVFKEVLTKIESHPDCRNLPMISFLILPMQRIT
RLPLLMDTICQKTPKDSAQYEDCKKALQAVSKVVRKCNEGARTMERTEMMYTINSQLEFK
IKPFPLVSSSRWMVKRGELTAFVEDNGIFLKRTSRQQVYFFLFNDVFIVTRKKSEDSYTV
IDYALRDQIWVSSCQPEDLNLSPVRSTASMLSSRQAGANHLFRLRFRSNHSGEKVPMILG
TELLNERARWISALGQNVNNNKSQDRTNVMQVEVIRTYTAKQPDELSLQVADVVLVSQTV
EDGWYEGERLRDGERGWFLAECAEPITCQATIERNMQRMDRLQGLETNV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggcaatgatgtggatctgtccaatgaaaacatcaccccactgtggaaacgc
tgcacggacaattctaagaaaaaacaggactcaagcaaccccaaaccgcgacccttcagt
taccacgcgaatggtgtcatgacgacggacttccctgtggaagacaacaagtgctccttc
accttgagccaacctgccgagaggctggtggtctcacccccaacttggggcaagaacact
gtggttttgaagcacattctgcacaaaccctccaagaaatccagagttgtccgaagcatc
agcatcgggcacttctccaacggactcttctcactgtccaaatttaggtctgaggataac
agatccacctcactggacaacagagtgcgaactggagacggtgacaggaggaaaaccagt
aatggcgtgacagtatggcaggaaaagcatctccaggactcccagaaacacatgccgagc
ctgttcagtgtgatctcacagaaagaccagaaagcgtttgggatgagttccccctcatct
gaagctgtgcctctgaactcctctcctgtcctgtcctcacgctctcctaacaacaacaac
aacaacacatacaaccaccatgagctgtcctctctttcgtccgcatccagtccctctcct
ccagccctgcgtacccccacgccatcccacagctccacctccagcatcccctccctctct
tcccttacctcctcagacccctcgaccccacgctccccgtcgccagcggacagaggacaa
gcactccttagaccgtccttattctcgcctgcctcctcacaggacgccaggcatgcctct
ttctcttcctccacctcctctacatcaccctctccctcactttccccatgtatctctccc
tctccctcaatcgtcctcagcacccacagccctgctgccctgaagatgggcacccagcag
ctcattcccaagggtttagcatctgatgttcggcagtgcaaggcgcctgcctctgagccg
caagttcaaggtttgacagggctgctggggttggatcattccaagcgagcgttgaaagcc
ctcagcatggtagaaacgggaacctacttttctaccggagggggccacatcgaaggaaca
gatggggaaagtgagagcccggggacactaagaagaggcctgaggagtacgtcctatagg
aaggcagttgtgagtggagtagacttggaggtcccatcagtagatcccaaggcccattgg
ttgtcacagtctgtcatcaaatggccggatgaggataagccagattcaccaatcagtcca
gcaagtcccggcactgtaagtctcactagccctggaactgccaagcctgcgagtcctggc
acacccaaaattgccagtcctgggacacccaaactggccagccccaggatttcaaagcct
gccagccccgggacaaaaaagcctaccaacactgggaaaaacacgtgtccagataagaag
aaagctttgaccagtcaacggacgtttgacagtgaggaggaggagctgtaccagaactat
caggagaaggccttacataatgactcagatgaggatgccgattccagagaagacaaacct
gataacggcatcgtgttgcagtacagacctatacgcatctcctggagccagctcagtgtg
gtcaagaaaaggggtctttctgaccggatgagtcaggaggaacgcaaaagacaagaggcc
atttttgaggtgatctcgtcggagcactcttacctccacagtctggagatcctgatccgc
atgttcaagaattctgcagacctcagcgaggccatgaccaagaccgaacaccaccacctc
ttctctaacatcaccgacgtctgtgaggctagcaaaaagttctttaaggaattggaggaa
agacaccaacagaacatcgtgatcgatgacatcagcgacatcgttgacaagcatgctcag
tccaactttgaccccttcgtcacgtactgctccaacgaggtctaccagcagagaaccctt
cagaggctggtgtccaagaatccagtttttaaggaggtcctgaccaagatagagagccac
ccagactgcaggaacctccccatgatctccttcctcatcctgcccatgcagaggatcact
cgcctgcccctgctcatggatacaatttgtcagaagacacctaaagactctgcacaatat
gaagactgcaagaaggctttacaagcagtcagcaaggtggtaagaaagtgtaatgaagga
gctcgcacaatggagagaacagagatgatgtatactatcaactctcagctggagtttaag
atcaagcctttccccctggtctcctcctccaggtggatggtaaaaagaggagagctgact
gcgtttgtggaggacaacggcatcttcctcaagcggacgtcacggcaacaggtctatttc
ttcctcttcaatgacgtcttcatcgtcaccaggaagaagagcgaggacagttacactgtg
atcgactacgctctgagggaccagatctgggtgagttcctgccagcccgaggatctcaac
ctgtcaccggtcagaagcaccgccagcatgctgagctcacggcaagccggcgccaaccat
cttttccgtctgcgtttccgtagcaaccactccggtgaaaaggtgcccatgatcctgggg
acggagttgctgaatgagcgtgctcggtggatcagcgctctgggccagaatgtcaataac
aacaagagtcaggacagaaccaatgtcatgcaggtggaggtgatcagaacttacacagcc
aagcagccagatgagttgtctctgcaggtggctgatgtggtgctggtctcgcagactgta
gaagacggctggtatgaaggcgagcgactgcgcgacggagaaagggggtggttcctcgcc
gagtgtgccgaaccaatcacgtgccaggccaccatcgagcgcaacatgcagaggatggac
cgcctgcaagggttggagactaatgtgtga
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