Sander lucioperca (pikeperch): 116052189
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Entry
116052189 CDS
T07345
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03008
Ribosome biogenesis in eukaryotes
sluc03013
Nucleocytoplasmic transport
sluc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116052189 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
116052189 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116052189 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116052189 (xpo1a)
03009 Ribosome biogenesis [BR:
sluc03009
]
116052189 (xpo1a)
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116052189 (xpo1a)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116052189 (xpo1a)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116052189 (xpo1a)
Ribosome biogenesis [BR:
sluc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
116052189 (xpo1a)
Pre-60S particles
116052189 (xpo1a)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116052189 (xpo1a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
116052189 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
116052189
NCBI-ProteinID:
XP_031158579
Ensembl:
ENSSLUG00000009410
LinkDB
All DBs
Position
4:22172357..22199735
Genome browser
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFSQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIGGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRVAYANGKDDEQNFIQNLSLFLCTFLKEHGQLVEKRSNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHSQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQELLIEKYMLLPNQVW
DSIIQQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
NPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagaaatgacgatgttggccgatcacccagccagacagctgcttgacttcagt
cagaaactggacatcaacctgttggacaatgttgtcaactccatgtaccacgacatcgga
tcccagcaacgagtggcccaggaagtcctcaccaacctgaaggaccatccagacgcctgg
acgagggtcgacaccatcctggagttctctcagaacatgaaaactaaatattatgcactg
cagattctggagacggtcatcaaaacacgctggaagattctccccagaaatcagtgtgaa
ggcatcaagaagtatgttgttgggttgatcatcaagacttcttctgatcccgcgaacatg
gagaaagagggagtgtacatatcaaaactcaacatgatcctcgtacagatcctgaagcag
gaatggcccaaacactggcccaccttcatcagtgatatcgtgggcgcgagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaaactgctcagcgaggaggtttttgac
ttctccagtggccagatgacccaggtgaaggccaagcacctcaaagacagcatgtgcaac
gagttctcccaaatattccagctgtgccagtttgtgatggaaaactcccaaaatgccccg
ctggtccacgccacgctggagacgctcctccgcttcctgaattggattcctttaggttac
atcttcgagaccaagctcatcagcactctggtctacaagttcttgaacgtgcccatgttt
cgcaacgtgacgctaaaatgtttgacggagatcggtggagtgagcgtcaaccagtacgag
gagcagtttgtcaacctttttaccctcaccatgtgccagctcaaacagatgcttcctttg
aacactaacatcagagtggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagaacacggccagctcgtcgagaagaga
tccaacctgcgagagacactcatggaggccctgcactacatgctgctggtgtcggaggtg
gaggagacggagatctttaagatctgcctggagtactggaaccacctggcagccgagctc
tacagggagagtcctttctccacctccagcaccccgctgctttccgacgtcccgccacgc
agacacctgtacctgcctgtactctcccaggtgcgtttgctgatggtcagccgcatggcc
aaaccagaggaggtgctggtggtggagaacgaccagggcgaggtggtcagggagttcatg
aaggacacagacgccattaacctttacaagaacatgagggagactctcgtgtatctgacc
catctggactacgccgacactgaacgcatcatgacggagaagctccacagccaggtgaac
ggcaccgagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagc
ggggcgatgcacgaagaggacgagaagaggttcctggtcaccgtcatcaaggacctgctt
ggcctgtgcgagcagaaaagagggaaggacaacaaggccatcatagcgtctaacatcatg
tacatcgtgggccagtatcctcgcttcctccgagcccactggaagttcctcaagactgtc
gtcaacaagctgtttgagttcatgcacgagacccacgacggtgtgcaggacatggcgtgc
gacaccttcatcaagatcgcccagaagtgccggcgtcattttgtccaggtccaggtgggc
gaggtgatgcccttcatcgacgagatcctcaacaatatcaacaccatcatctgtgacctg
cagccacagcaggtccatacgttttacgaggccgttggctacatgattggagctcagacg
gaccaggcagttcaggagcttctgatagagaagtacatgctgctgcctaaccaggtgtgg
gacagcatcatccagcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgtcagctgggcagcatcctaaagacaaacgtcagagcctgtaaagctgtcggtcatccc
tttgttgttcagctgggacgaatctatctggacatgctcaacgtctacaagtgtctgagt
gaaaacatctcctcggctgtccagaccaacggtgagatggtgaccaaacaacctctgatc
aggagtatgaggacagtgaagagagagacattgaagctgatctctggctgggtcagccgc
tccaacgaccctcagatggtggcagagaactttgtgccccccctgctggaggccgtgctc
atcgactatcagaggaacgtcccggctgcccgggagcccgaggtcctcagcaccatggcg
accatcgtcaacaagctgggagtccacatcacgggagaaatccccaagatcttcgacgct
gtcttcgagtgcactttgaacatgatcaacaaggactttgaggaattccccgaacacaga
acccatttcttctaccttcttcaagcagccacgtctcagtgctttcccgccttcctgtcc
atcgccccggcacagttcaaactcatcctggactctatcatctgggccttcaagcacacg
atgaggaatgtcgccgacacaggtctacagatcctgtacactctcctgcagaacgtatcc
ggagaggaggcagcagcgcagagcttctaccagacgtacttctgtgacatcctacaacac
atcttctccgtggtcaccgatacctcgcacactgcagggctgaccatgcacgccaccatc
ttggcctacatgtttaacctggtggaagaagggaaggtcagcgttgctcttagcgccgcc
aatccggccaacaaccaggcgcacgtccaggagtacatcgccaacctgctgaagacggcc
ttcccccatctgcaagatgcccaggtgaaggtgtttgtaacgggtctgttcagtctgaat
caggacatccccgccttcaaggagcacctgagggacttccttgtccagatcaaggagttt
gccggcgaggacacgaccgacttgttcctggaggagagggagacgtctctgcgccaagcc
caggaggagaaacacaagctccagatgtccgtgcccggcatcctcaacccgcacgagctg
ccggaggagatgtgcgactga
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