Sander lucioperca (pikeperch): 116051378
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Entry
116051378 CDS
T07345
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00260
Glycine, serine and threonine metabolism
sluc00630
Glyoxylate and dicarboxylate metabolism
sluc00670
One carbon pool by folate
sluc01100
Metabolic pathways
sluc01200
Carbon metabolism
sluc01230
Biosynthesis of amino acids
sluc01240
Biosynthesis of cofactors
sluc04981
Folate transport and metabolism
Module
sluc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
116051378 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116051378 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116051378 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
116051378 (shmt2)
Enzymes [BR:
sluc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
116051378 (shmt2)
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Paralog
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GFIT
Motif
Pfam:
SHMT
DHX37_C
Motif
Other DBs
NCBI-GeneID:
116051378
NCBI-ProteinID:
XP_031157614
Ensembl:
ENSSLUG00000021526
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All DBs
Position
6:8484021..8512841
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AA seq
501 aa
AA seq
DB search
MLSFALRQLTRPLCQRASVRLSVRGQQSHAANHTVDEDRPWTGQESLAQDDPEMWDLLLK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAVYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNTATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYMLADMAHISGLVAAKAIPSPFEHADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYELEDKVNFSVFPSLQGGPHNHAIAGVAVALRQAHSPMFKEYIDQVLRNAKSMAT
ALLNKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTGKLQDFKNFLLQDPETMARMA
NLRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgccctgagacaactcacacggccactgtgccagcgagcctcagttcgt
ctcagtgtacgtggccagcagtcccacgctgccaaccatacagtggatgaagatcgtccg
tggacgggccaggaaagcctggctcaggacgaccctgagatgtgggatctgctgctgaag
gagaaggacaggcagtgccgcggcttggagctcattgcatcggagaatttctgcagtcga
gcagctctggaagctcagggctcctgtctgaacaacaaatactctgaaggctacccaggg
agaagatactatggtggagcagaagtggtcgaccaaattgagctgctgtgtcagaaacga
gccttggaggcctttgacctggacccagctctgtggggtgtcaacgtccagccatactct
ggctcacccgctaactttgctgtctacaccgccgtgctcaacccccatgaccgcattatg
ggcctggacctgcccgacggaggacatctgacccatggctacatgtccgatgtgaagagg
atctcagcaacctcaatctattttgagtccatgccttacaagctaaatactgcaacagga
ctcatagactatgaccagatggagatgacggccaagctgttccggcccaagctcatcatc
gctggcaccagtgcctatgcccgcctcattgactacgcccgaatcaagaagctgtgtacc
gacattaaggcctacatgctagcggacatggcccatatcagtggcctggtggctgccaaa
gccatcccctctccctttgaacatgctgacctggtcacgtctaccacacacaaatccctc
cgaggagccagggctggcctcatcttctatcgtaagggtgttcgctcagtggacaagaag
gggaaggagatcatgtatgaactggaggacaaggtgaacttctctgtgttcccctccctg
cagggcggacctcataaccatgccatcgctggtgtggctgtggcactcagacaggctcac
tctcccatgttcaaggagtatatcgaccaggtactaagaaatgccaagtctatggctaca
gctcttctcaacaaaggctacaccctggtatcaggcgggactgacaaccacctggtcctg
gttgacttgcggcctaagggcattgacggggctcgggccgagagggtgctggagctcgtg
tcaatcactgccaataagaacacctgccctggggacaagagcgccctgactcctggtggc
ctcaggctaggtgctccagccttgacatccagacagttcaaagaagctgactttgtgcaa
gttgtcgagttcatggatgagggcttcaagattgccttggacgtcaagaaaaagacagga
aaactccaggacttcaaaaacttccttcttcaggacccagagaccatggctcgcatggcc
aacctgcgccaccgcgttgaagcttttgccaggccctttcccatgccaggcttccacgac
cattaa
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