KEGG   Sander lucioperca (pikeperch): 116051233
Entry
116051233         CDS       T07345                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sluc03009]
    116051233 (rrp9)
Ribosome biogenesis [BR:sluc03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    116051233 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_EML WDR55 EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_NWD2_C VGLL4
Other DBs
NCBI-GeneID: 116051233
NCBI-ProteinID: XP_031157340
Ensembl: ENSSLUG00000014141
LinkDB
Position
6:4921446..4928717
AA seq 486 aa
MSSPFFMKKKENPKFAKKGKNTAVLKRKADGDSGGKSKLRAKKPNSKHNEEISSDSETES
PVVPRKRHSKEEIDYEETPQEKKLRLAKLYLEQLKEEEEDKAEEDSFETDLIAGRLQEDV
LEQKGKLQRLIAKDLIPPDASEIRVLRGHKLPITCLVISSDDKFIFSAAKDCSIIKWDVE
TGKKLHIIPGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDVNKLIMIWEAETCKHLYK
FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSREC
CVTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK
PLCTVKQAHGRHGDAGLEQPHWVASVAALQNSDTVASGASGCSHNSQVQLWKCGQNYRGL
QPLFSVPVSGFINSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYVIPLKRKPPNPE
EAKMTE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtcttcgcctttctttatgaagaaaaaagaaaaccccaaatttgccaaaaaggggaaa
aatacagcagtgctgaaacgaaaggctgatggggactcaggtggaaagagcaaactacga
gccaagaaacccaactccaaacacaacgaagagatttccagcgactctgagacagagagt
cctgtagtgcccagaaaaagacattccaaggaagagattgattatgaggaaacaccacag
gagaagaagcttagattagccaaactttacctcgaacagctaaaggaagaagaggaagat
aaagccgaagaagactcatttgagactgatctgattgctggaagacttcaagaagatgtg
cttgaacaaaaaggaaagcttcagcggcttattgccaaagatctcattccgccggatgct
tcagaaatcagggtgttaagaggacacaaacttccaattacctgtctggtcatcagctct
gatgacaagttcatcttttctgctgccaaagactgctccatcattaagtgggatgttgag
actgggaagaaactgcacataatacctggcggaaggaaaggtacagaggatcggcatgtt
ggacatacagcgcatatcctgtgtatggccatatcatcagatggaaaatacttggccact
ggagacgtgaacaaactgatcatgatctgggaggcagaaacatgtaaacatctatataaa
ttcacaggacacaaagggcctgtttcgggtctttcattcaggaagggaactcatgatctg
tacagtgcctctcatgatcgctcaataaaggtgtggaatgtggacgagaatgcgtatgtg
gaaactctctttgggcatcaggacgccatcacaggactggacagtctgagccgtgagtgc
tgtgtgactgcaggaggaagggaccgctcagtgcgggtgtggaagatagccgaggaatct
cagctggtgttccacggccacgagggttcaattgattgtatccagctcataaacgaggag
cacatgataacaggagctgatgatggctctgtgtctctgtggagtgtcaacaagaagaag
cctctctgcacagttaagcaggctcacggtcgccatggtgatgcagggctggagcagcct
cattgggtcgcctcggtagcagcgcttcaaaactctgatacagtcgcctcaggtgcctct
ggctgttcacacaactcacaggtgcagctgtggaagtgtggccagaattaccgtgggctg
cagcctctattcagtgtgcccgtgtccggtttcatcaacagtctgaagttttcgagctcc
ggtcagttcttggtggcaggagttggacaggagcacaggttgggtcgatggtggagacta
aaagaggccaagaatgggatctatgttattcctcttaaaaggaaacctccaaatccagag
gaagccaagatgactgaatag

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