Sander lucioperca (pikeperch): 116051213
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Entry
116051213 CDS
T07345
Name
(RefSeq) LOW QUALITY PROTEIN: DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116051213
Membrane trafficking [BR:
sluc04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
116051213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
Motif
Other DBs
NCBI-GeneID:
116051213
NCBI-ProteinID:
XP_031157320
Ensembl:
ENSSLUG00000004005
LinkDB
All DBs
Position
10:18510984..18569249
Genome browser
AA seq
1375 aa
AA seq
DB search
MCFAGGEAETLQRGXKERCXGTGGGQTDGMTEEKCPQLVDYFVLAGLDPAGAWKPLDECG
IKTSNSSSSSSSSSSSSSSSSSSSSSVSSGRAVEWVTDLAVIARGLGEEVPEGFTCIEKT
LGGHSAELSTGIINNPHLYLCYRRGGDKPPILDLGVLYEGKEQLKPSWVVIETTPYRRSA
NLSSSFAPMAHRVFLTYRQALDSQGLHTLGVTDIALLLPRKGEVAPHTFCRVDKNLNTGM
WGPAMYVCYKRAVAKANALVYEASLISRYPEEDLEAFPLPESVPVFCLPMGVTVESWPLN
TKYQLPVFSTFVLTSASGDKVYGAAIQFYESFSRDLLSERQSVRLGLLSVVDRRPITNRS
LQVKKSICVLSHWPFFTVFQKFLTFIYRYSISGPHVLPLEKHISSFMHNVPFPSPQRPRI
LIQLSLHDKLLLCQPVSSPLPLSGASFLKLLQNLGPENACTLLLAVLAESKLLLHSLRPD
VLTSVSEALVSMIFPLRWSCPYIPLCPPQMADVLLAPMPFIVGVHSSCLNLNDLPTDVVC
VDLDTNTIFQSDNKKPLSWQSLPRKPSKTLFNTLTNLHKTLEKICTPVQEEAMLEFLWTD
CDQIYRSQKQLELEIQEAFLRFMSYLLRGYRTFLLPITQAPSNTATDCSSRFNLQGFLKS
RDRTQQKIYSQLIRMQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEKPEEVRLIDLDE
SHSGEHTVFIMPPEEPQEADGSECPSVYSYETFPTLRPELFDRTQDQLRVPGKGSAPSSL
TLRRTKQEIKLAQQRAQKYSGVSDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRALHTAY
DVLKHMENHKVVLPDEVCYRVLMQLCGQYGQPVLAVRVLLEMKKAGIIPNTITYGYYNKA
VLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKHRQKSGSVGSRGVDNNSKGGIGQRV
SEQRQSRKAQVADTLLKAKERLVNATSESSLLVGSDLDLTDMPSPAYPLRRSWDTNQEGA
GLEGAGLEVLMSSCSLCHSCNSLVYDEEIMAGWTSDDSNLNSSCPFCCTSFVPHLNAEIC
DLGPVCSVERTNWNVEDNVESAMRPPSGQEGSLRHQCNGLSEDSSSETSSYSENSRTNTG
SSVGATPLQETVAYLSPLVLRKELESLLENEGDAVLAKPQFLDKHSIIFWNLVWYFQRLG
LPSNLLQLVRASPMVSQITQSDNSAVRVRLLWDTLTPDTDQWPPLYILWRIHKGVPMRSY
SWRRHNHPFTLSFLAEVLRCVGMNEVHKAITLFLDTLAKQPGSASTQRSVYREFLFLTLA
AMDKDSVAAFDKKYKAAYVRLSGNLSSEALRKKRAQPPSAKAVDCRCSFHPPLEC
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttgctggtggggaggctgaaacgttacaaagggganctaaagaacgctgctga
ggaacaggtggagggcagacagacggcatgaccgaggagaaatgtccccagctggtggac
tactttgtattggcaggactcgaccctgcgggggcctggaagcccctagacgagtgtggc
ataaaaaccagcaactcctcctcgtcctcgtcctcgtcctcgtcctcttcctcgtcctcg
tcctcgtcctcttcctcggtctcgtcgggacgagcggtggagtgggtgacggacctggca
gtgatcgcccgggggctcggggaggaagtgcccgagggcttcacctgcattgagaagacg
ctgggcggacactcagctgagctgagcaccggcatcatcaacaaccctcacctgtacctg
tgctatcgccggggaggggacaaaccacccatactggacttgggggttctgtatgagggg
aaggagcagctgaagccgagctgggttgtcatcgagacgacgccctacagacgctcggcc
aacttgagctccagcttcgccccgatggcccaccgcgtgttcctgacgtaccggcaggct
ctggactcgcagggcctccacacgctgggcgtcaccgacatcgccctgctgctgcccaga
aaaggggaggtcgccccgcacaccttctgccgcgtcgacaagaacctcaacaccggcatg
tggggtcccgctatgtatgtgtgctataagagagcggtggccaaagccaacgccctggtc
tacgaagccagtctgatcagccggtacccggaagaggacctggaggcgtttcctctgccg
gagagcgtgccggtcttctgtctgccgatgggcgtcaccgtggagagctggcctctcaac
accaagtaccagctgcccgtcttctccaccttcgtcctcacctccgcctccggggacaag
gtttacggagcagccatccagttctacgagtccttctccagggatctgctgtcggagcgg
cagagtgtgcggcttgggctgctcagcgtggtggaccggcggcccatcaccaaccgcagc
