Sander lucioperca (pikeperch): 116052159
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Entry
116052159 CDS
T07345
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116052159 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116052159 (vps54)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116052159 (vps54)
Membrane trafficking [BR:
sluc04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
116052159 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
zf-Tim10_DDP
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
116052159
NCBI-ProteinID:
XP_031158537
Ensembl:
ENSSLUG00000006325
LinkDB
All DBs
Position
4:29392445..29440758
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AA seq
937 aa
AA seq
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MASGHGSSPLPRGGRDGIYHKERDPPPPRCRTICSLPDVCPKEPTGEGRGLCDGPSVVAE
HDRWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFYLPNITREHFGPY
LQEMAQRERIHERCKTICPNKDDVDAVSSITTNHDKSRAELEQVPKIFMKPDFALEDPAT
FNAVLPWSHFNSAGGKSSRDVASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQ
HELQDRLEETQRAVAVLRGRTAAIDRVMCQGPLRAVRTALTRNNCVKLHNKLKLMAAVHQ
TQPTVQLLLSTSEFVGALELISTTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMVEDF
SMYARSDLNRSLKDEPLVLEKVHNPNAASQKERLESLVFGLLRQRKLDFLDIYSEEMILA
AKAIVSQCVAENVLLIEDIDTEVVTKLADQMRLMTFPQWFELLKTVFESFLLFLQKIKAT
LSVIKNVVLEVLASNQRNRLLEEAGSAPPVQEAPDGLSLLQGEAELAYLTHEGLFISDAL
NEASRIQQSRAEADGSESASGATESFVSREQSFMSGDNMMPSDLELNRVINNIQELLHTA
SDVSHDRCVKVLTARAKDGSLERLSSAEFVCLSRAVEGFVRDTEELCGRRSVSLRGALQS
QANRFVHRFHEERKTKLSLLLDNERWKQAEVPSEFQDLVNSIADGRITLPERKIPGPEDR
KPTEFLLVNGQKYAVIGTVLLLIRIFLEYCQCVNDIPSIATDMLTRLSDLLKHFNSRSCQ
LVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPIIRAHFETKLQPKQFSVLRHFDHI
TKDYNDHIAEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVCKQMAKMHEAISELLP
EEQTQMLFLRINASFKLHLKRQLARLGVVNDGGPQNG
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggccacggctcttccccgctgcctcgcggaggccgagacgggatctatcac
aaggagcgggacccccccccgccccgctgccggaccatctgctccctgcccgacgtctgc
cccaaggagcccaccggtgaggggcggggcctgtgtgacggcccgtccgtggtggcggag
cacgacaggtggaccgtgtacagctcgaaggtcaacctcccggccgcgctgaacgacccg
cggctcgccaagcgggagtccgactttttcaccaaaacatgggggctggactttgcggag
acagaggtgatgccctccttctacctccccaacatcaccagggaacactttgggccgtac
ctgcaggagatggctcagagggaaagaatccatgaacgctgcaagacgatctgtcccaac
aaagacgacgtggacgccgtctccagtatcaccaccaatcatgacaaatcccgagctgag
ttggaacaagtcccgaagatcttcatgaagcctgactttgctctggaggacccggccacc
ttcaacgccgtgttgccctggtcgcacttcaacagcgccggggggaagagcagcagagac
gtggcctcgtccaaactgctgcaggagaagctgagtcactacctggacgtggtggaagtg
agcatcgcccggcagatctcactgcgctccgaggcgtttttccacgccatgtcctcgcag
cacgagctgcaggaccggctggaagagacgcagcgggccgtggccgtcctgaggggccgc
accgccgccatcgaccgcgtcatgtgccaggggcctctgcgggccgtccgcaccgccctg
acgcgcaacaactgcgtgaagctgcacaacaagctgaagctgatggcggcggtgcatcag
acgcagccgacggtgcagctgctgctctccacctccgagttcgtcggagcgctggagctc
atctccaccaccaaggaggtgctgcagcaggagctgcagggaatccacagcttcagacat
ctgggctcccagctgtgcgagctggagaagctgattgataagatgatggtggaagatttc
agcatgtacgcccgcagcgacctgaaccgcagcctgaaggacgagcccctggtcctcgag
aaggtccacaacccaaacgctgcctcacagaaggagcgtctggagtccctggtgttcggc
ctgctacggcagaggaagctggactttctggacatttacagcgaggagatgatcctggcc
gccaaggccatcgtctctcagtgtgttgcggaaaacgttttgctcatagaagatattgac
actgaagtcgtcactaagctagccgaccagatgcgtctgatgacgttccctcagtggttt
gagctgctgaaaaccgtctttgagagtttccttctcttcctgcagaagatcaaggccact
ctgagcgtgatcaaaaacgtggttctggaggttctggcgtcgaaccagaggaaccggctc
ttggaggaggccgggtcggcgcctccggttcaggaggctcccgacggcctgtcgctgctg
cagggcgaggcggagctggcctacctcacacacgagggcctgttcatcagcgacgctctg
aacgaggcctccaggatccagcagagtcgggcggaggcagacggcagcgagtcggcgtcc
ggcgccacggagagcttcgtcagcagggagcaaagcttcatgtccggtgacaacatgatg
ccatccgatctggagctgaaccgcgtgatcaacaacatccaggagctgctgcacaccgcc
tccgacgtcagccacgaccgctgcgtcaaagtcctcacagccagagccaaggacggctct
ctggagcgtctgagctcggcggagttcgtgtgcctctctcgggcggtggagggtttcgtg
cgggacacggaggagctgtgcggcaggcgcagcgtctccctgaggggggcgctgcagagc
caggccaaccgcttcgtccaccgcttccacgaagaacgcaagaccaaactcagcctcctc
ctggacaacgagcgctggaaacaagcggaggttccttcagagttccaggacctggtgaac
tccatcgctgatggaagaataacactaccagagcggaaaatcccaggtccagaggacagg
aagcccactgagtttctgctcgtcaacgggcagaaatacgccgtcatcgggacggttctg
ctgctgatccggatctttctggaatactgtcagtgtgtgaacgatatcccatccatcgcc
accgacatgctgacgcgtctgtcggacctcctcaagcacttcaactctcggagttgccag
ctggttctgggagccggagctctgcaggttgtcggcctgaagaccatcaccactaaaaac
ctcgcattagcttcccgctgcctgcagctggtggttcactacattcccatcatcagagct
catttcgagaccaaactgcagcccaaacagttcagcgtcctcagacacttcgaccacatc
accaaggactacaacgatcacatagcagagatatccgctaagctggtggccatcatggac
agcctgtttgagaaggttttatcaaagtatgaagtgaaggctccgatgccgtcggcctgc
ttcagaaacgtctgtaaacaaatggccaagatgcacgaagccatttctgaactcttacct
gaagaacagacgcagatgttgtttctgaggattaatgccagttttaagttgcacctgaag
agacagctggctcgactcggggtcgttaatgacggaggaccacagaacgggtaa
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