Sander lucioperca (pikeperch): 116052113
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Entry
116052113 CDS
T07345
Symbol
fga
Name
(RefSeq) fibrinogen alpha chain isoform X1
KO
K03903
fibrinogen alpha chain
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116052113 (fga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116052113 (fga)
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116052113 (fga)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116052113 (fga)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116052113 (fga)
Hyaluronan
Extracellular matrix or blood plasma proteins
116052113 (fga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
116052113
NCBI-ProteinID:
XP_031158489
Ensembl:
ENSSLUG00000006182
LinkDB
All DBs
Position
17:12005695..12018269
Genome browser
AA seq
709 aa
AA seq
DB search
MERLNVLICLGLICVASTLQAELVDPRGARPVEQGTRSETCATQREWPFCSDDEWGSKCP
SGCRILGMINKYDHSALKKIEKIRSLLDLNKAKHRSADQVSKQTYDYLKDKLTLDSDNDN
SYFNLAQSLRQRISEMKIKIDRQLRILAALKDRVKDQVVEMQRLEVDIDIKLRSCKGSCQ
SYTEYQVDRESYVALEKQVSQLDSQSAQNIESVGTLYVMKSRPLQGVIVDSIYKSKDVSS
NTAGQQKEDMFPEVRAVQLVLEQEGSSSSSPATISKVPGTSLSPSTSSSSSSSSSSASSG
TSTKSITELGGRGDAGSGFFGMEVSQPSTGHVTTKTVSCTRSTRRTVVHTKTGPVEKVEE
VIEGGPECSDMTDSTRGGLGALFPSLSHTSSSSSSSSSSSVTKTVQTGGTKGSLLDTKTE
FGNPFGADTGLDMFVEDTGFDMGLFDTGATEDDLPDIHARSVKSVVTERQADYIGKDCVE
AHQNHLKGETNGLFKIKPGGADSAQVVEVYCQQQGLMGGWLLVQQRESGALGFNRTWAEY
RDGFGSVDANGNGEFWLGNQNLHLLTNQGESMLKVELEDWDGGVASAEYTVSVGAETEGY
PLHVSGYTGDAGDALAMPVSDTPSHNGMKFSTFDKDNDVWEESCAERYGGGWWYNKCQTA
NLNGVYYKGAYDPEKNKPYETENGVVWVTYKPANYSLKTVRMFIRPAAF
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggagcgacttaacgtactcatctgtctcggcttgatttgtgtggcttcaactctgcag
gccgagttggtcgaccccagaggagcccgaccggtggagcaaggcacccgatccgaaact
tgcgccacgcagagggagtggcctttctgctcagacgatgaatggggctctaaatgcccg
tcgggctgcaggatcctgggaatgataaataaatacgaccacagcgcgctgaagaagatc
gagaagatccgcagcctcctggatctgaacaaagccaagcaccgctccgccgatcaggtg
tccaaacagacctacgactacctaaaggacaaactcaccctcgactctgataatgataac
agctacttcaacctggcccagtcgctgcgtcagagaatctcggagatgaagatcaagatc
gaccgacagctgaggatcctggctgccctgaaggatcgagtcaaagaccaggtggtggag
atgcagaggctggaggtggatatcgacattaagctccgttcctgcaaaggatcctgccaa
agctacaccgagtaccaggtggaccgggagagctacgtggcgctggagaaacaggtcagc
cagctggactcccagtcggctcagaacatcgagtcggtggggacgctgtacgtgatgaag
agcaggcctctgcagggcgtcatcgtggacagcatctacaagtccaaggatgtcagcagc
aacacggcaggacagcagaaagaagacatgttccccgaggtgagggcggtccagttggtc
cttgaacaggaaggctccagctcctcatccccggcaaccatctccaaggtcccaggtact
tccctctctccgtctacatcctcatcatcatcttcttcctcctcctccgcctcctccggc
acgtccactaaatccatcactgaactcggaggacgcggcgacgccggcagtggtttcttt
ggcatggaggtcagccagcccagcacgggccacgtcaccaccaaaaccgtctcatgcacc
cgcagcacccgcaggaccgtcgtccacaccaaaaccggcccggtggagaaggtggaggag
gtgattgagggaggccccgagtgctcggacatgacggactccaccaggggagggttgggc
gccctcttccccagcctcagccacacatcctcctcttcctcgtcctcatcttcctcttct
gtgaccaagaccgtccagaccggcggtaccaagggaagcctcttggataccaaaaccgag
ttcgggaatccattcggtgcggacaccgggctcgacatgtttgttgaagatacagggttc
gacatgggcttgtttgacacgggcgcaacagaggatgaccttcctgatatccacgcccgg
agtgtgaagagcgttgttactgagcgccaagccgattatataggaaaagattgtgtcgaa
gcccaccagaaccatcttaaaggggaaacgaacggactgtttaagatcaaacccggcggc
gctgactcggcacaggtagtggaggtttattgccagcagcaggggctaatgggcgggtgg
ttgttagtgcagcagagagagagcggcgcgctcggcttcaaccgcacctgggccgaatac
cgcgacgggttcggatcggtcgacgcgaacggcaacggggagttctggctaggcaaccag
aacctccacctgctgaccaatcagggggagagcatgctgaaggtggagctggaggattgg
gatgggggtgtagccagcgccgagtacacagtcagtgtcggcgcggagacggaggggtac
ccgctgcacgtgtccgggtacaccggggacgccggggacgctctggcgatgcccgtttct
gacacaccgtctcacaacgggatgaaattcagcacctttgacaaagacaacgacgtttgg
gaggagagttgcgcggagaggtacggcggcggctggtggtacaacaaatgccagacggct
aacttgaacggggtttattataaaggcgcgtacgacccggagaaaaacaagccgtacgag
actgaaaacggagtcgtgtgggtgacgtataaaccggccaattacagcctgaaaactgtt
aggatgttcatccgaccggctgctttttaa
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