Sander lucioperca (pikeperch): 116051970
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Entry
116051970 CDS
T07345
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116051970 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116051970 (gtf2f1)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
116051970 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
116051970
NCBI-ProteinID:
XP_031158313
Ensembl:
ENSSLUG00000013973
LinkDB
All DBs
Position
21:12625287..12632695
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AA seq
533 aa
AA seq
DB search
MTSLGGSSSSTTEYTVRVPKNTSKKYNIMAFNSGDRVNCSTWTQARMERDMSARRIYGEE
ESAEGAAGSEFGKKQREEARRKKYGIVTREFKVEDQPWILKVNGKAGKRFKGLKKGGVTE
NASYYIFTQCPDGAFEAFPVHGWYNFTPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RFREQERGGDDDDDENEKSGKKKKKGGGRGGDLRIHDLEEDLEMSSDDSDSSMGDDGEGK
TKAKKATGKGKAKKKKRKSSDKEALEDSDDGDYEGLEVDYMSDESSSSDEELEKGKPGKA
EHHPKGIDEASESEEESEEEKQNEEEAKEEEEEEEGKKTPVQTEKKKKKDSSGESESSDD
SDIEGETASALFMKKRTPPKRGGRGSAGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQG
KRPTPGPSTDSPAAKRLKMEPSSQSPVPSGKSTPQPPSGKSTPSSSDVQLTEEAVRRYLI
RKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctggggggcagcagttcctcaaccacagaatacacagtgcgagtccccaaa
aacaccagtaagaagtacaacatcatggctttcaattcaggagacagagtcaactgttca
acttggacacaggctcgtatggaaagagacatgagtgctcggcggatatatggggaggaa
gagtcggcggaaggcgcggctggcagtgagtttggcaaaaagcagcgtgaggaagcacgg
cggaagaagtatggtattgtgacacgtgagttcaaagtggaggaccagccctggattctc
aaggtcaatggcaaggccggcaagaggttcaaaggtctgaagaagggcggtgttacagaa
aatgcatcctactacatctttacgcagtgtcccgatggagcctttgaggctttccctgtc
cacggctggtacaactttacaccgcaggccaagcaccgaactctcactgctgaggaggct
gaggaagagtggggcagaagaaacaaggtggtgaatcacttcagcatcatgcttcagaga
cgtttccgggagcaggagcgtggtggtgatgatgatgatgacgagaacgagaagtcgggg
aagaagaaaaagaaggggggtgggagagggggcgacctgcgcattcacgacctggaagag
gacctggagatgagcagcgatgacagtgacagcagtatgggggacgatggagagggcaag
acaaaggcgaaaaaagccacagggaaaggaaaagccaagaagaagaagagaaagagcagt
gacaaagaggccttggaggacagcgatgacggtgactacgagggtctagaggtggattac
atgtccgatgaaagcagcagttcagatgaagagctcgaaaagggaaagcccggcaaagca
gagcaccaccccaaagggatcgatgaggcgtctgaaagtgaggaagagagtgaggaggag
aaacagaatgaagaggaagcaaaagaggaggaggaagaagaggaaggaaagaaaaccccg
gtccaaacggaaaagaagaagaaaaaagacagcagcggcgagtcggaaagctccgacgac
agtgatatcgagggagagacggcctccgctctgttcatgaagaagcgcacgcctcctaaa
cgtggaggacgcggctctgcaggcagctccaggactggcagtcgccccgggacaccatcc
atagactctgcctccacctccaatacactccgtgctgctgccagcaagctagagcaaggt
aagagaccgactccgggtcctagcactgactctcccgctgccaaaagactgaagatggag
cccagcagtcagagccctgttccctctgggaagagtacgcctcaacccccatccggcaaa
tccacccctagctcaagtgatgtgcagctaacggaggaagcggtccggcgttacctgatc
cgtaaaccaatgaccaccaaagacctgctgaagaagttccagaccaagcgcacaggtttg
agcagtgagcagactgtcaacgtgctggcacagatcctgaagcgtctcaatccggagcgc
aagaacgtaaacgataaaatgcacttctacctcactgagtaa
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