Sander lucioperca (pikeperch): 116050837
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Entry
116050837 CDS
T07345
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116050837 (smc4)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116050837 (smc4)
Condensin II
116050837 (smc4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
APG6_N
AAA_29
Laminin_II
THOC7
HIP1_clath_bdg
TPR_MLP1_2
ERM_helical
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116050837
NCBI-ProteinID:
XP_031156921
Ensembl:
ENSSLUG00000019786
LinkDB
All DBs
Position
5:12369219..12389888
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AA seq
1296 aa
AA seq
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MPSKTAKSSTAKPRGKGSQPRDDSEDELDVPPQETNSNGQEEAPPTTDPSLGEAAEAVDN
RSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIGPN
GSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKIIDKEGDDY
EVIPNSKFYVARTANKDNSSAYHINAKKATFKEVGALLRSHGIDLDHNRFLILQGEVEQI
AMMKPKGQTEHDEGMLEYMEDIIGSCRLKEPILTLARRIELLNEQRGEKLNRVKLVEKEK
NALEGEKNKAVQFLTLENDIFKHKSQLWQYYVHDLQKRTVDKGQEKQKILEDTKELTEKN
EKISQETEKMNQELKNVEKKQNKLSKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKKLQ
KQLEKDKEKLEEVRGVPASSEKAISEATACKEELEKQKVKEEKKLEEVMESLKEETSGLQ
QDKETKEKELMELSKAVNETRSRMDLAQSELDIYLSRHNTALMQLNTAKQTLQTTSDTLR
ERRAAIKDLEVKIPQKEQELKKDEAALEQLMKMDNETREVVREIRQKVDEAKSSLSSNRS
RGRVLDALMQQKKSGRIPGIFGRLGDLGAIDEKYDVAISSSCGALDNIVVDTIDTAQKCV
MFLKEQNIGFATFIGLEKMKVWERNMAPIRTPEDSPRLFDMVRVKDESVRPAFYFALRDT
LVAQDMEQATRMAFQKDKRWRVVTLKGQIIEMAGTMTGGGRALKGRMGSSIGTEVSQEEL
DRMESKLNEKVLKLQGCQEKRLQLEENIQRLRPELRDMKNTLEKYANSMASLADQEAHLK
LQIKELEANVLAAAPDKAKQKQMEKSLDAFKKDYDAASSKAGKVENEVKRLHNLIVDINS
HKLKAQQDKLDKINKELDDCSSTITKAKVAIKTADRNLKKCEESVKRVQGELEDIEKSLA
ELTEQLKKLEDEAGEVMKACQEAEAALPEVQEQYQGVLKEIKVLQQQEHAMQEESLSVRL
RIEQIETTITDYNSKIKHWQKEATKLSLHTIEGNPAEELPVLTSTELEEIASPNVIINQI
STLETKCAQMKPNLGAIAEYKKKEELYLQRVAELDEITNQRDQFKRGYEDLRKQRLNEFM
TGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEK
TLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMF
EIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAITA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagagctcaactgccaagccaagagggaaagggtcgcagcct
cgggatgactccgaagacgagctggatgtaccccctcaagaaaccaactccaatggccaa
gaggaggcaccgccgacaactgatccgtctctcggggaagctgccgaggcggttgataat
cgaagtttggaggagattctcggtagcatccctccacccccgcccccagcaatgaccaat
gaaccgggcgctcctcgcctgatgataacacatttagttaatcgcaattttaaatcttat
gcaggcgagcagattctggggccttttcacaagcgcttttcgtgcatcattggtccaaat
ggcagtgggaagtccaatgtgatagattcaatgctgtttgtgtttggatacagagcacaa
aagatcagatcgaaaaagctctcagtactgattcacagctctgataaacataaggatgtg
caaagctgtactgtggaagtgcattttcaaaagattattgataaggaaggagatgactac
gaagtcatccccaacagcaagttctatgttgccaggactgccaacaaagacaattcctca
gcctaccatatcaatgccaagaaagccacattcaaagaagtgggggctttactccgaagc
catggtattgacctagaccacaacagatttctgatcttacagggtgaggtggagcagatt
gccatgatgaagcctaaaggccaaacagagcatgatgagggcatgctggagtacatggag
gacattataggctcctgccgcctcaaggagcccatcctaaccctggcccgccgcattgag
ctactcaatgagcagaggggagagaagctaaaccgagtaaagctagtggaaaaggagaag
aatgctttggagggagaaaagaacaaagctgtgcagttcctcaccctggagaatgacatc
