Sander lucioperca (pikeperch): 116051164
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Entry
116051164 CDS
T07345
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc02010
ABC transporters
sluc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116051164
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116051164
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116051164
Transporters [BR:
sluc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
116051164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
NLRC4_HD2
NACHT
ABC_tran
NOD2_WH
FISNA
AAA_21
Motif
Other DBs
NCBI-GeneID:
116051164
NCBI-ProteinID:
XP_035862188
LinkDB
All DBs
Position
1:complement(5165152..5319223)
Genome browser
AA seq
2406 aa
AA seq
DB search
MEVKEKETPHSSVVRDDEDIQCDEEEKLPLDAGERASESLSRARAADMSVSTQLGLLLWK
NFTYRRRRMLQLLVEIIWPLLIFFILIMVRLNYPPYEQHECHFPNKAMPSAGTLPWLQGI
LCNADNPCFRSPTPGESPGVVGNFNGSIFSRISRMFSDAKKILLYIQNDKSLEGFQELVQ
ALKVLQESRKGFKLKDFLRDGETLSTFLKNTKLLYENDVPLIMDANVNLEKVLLKGFGVH
LRDMCPRKGSKHAVKDFVTISDPWASWQVEKVICEEPASWLDHAEEIFLNNLDFLKPIKR
DVTSAPEAVKLVVRATNNLLDSLGSLMVELAGMNSWVDLRKEIIFLTQNATSSPSSMYQA
VSRIVCGHPEEGGRQIKSLNWYDDSSYKALFGNHGNSNEDEPAALYDNSSTPYCNSLVQS
MDSNPMSRMIWQTLKPLLLGKILYTPHTPATQRVIHEVNRTFQELSVFRDLGGMWEEMRP
KVWKFMENSEQMDLLRTLLKNNVTASFFRDQLSGTDWTVADVSYFLSKQAPDPRRPGGAV
TWREVFNETDQAIMSISRFMECVNLDKLEPVSSEERLVNRSMVLLEDRKFWAGIVFLDVE
PNATELPTKLNYKIRMDIDNVERTNKIKDAYWDPGPRDDPFEDMRYIWGGFSYLQDVIEQ
GIIRAMTGTKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIILKSVVYE
KEAWLKETMRILGLNNGILWVSWFISSLIPLLVSAGLLVLLLKVGNLLPYSDPGVVFLFL
GSFAVVTIMQCFLLSTAFAHANLAAACGGIIYFTLYLPYVMCVAWQDYFGFGAKVFASFL
SPVAFGFGCEYFALFEQQGVGIQWKNLVSSPLEEDDFSLRTAIIMMYVDSFLYGVLTWYI
EAVFLGQYGIPRPWYFPLSKSYWFREKEGKSNSFPLSRRGNPEAVNIEEELAHLQPSVYI
EEELAHLQPSVYIENLVKVYRHGKKLAVDGLTLGFYEGQITCFLGHNGAGKTTTMSILTG
LFPPTSGTAYILGRDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYGRLKGLSEQQV
KDEIEQILQDTELLHKRSARANELSGGMQRKLSVALAFVWGSKVVILDEPTAGVGPYTRR
VIWDLLRKYRPGRTIILSTHHMEEADILGDRIAIISHGKLCCVGSSLFLKNQLGTDYFLK
LEKKELEPSLSSCRNCCTVSFNKKEESSEHESEAAAIETRETDRLSCSDRKGPYQVKGWS
LKQQFVDLMWKRFLNARRSLKGFFAQIVLPVVFVFIALVFSLIVPPFGKYPSLELQPWMY
EDQVTFISDDSPGDSNMQKLLGALLDAPGFGTRCMDGHPIPEAPCTMGDDDWRTPEVPGS
ITQLFSSSNWTMDDPSPACICSYDGQKKMLPDCPAGAGGLPPPEMKLSTTDSLQNLTGRN
ISDYLVKTYADIIGKSLKNKVWVNEFRYGGFSLGARSTQVLPPANEVDDAIERIRKIFEL
QKGAAADRFLDSLSGFINGLDTTNNVKIWFNNKGWHSIGAFINVMNNAILHANLPPGRNA
SRYGIRAFNHPLNLTKEQLSQVALVTTSVDVLLSIFVIFAMSFVPASFVVFLIQERVSKP
KDMQFISGVQPLLYWVANFFWDMCNYIVPATLVIIIFISFQQKAYVSSTNLPVLVLLLLL
YGWSITPLMYLASFFFKIPSTAYVVLTSINILITINCSISTFIMELFGNNEIGGINIIQK
NVLLIFPHFCLGRGLIDMVKNQAMADALQRFGENRFRSPLEWDMVGKNLFAMAVEGVVFF
IITILIQYRFYIKPRPICTLTKLGALGEEVFKRKQKPAMDRLCVGIPPGEMFTEIYITKG
