Sander lucioperca (pikeperch): 116051044
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Entry
116051044 CDS
T07345
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116051044 (sbno1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116051044 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116051044
NCBI-ProteinID:
XP_031157134
Ensembl:
ENSSLUG00000018463
LinkDB
All DBs
Position
14:12984955..13011987
Genome browser
AA seq
1402 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDIGLFDVDSQDVAQPSTTQQSISISALDVGVGTESVEGVR
TELPAPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGAAVTKQSVTNPIKHTITVTKVVHVA
NSALRGSSNPSSSIPPSASTVVPSNRDQQIQLRDLLRTGNVKTTGLKGNSLMELMKLKPP
PNIAPPVATATATGEMNNGIKKEVLGKDAPRIWNNDDIKMQTFSHSLKIPGMKEEDEPEE
EEEDELGHAETYAEYMPMKLKIGLRHPDPVVETSSLSSVNPPEVWYRLSIPEEVIDRGSL
SALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFS
VSNDLKYDAERDLKDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS
GGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKAR
VVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKLRGM
YIARQLSFTGVTFKIEEVPLTQKYINMYNKSVRLWVTARERFQQAANLMDAEQRMKKSMW
GQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGGGEL
NDFVSTAKGVLQSLVEKHFPAPDRQKLYSLLGIDLPTKKTPAPSDTAAQPEPKGKKRKGS
EIKKQQKKKPRKHGGLSGTSSEESQSDESDRESGKDSDDSFKSVSSGDEDDDFNPFRDES
DGDEEDDPWLIRKEPKKGKEKKKKKRKKSIDPDSIQSALLASGLGSTRPAFTAPVIPVST
PAIVKAESQDSCLTSQDAVEHAQKMKRELLEKLEELAEDLPPNTLDELIDELGGPENVAE
MTGRKGRVVSNDDGTITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISLQ
ADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIV
AKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDSPLVSPPSNFKG
DFFKEIQSGLIGVGLINLEDRSGAMSLDKDYNNMGKFLNRILGMEVQQQNALFQYFSDTL
AAVIQEAKKNGRYDMGILDLGSGDEKVKKVDCRKFLTPGYTTSGHVELFTVSVERGMSWE
EATHAWAEQNGPDDGFYVQMRNNKKTAILVKEVNNKKRLFLVHRPNTGRQLKLETYADIK
KKFKKVLSEDAKQHWTDQYKLSAKICAHAYWRGNCKKASVGLQCEVGLRCRSYYVLCGSV
LSVWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLCNKLSTSDQCQQL
AVQELQKLQQLHPQSLSHAPNT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttacttcttgctgccctaagtgagagtggcatttgtccgaat
gatattggcctatttgatgttgattctcaggatgttgcacagccctctacaacccagcaa
tctatctccatcagtgccctggatgttggtgtggggacagagtcagtggaaggtgttcga
actgagcttccagctccagtccctatagttactatcaggcacaaacctcagccatcaacc
accacgtttgtcttaaatcagctgaatcagttgccgtcactaggagctgctgtgaccaaa
caatcagttacaaaccctatcaaacataccattactgtcaccaaagtggtccatgttgct
aattcagccctgcgaggttcttcgaacccctcctcgagtattcccccttcagcatccaca
gtagtgccttccaacagagatcagcagattcagttgagagacctccttaggaccggcaat
gtgaagaccactggtctaaagggcaacagtctgatggagctcatgaagctaaagcctcca
cctaacattgctccaccagtagcaacggcaacagccacaggtgaaatgaacaatgggatc
aagaaggaagtattgggtaaagatgctcccaggatctggaacaatgatgacattaaaatg
caaactttctcacattctctgaaaatcccagggatgaaggaggaggatgagcctgaggag
gaagaggaagacgagttgggtcatgcagagacttatgcagagtacatgccaatgaaatta
aagattggcctgcggcatcctgatcctgtggtggagaccagttccctgtccagtgtgaac
cctccagaggtgtggtacagactgtccatcccagaagaagtcattgatcgtggctccctg
tctgctctgcagctggaggcaataacatatgctgctcagcaacacgagacattcctcccc
agcggggatcgagctgcctatttgattggagatggagctggtgttggcaaaggccgcacc
attgcagggatcatctatgagaattaccttttaggcaggaaaagatcactttggtttagt
gtctcaaacgacttgaagtatgatgctgaaagggatttaaaggacataggagccaaaaac
