KEGG   Sander lucioperca (pikeperch): 116051288
Entry
116051288         CDS       T07345                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116051288 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116051288 (wdr82)
   03036 Chromosome and associated proteins [BR:sluc03036]
    116051288 (wdr82)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     116051288 (wdr82)
Chromosome and associated proteins [BR:sluc03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     116051288 (wdr82)
    COMPASS/SET1 complex (yeast)
     116051288 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_WDR35_TULP_N VPS8_N Beta-prop_DCAF4 MinC_C
Other DBs
NCBI-GeneID: 116051288
NCBI-ProteinID: XP_031157441
Ensembl: ENSSLUG00000020102
LinkDB
Position
6:complement(5771602..5776714)
AA seq 318 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRVLDAFKGAVLHSFGGYNNNKC
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMVSGGLKALLKQISK
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagctttagagttgctaaggtgtttcgagaaaac
tcagacaaaattaattgtttcgatttcagttcgaatggagaaacaattatttccagcagc
gacgacgattccttagtcttgtacgactgccaagagggaaaacctaagaggactctctac
agcaaaaagtatggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaatcgatgatactatccggtacctgtcccttcatgacaacaaatacatc
cgctactttcctgggcataacaaaagagtgacgtctctctccatgtctcctgtggacgac
acatttatatctggctcattagataaaacaatcagattgtgggatttgcggtcacctaac
tgtcagggtttgatgcacctgcaggggaagccggtgtgctcttttgatccagagggtcta
atatttgctgcaggaattaattcagagatggttaaactttatgatctgcggtcgtttgac
aagggtccttttgcaaccttcaagcttcagtatgaccggacgtgtgagtggacaggactc
aagtttagcaatgatggaaaactcattcttctttctactaatggtggagcccttcgtgtc
ttagatgcttttaagggtgccgtgttacattcctttgggggctacaacaacaataaatgt
gtaacactggaggcatcattcaccccggattctcagtttgttatgatcggctctgaagat
ggaaaaatccacgtgtggaatgcagagagcggtatgaaggtggctttattagatgggaag
cacacgggaccaattacctgtctgcagttcaaccccaagttcatgacgtttgcgagtgcc
tgctccaacatggtgagtggggggctaaaagcattactgaagcagatttctaaatga

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