GTAGVNDEHEVRQIETASWKPDGPETTIKQEDIFQTPPGRNEPIRTVMTMGVAGIGKTVL
TQKFTLDWAEGKANQDIQFTFPFTFRELNVLKEKKYSLVELVHYFFSETKEAGICRFEEF
PVVFIFDGLDECRLPLDFLNTETLTDVTKSTSVDVLLTNLIRGKLLPSARLWITTRPAAA
NQIPPECVDMVTEVRGFTDQQKEEYFRNRFRDKKKASRIISHIKTLRSLHIMCHIPVFCW
ITATVLEDMLKTREGGELPKTLTKMYIHFLVVQSKVKNIKYDRGGETDPHWSPESRKMIK
SLGKLAFKQLQKGNLIFYESDLTECGFDIKAASVHSGVFTQILKEESGLSQDTVFSFVHL
SVQEFLAALHVHLKFIKSGVNLLSEEQTTTTTTTSTTCFYQSAVDKALQSPNGHLDLFLR
FLLGLSLQTNQTLLGLLTKTGNSSQTNQETVKYIKKKISEDLSAERSINLVHCLNELNDR
SLVKEIHQSLRSGSLSTDKLSPAQLSALVLLSSDEDLDVFDLKKYSASEEALLRLLPVVK
ASNKAL
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaagaaaaggaaacaccacattcatctgtagttagagatgatgaagacatc
cagtgtgatgaagaagaaaagttgccacttgatgctggagagagagcgagcgagtcttta
agcagagcgagggctgcagacatgtccgtctccacccagctgggtctgttgctgtggaag
aacttcacctacagacgacgacggatgcttcagctcctggtagagatcatctggccgctc
ctgatcttcttcatcctcatcatggttcgcctcaactaccctccgtacgaacagcacgaa
tgtcattttcccaacaaggcgatgccgtcggccggcacgttgccatggctacagggaatc
ctctgtaacgctgacaacccgtgcttcaggagcccgacgccgggcgagtctccgggcgtc
gtcgggaacttcaacggctccattttttccagaatatctcgaatgttttcggacgccaag
aagattcttctgtacattcagaacgataaaagcctggaaggatttcaggaactcgttcag
gctctcaaggttctgcaggagagccgaaaaggattcaagttgaaggacttcctgcgggac
ggtgagactctgtccacgttcctgaaaaacactaaactactctatgaaaacgacgtcccg
ctgatcatggacgccaatgtcaacctggagaaggtgctcctgaaggggttcggcgtccac
ctgagggacatgtgtcccaggaagggcagcaagcatgccgtgaaggactttgtgacgatc
tcggacccttgggcatcctggcaggtagagaaagtgatctgtgaggagccggccagctgg
ctggaccacgctgaggagatcttcctcaacaacctggacttcctgaaacccatcaagagg
gacgtgacgtccgcccccgaggccgtcaagctggttgtcagggcaaccaacaacctcctg
gacagtctgggttcgctgatggtcgagctggccggtatgaacagctgggtggatctgagg
aaggagatcatcttcctgacccagaacgccacgtcgtctcccagctccatgtaccaggcc
gtctccaggatcgtgtgcggacacccagaggaggggggccggcagatcaaatccctcaac
tggtacgatgacagcagctacaaggcgctgttcggtaaccatggcaacagcaacgaggac
gagccggctgccctctacgacaactcctccactccctactgtaacagtctggtccagagc
atggactctaacccgatgtccaggatgatctggcagactctgaagcctctgctgctgggg
aagatcctgtacacgccccacacccccgccacccagagggtcatccacgaggtgaaccgg
accttccaggagctcagtgtgttcagggacctgggcgggatgtgggaggagatgagaccc
aaagtctggaagttcatggagaacagcgagcagatggacctgctccggactctgctgaag
aacaacgtcaccgccagcttcttcagagatcagctgagcggcaccgactggaccgtcgcc
gacgtctcctacttcctgtccaagcaggcaccggacccccgcaggccgggcggtgccgtc
acctggagggaggtgttcaacgagacggaccaggccatcatgagcatctcccgcttcatg
gagtgtgtaaacctggataaactggagcctgtctccagcgaggagcggctggtgaaccgg
tccatggttctgctggaggacaggaagttctgggcggggatcgtgttcctggacgttgag
cccaacgccaccgagctgccgaccaaactcaactacaagatccgcatggacatcgacaac
gtggagaggaccaataagatcaaagatgcgtactgggaccccggtccccgggacgacccc
tttgaggacatgaggtacatctggggtgggttctcgtacctgcaggacgtcattgagcaa
ggcatcatcagagccatgacgggcaccaaggagaagacgggcgtctacatccagcagatg