ttcaagcacaagagtcagctctggcaatattatgttcatgatctgcagaagcgtacggtt
gataaaggacaggagaagcagaagatcttggaggacaccaaggaactcactgagaaaaat
gaaaagatatcacaggagacagagaaaatgaaccaagagctcaaaaatgtggagaaaaaa
caaaataagctcagcaagtacattgagacacagaaggagaagttcacccagctggacctg
caggatgttgaagtgcgtgagaagattaaacactccaagagcaagaacaagaaactgcag
aagcaactggaaaaggacaaagaaaagctggaggaagtgcgcggtgtaccagccagcagt
gaaaaggccatctctgaggcaacagcttgcaaggaagagctggagaagcagaaggtgaaa
gaagagaaaaaacttgaggaggtgatggagagtctgaaggaagagaccagcggcttgcag
caggacaaagagaccaaagagaaagagctgatggagctcagcaaggctgtaaatgagacc
cgttctcgtatggacctggctcagtcggagcttgacatctaccttagccgccacaacaca
gctctgatgcagctcaacacagccaagcagacacttcagacaacctctgacacgctgcgt
gagcgccgtgccgccatcaaagacctggaagtcaaaataccccagaaagaacaggagctc
aaaaaggacgaggcagcattggagcagctgatgaagatggataatgagactagggaagtg
gtgagggaaataaggcagaaggtggatgaagccaaaagctctctgtcctctaaccgcagt
cgaggaagggtcctggatgccctcatgcagcagaagaagagtggcagaatccctggcatc
tttggaagattgggagaccttggagccatagatgaaaagtatgatgtggccatttcctct
agttgtggcgctctggacaacatcgtggtggataccattgacacagctcagaaatgtgtc
atgttcctcaaagaacagaacatcgggttcgcgaccttcattggtcttgaaaagatgaag
gtttgggagaggaacatggctcccattcgcactccagaggacagccctcgtctctttgac
atggtgcgtgtgaaagatgagagtgtgcgaccagctttctacttcgccctaagggacact
ctggtggcccaggacatggagcaggccacaaggatggccttccagaaagacaagcgctgg
cgagtggtcaccctgaagggacagatcattgagatggctggaaccatgactggaggagga
agagcattgaagggcaggatgggctcctctattggcacagaggtctcccaggaggagctt
gaccgtatggagagcaagctgaatgagaaagtgttgaagctgcagggctgccaagagaaa
aggctgcagctagaggagaacatccagcgcctgcgaccagagctcagagatatgaagaac
accctggaaaaatacgccaacagcatggctagtctagctgatcaggaggctcacttgaaa
ctgcagatcaaggaactggaggccaatgtgctggctgctgccccagacaaggccaaacag
aaacagatggagaagagcctggatgccttcaagaaagactatgatgctgcgtccagtaag
gctggcaaggtggaaaatgaggtgaaaaggctccacaacctgattgtagacatcaatagc
cacaagcttaaggctcagcaggacaagcttgacaagattaacaaggagctagatgactgc
tcctccaccataaccaaggccaaagtggccataaagactgctgaccgcaacctgaagaag
tgtgaggagagtgtgaagcgtgtgcagggtgagctggaggacattgagaagtcattggct
gagctcaccgaacaactgaagaaactggaagacgaggccggcgaggtcatgaaggcctgt
caggaggctgaggcggcacttcctgaggtgcaggagcagtatcagggggtgttgaaggag
ataaaggtcctgcagcagcaggagcacgccatgcaggaggagtccctcagcgtccggcta
cgcatcgaacagatcgagaccaccatcaccgactacaacagcaagatcaaacactggcag
aaagaggccaccaagctatcccttcataccattgagggcaatccagcagaggaacttcct
gttcttacttctaccgaacttgaagaaatcgccagccctaacgtcattatcaaccagatc
tcaacgttggagaccaagtgtgctcagatgaagcccaacctcggggccatcgctgagtat
aagaagaaggaggagctgtacctgcagcgcgtggccgagctggacgagatcactaaccag
agggaccaattcaaacgcggctacgaggacctgcgcaaacagcgcctcaacgagttcatg
accggattcaacatgatcacaaacaagctgaaggaaaactaccagatgctcacactgggt
ggtgatgcagagttggagctcgtggacagtttagatcccttctctgagggaatcatgttc
agtgtgcgtccaccaaagaagagctggaaaaagatcttcaacctgtcagggggggaaaag
accctgagctccttggctctggtgtttgctctgcaccactacaaacccacaccgctctac
ttcatggacgagatagacgccgctctcgattttaagaacgtctccattgtggcctgttac
atttatgagcaaacaaagaacgctcagttcatcatcatctccctgaggaacaacatgttt
gagatcgctgatcgtctcatcggcatctacaaaacccacaacaccaccaagagtgtggga
atcaaccccaagaccattgtgtttaaagagcatgatgccatcactgcttaa
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