ctgcaggtgaagaagagcatctgtgtcctctcccactggcccttcttcaccgtcttccag
aagttcctcaccttcatctacagatactccatctccggaccccacgtcctgccgctcgaa
aaacacatctccagcttcatgcacaacgtcccgtttccttccccccagcggcctcgcatc
ctcattcagctctctctgcatgacaaactgctgctctgccagccggtctcctctcctctc
ccgctcagcggtgcaagcttcttgaagctgctgcagaacctcggtccagaaaacgcctgc
acgttgctgctcgccgtcctcgccgaaagcaaactgctgctgcactcgctccgccccgac
gtcctcacctccgtcagcgaggcccttgtctcgatgattttccctctgcgctggagctgt
ccctacatccctctgtgtccgccgcagatggccgacgttctgctggcgccgatgcccttc
atcgtgggcgtccactccagttgcctcaacctgaacgacctccccactgatgtggtgtgc
gtcgacctggacaccaacaccatcttccagtcggacaacaagaagccgttgtcatggcaa
tcattacccaggaaacccagcaagactctgttcaacaccctcaccaacctccacaagact
ctggagaagatttgcacccccgtccaggaggaggcgatgctggagttcctgtggacggac
tgcgatcagatctaccggagccagaagcagctggagctggagatccaggaggccttcctt
cgcttcatgagctacctgctgcgcggataccgaaccttccttctgcccatcacccaggcg
ccgtcgaacaccgccaccgactgcagctcccggttcaacctgcaggggttcctgaagtct
cgggatcgaacgcagcagaagatttacagtcagctgatcaggatgcagatgttcactcag
ttcatcgaggagtgctcctttgtcagcgaccggcacgcctgcctcgagttctttgacgag
tgcgtccaaaaggtggacgtggagaagccggaggaggtgaggctgatcgatctggatgag
agtcacagcggcgaacacaccgtcttcatcatgcctcctgaagaaccgcaggaagctgac
ggctccgagtgtccctcagtctacagttatgaaaccttccccaccctgaggccggagctc
tttgaccggacgcaggaccagctccgggtcccagggaagggcagcgcccccagcagcctc
accctccgccgcaccaaacaggagatcaagttggcccagcagcgagctcagaagtactca
ggggtgtcggacatgtggtccaagtgcctgctgggtcactgctacggcctctggttcatc
tacctgcccaccttcgtccgggcggagagcgccaaggtgcgcgcgctgcacacggcctac
gacgtcctcaaacacatggagaaccacaaggtggtgctgccggacgaggtgtgttacagg
gtcctgatgcagctgtgtggtcagtacggtcagccggtcctcgccgttcgagtcctgctg
gagatgaagaaggctggaatcatacccaacaccatcacctacggatactacaacaaggcg
gtgctggagagcaagtggccgtccaccaatcagggaggacgtctccgctgggccaagctg
aggaacgtcctattggctgtggcccagttcagacagccaatcaaacaccgtcagaagagc
ggatcagtgggctcacgtggagttgataacaacagcaaaggagggatagggcaaagggtg
tctgaacagaggcagtctcggaaagctcaagtggctgatacactgctgaaagccaaggag
aggctggtcaacgctacctcagagagttcgttgttagtaggaagtgacctcgacttgacg
gacatgcccagtccggcctatcctctgcgccggtcctgggacaccaaccaagagggggcg
gggcttgagggggcggggctcgaggtcctgatgtccagctgctctctgtgtcacagctgt
aactcattggtttatgacgaggagatcatggccggctggacgtcggacgactccaacctg
aactcgtcgtgcccgttctgctgcacgtccttcgtcccccacctgaacgctgagatctgt
gatctgggaccggtctgcagtgtggagcgcaccaactggaacgtggaggacaatgtggag
agcgccatgcggccccccagtggtcaggagggctcgctgcgacaccagtgtaacggtctg
agtgaagactcgagctccgagaccagcagctactcggagaacagcagaaccaacacgggt
tcgtcagtgggcgccacccccctgcaggagacagtggcctacctgagtcctctggtcctg
aggaaggagctggagagtctgctggagaacgagggcgacgcggtcctggccaagccccag
ttcctggacaagcactccatcatcttctggaacctggtctggtacttccagcgcctgggc
ctgcccagcaacctgctgcagctggtccgagcctcaccgatggtcagccagatcacacag
tcggacaactcggccgtgagggtgcggctcctctgggacaccctgacccccgacacagac
cagtggccgccgctctacatcctctggaggatccacaagggcgtcccgatgagaagctac
agctggcggagacacaaccacccgttcaccctgtcctttctggcggaggtgctgcgctgc
gtcggcatgaacgaggtgcacaaagccatcacgctcttcctggacacgctggccaaacag
ccgggctccgcctcgacgcagaggagcgtgtaccgagagttcctcttcctcactctggca
gctatggacaaagacagtgtcgctgcgttcgataagaagtacaaggcggcgtacgtccgg
ctcagcggcaatctgagtagcgaggcgctccgtaagaagcgagctcagcctcccagcgcc
aaggccgtcgactgcagatgcagcttccacccgccgctcgaatgctga
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