ccctacccctgctacgtagacgacatcttcctgcgggtgatgagccgctccatgcctctc
ttcatgacgctggcctggatgtactcggtggcgatcatcctgaagagcgtggtgtacgag
aaggaggcgtggctgaaggagaccatgaggattctgggattgaacaacggcatcctgtgg
gtcagctggttcatcagcagcctgattcctctgctggtcagcgccgggctgctggtgctg
ctgctcaaggtggggaacctgctgccctacagcgaccccggtgtggtcttcctcttcctg
ggatcctttgccgtggtaaccatcatgcagtgcttcctcctcagcacggcattcgcccac
gccaacctggcggccgcctgcggagggatcatctacttcacgctctacctgccctatgtg
atgtgtgtcgcctggcaggactacttcggcttcggagccaaagtcttcgccagcttcctg
tcccccgtggcgttcgggtttggctgcgagtactttgccctgttcgagcagcagggggtc
ggcatccagtggaagaacctggtgtccagtcctctggaggaggacgacttcagcctccgc
accgccatcatcatgatgtacgtcgactccttcctctacggagtcctcacctggtacatc
gaggccgtgttcttaggtcagtacgggatccctcggccctggtacttccccctcagtaag
tcctactggttcagagagaaagagggaaagtccaacagctttcctctgagccggagagga
aacccagaagctgtgaacatcgaggaggagctggctcacctgcagcccagcgtctacatc
gaggaggagctggctcacctgcagcccagcgtctacatcgagaacctggtgaaggtttat
cgccacgggaagaagctggcggtggacggactgaccctcggcttctacgagggacagatc
acatgcttcctgggacacaacggagccgggaaaaccaccaccatgtccatcctgacgggt
ctgttccctccgacctctggtaccgcctacatcctgggcagagacatccggacggagctg
agcgccatcagacagagtctgggagtctgtcctcaacacaacgtcctcttcagcatgctg
acggtggaggaacacatctggttctacggccggctcaaaggtttgtcggagcagcaggtg
aaagacgagatcgagcagatcctgcaggacacggagctgctgcacaaacgcagcgcccgg
gccaacgagctgtctggaggcatgcagaggaaactctcggtggcgctggccttcgtctgg
gggtcaaaggtcgtgatcctggacgaacccacggccggagtcggcccgtacactcgcaga
gtaatctgggacctgctgcgcaagtaccggcccgggcggaccattatcctgtcaacacac
cacatggaggaggcggacattttgggtgaccgcatcgccatcatctcccacgggaagctg
tgctgcgtgggctcgtctctgttcctgaagaaccagctggggacggactatttcctgaag
ctggagaagaaggaactggaaccatcgctcagctcctgcaggaactgctgcaccgtgtcc
ttcaacaagaaggaggagagcagcgaacatgaaagtgaagctgctgccatcgagaccaga
gagacggaccggctcagctgttcagacaggaaaggcccgtatcaggtgaaaggctggagt
ctgaagcagcagtttgtggatctgatgtggaaacgatttctcaacgctcgccgctccctc
aagggcttcttcgctcagattgttctcccggtggtgtttgtgttcatcgcgctggtcttc
agtctcatcgtccctccgtttgggaagtatccgagtctggagctgcagccctggatgtac
gaggaccaggtcaccttcatcagtgatgattcacccggagactccaacatgcagaagtta
cttggcgctctgttggacgcgccaggcttcgggactcgctgcatggacggacatcccatc
ccagaggctccgtgtacgatgggcgatgacgactggagaactccagaggtccctggaagc
atcacgcagctgttcagctcgtccaactggacgatggacgacccgtctccggcgtgcatc
tgcagctacgacggccagaagaagatgctgccggactgtcctgctggagctggggggctg
ccaccgccagagatgaagctgagcaccaccgactctcttcagaacctgacggggagaaac
atctccgactacctggtgaaaacatacgccgacatcatcggcaagagtttgaagaacaaa
gtttgggtgaatgaattcaggtacggagggttctcattgggcgccaggagcactcaggtc
ctccctccggccaatgaggtcgatgacgccatcgagcgaatcagaaagatctttgagtta
cagaagggcgcggctgctgatcgattcctcgacagtttgtccggttttattaacggtttg
gacacgacgaacaacgtcaagatctggttcaacaacaaaggctggcacagcatcggcgcc
ttcatcaacgtgatgaacaacgccatcctgcacgccaacctgccgccgggccgaaacgcc