atccaggttcactcactgaacaagttcaaatatggcaaaatctcctcaaaacacaatggg
agtgtgaagaaaggtgtgatattcgccacctactcttccttgataggagagagccaatca
ggagggaagtacaagaccagatttcaacagcttctccactggtgtggggaggacttcgat
ggagttattgtttatgacgagtgtcacaaagccaaaaatgtatgtccaattggatcatcc
aaaccaacaaaaactgggcttgcagtgttggaactgcagaacaaacttcccaaggctcgg
gttgtgtatgcaagtgctacaggtgcctctgaaccgcgaaatatggcctatatgaatcgt
ctgggcatctgggggcataaaacacccttcagagaatttggcaactttatccaagctgtt
gaacgaagaggtgttggcgccatggagatagtagctatggacatgaaactgaggggcatg
tacattgcaaggcagttgagttttacaggtgtgacttttaagatcgaggaggttcccctg
actcagaaatacatcaacatgtacaacaaatctgtgaggctgtgggtgacagcacgtgaa
aggttccagcaggcagcgaacctgatggatgcagagcaacgcatgaaaaagtccatgtgg
ggccaattctggtctgctcaccagaggttcttcaaatacctgtgcattgcctccaaagtc
cgcagagtggttcagctggcccgagaggaggtccaaaatggaaagtgtgtggtgatcggt
cttcagtccactggagaagcaagaacacttgaggccttggaggaaggaggaggggagctc
aacgactttgtgtcaactgcaaaaggtgtgctgcagtccctggttgagaagcactttcca
gctcctgacagacagaagctttacagccttctaggtatcgacctcccaactaagaagacg
cccgctcccagtgacactgcagcacaaccagaaccgaagggcaagaaaagaaaaggttct
gagataaaaaagcagcagaaaaagaagcctcgcaagcacggtggtttgtcgggtaccagc
tcggaggagagccagtcggacgagtcggacagagagtctggtaaagacagcgacgacagc
ttcaaatctgtcagctcaggggacgaagacgacgatttcaacccattcagagacgagtcc
gatggcgatgaggaagatgatccatggctcatcagaaaggaaccaaagaaagggaaagag
aagaaaaagaaaaagagaaagaagagtattgatccagactccattcaaagtgccttgtta
gcctctgggctgggctccaccaggccggctttcactgcccccgttattcccgtcagcaca
ccggccatagtcaaggcagagagtcaggatagctgtctaacaagtcaggatgcagtggaa
catgcccagaaaatgaagagagagctgctggaaaaacttgaggaactagctgaggatcta
cctcccaacactctggacgagctaatagatgaactgggaggacccgagaacgtagctgag
atgactggacgcaaaggtcgtgtggtcagcaatgacgatggcaccatcacgtatgaatct
cgctctgagctggatgtcccggtagaaatcctcaatctcacagagaagcaaaggttcatg
gatggagagaagaacatagccatcatctcggaagctgccagctcaggtatatccctacag
gccgatcgtcgagtgaagaaccagcggcggagagtccacatgacactagagctaccgtgg
agtgcagacagagctatacagcagttcgggagaactcacaggtcgaaccaggtcacagcc
ccagaatacgtcttcctcatatcagagcttgcaggagagcagagatttgcatccatcgtt
gccaaaagactagaaagcttgggtgctctcactcacggggacagaagagcaacagaaact
cgagatctcagcaggtttaattttgacaacaaatacggcagaaacgctctggaaattgtg
atgaagtcaattgttaagcttgattctccgttagtgtctccaccctctaactttaaaggc
gatttcttcaaagaaattcaaagtggattaataggtgtgggcctcataaatttggaggac
agatctggggcaatgtcactggacaaagattacaacaacatggggaagttcctgaaccgt
attttgggcatggaggtccagcagcaaaatgccttgttccagtacttttctgacacgttg
gcagcagttattcaggaagccaagaagaatggcagatatgacatgggcattctcgatctg
ggctctggtgatgagaaggtgaagaaggtagactgcaggaaattcctaacaccgggctac
actacatcaggacatgtggaactcttcaccgtgagtgtggagagggggatgtcgtgggag
gaagccacacatgcttgggcagaacagaatggaccagatgatggtttctatgttcagatg
aggaacaacaagaaaacagccatactggtcaaagaggtgaacaacaagaagaggctcttc
ctggttcacaggcccaacaccggcagacagctcaaactggagacctatgcagacatcaag
aagaagtttaaaaaggttttgtcagaagacgccaagcagcactggactgaccagtacaag
ttgtcagcaaagatctgcgctcatgcatattggcggggtaactgtaagaaagcatctgtg
ggtcttcagtgtgaagttggccttcggtgtcggtcgtactacgttctgtgtggctccgtg
ctcagtgtgtggaatgagctggaggaagtgctaactccagtcagtggaaccaatgtgaag
gtgcagattgtccgcctcagaacagaagatggacagagaatagttggactgatcattcca
gcaaactgcgtgtctcctttatgtaacaagctctcaacgtcggaccagtgccagcagctc
gctgtgcaggagctgcagaaactgcagcagcttcatccccaaagtctcagtcatgcaccg
aacacatag
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