agtcgctacggcatcagagccttcaaccatcctctgaacctcaccaaggagcagctgtca
caggtcgctctggtaacgacctccgtggatgtcctgttgtccatctttgtgatcttcgcc
atgtccttcgtccccgccagcttcgtggtcttcctcatccaggagcgagtcagcaaaccc
aaagacatgcagttcatcagtggcgtgcagccgctgctctactgggtggccaacttcttc
tgggacatgtgtaactacatcgtcccggcaacgctggtcatcatcatcttcatcagtttc
caacagaaagcctacgtctcctccaccaacctgccggtgctcgtgctgctgctgctgcta
tacggctggtcgatcactcctctgatgtacctggcgtcgttcttctttaagatcccgagc
acggcgtacgtcgtcctcaccagcatcaacatcctgatcaccatcaactgcagcatctcc
accttcatcatggagctgttcgggaacaacgagatcggaggaatcaacatcatccagaag
aacgtcctgctcatcttccctcacttctgtctcggccgaggactcatcgacatggtgaag
aaccaggccatggccgacgccctccagagatttggtgagaacaggttccgctctcctctg
gagtgggacatggtggggaagaacctgttcgccatggctgtggagggagtcgtgttcttc
atcatcaccatcctcatccagtacagattctacatcaaacccaggccgatctgtacactc
accaaactgggagcgctgggagaagaggtgtttaagaggaaacagaagccagcgatggac
cgactgtgtgttgggattccacctggagagatgttcacagagatctacatcacaaaggga
gggactgcaggggtcaatgatgaacatgaggtcagacagattgaaacagcatcctggaaa
ccagacggaccagaaacaacaatcaaacaggaagacatctttcaaaccccacctggaaga
aatgaaccaatcagaacagtgatgacaatgggagtggctggcatcgggaaaacagtctta
acacagaagttcactctggactgggctgaaggcaaagccaaccaggacatccagttcaca
tttccattcaccttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaa
cttgttcattacttctttagtgaaaccaaagaagcaggaatctgcaggtttgaagagttc
cctgttgtgttcatctttgacggtctggatgaatgtcgacttcctctggacttcctcaac
actgagaccctgactgatgttacaaagtccacctcagtggatgtgctgctgacaaacctc
atcaggggcaaactgcttccctctgctcgcctctggataaccacacgacctgcagcagcc
aatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttcactgaccaa
cagaaggaggagtacttcaggaatagattcagagacaagaagaaggccagcagaatcatc
tcccacatcaagacattacgaagcctccatatcatgtgccacatcccagtcttctgctgg
atcactgctacagttctggaggacatgttgaagaccagagagggaggagaactgcccaag
accctgactaagatgtacatccacttcctggtggttcagtccaaagtgaagaacatcaag
tatgatagaggaggtgagacagatccacattggagtccagagagcaggaagatgatcaag
tctctgggaaaactggcttttaagcagctgcagaaaggcaacctgatcttctatgaatca
gacctgacagagtgtggcttcgatatcaaagcagcctcagtgcactcaggagtgttcaca
cagatccttaaagaggagagtggactgtcccaggacacagtgttcagcttcgtccatttg
agtgttcaggagtttctggctgctcttcatgtccatctgaaattcatcaagtctggagtc
aacctgctgtcagaagaacaaacaacaacaacaacaacaacatcaacaacatgtttttac
cagagtgctgtggacaaggccttacagagtccaaatggtcacctggacttgttccttcgc
ttcctcctgggtctttctcttcagaccaatcagactctgctaggcctgctgacaaagaca
ggaaatagttcacaaaccaatcaggaaacagtcaagtatatcaagaagaagatcagtgag
gatctgtctgcagagagaagcatcaatctggtccactgtctgaatgaactgaatgatcgt
tctctagtgaaggagatccatcagtccctgagatcaggaagtctctccacagataaactg
tctcctgctcagttgtcagctctggtcttattgtcatcagacgaagatctggatgtgttt
gacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtggtcaaa
gcctccaacaaagctctgtaa
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integrated database retrieval system
