KEGG   Sander lucioperca (pikeperch): 116052295
Entry
116052295         CDS       T07345                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03420  Nucleotide excision repair
sluc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116052295 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116052295 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sluc04121]
    116052295 (cul4b)
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116052295 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sluc04147]
    116052295 (cul4b)
Ubiquitin system [BR:sluc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     116052295 (cul4b)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      116052295 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      116052295 (cul4b)
Exosome [BR:sluc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116052295 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 116052295
NCBI-ProteinID: XP_031158722
Ensembl: ENSSLUG00000021636
UniProt: A0A8D0AD22
LinkDB
Position
1:complement(28549092..28561446)
AA seq 868 aa
MFPTGLSSPNPPPPPTQEARPAATDVKNDSGNITSPKKRKINGSEREDTSDTISSSPPKT
LNSSSSSSSSSSSSPCSPTSLHIQKKLRFEDSVDFIGLDVKMAEEGAAASCSNNKSKAVF
LPGGVGHHANGLTKPAGSGTFSNSKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVE
AIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLF
LKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSK
TIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLM
QQREVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLL
DENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDK
VDHVIDICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEK
MLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKL
EGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQ
EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEYKEGKKELQVSLFQTLVLLMFNEGEEFTLE
EIKLATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQ
IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPAD
LKKRIESLIDRDYMERDKENPNQYNYVA
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccaccaacccaggaggctaga
ccagcggctactgatgtcaaaaacgacagcggtaacattacgtctccgaagaagaggaaa
ataaacggctcagagagggaagacacttctgacacgatctcttcctcgcctcccaagacc
ctgaattcctcctcctcttcttcttcttcctcctcctcctccccctgctcccccacttcg
ctgcacatccagaagaagttaaggtttgaggattcagtggattttattggactggatgtt
aaaatggctgaggagggtgctgctgcttcgtgctctaataacaaaagcaaagccgtgttc
ctgcccggtggcgtgggacaccatgcaaacggactgacgaagcccgcaggatccggcacc
ttttctaacagtaaacccggtgctgccaagaaactagtcatcaagaacttcaaagaaaag
cccaaattgccagagaactacacgcaggagacgtggcagaagctgaaggaggcagtggag
gccatacagaacagcacttcaattaagtacaatctagaggagctctatcaggctgttgag
aacctgtgctcccataagatatctgccaaactttacaaacagctgagggccgtgtgtgaa
gaccatatcaaggcacaaattgatcaattcagagaggatgccctggacagtgtgcttttc
ctaaagaaaattgacaagtgctggcaagatcactgcagacaaatgatcatgattaggagt
atatttttgtttttggaccgcacctatgttttacaaaattcaatgctgccatcaatctgg
gacatgggtctggagctgttcaggttctacatcatcagtgatctgaaggtccagagtaaa
actatcgacgggattctgctgctcattgagagggagcgaaacggagaggcgatagaccgc
agtctactgaggagcctgctgagcatgctctctgacctgcagatttatcaggactctttt
gagcaacgctttttggaggaaactaatcgactgtacgctgcagagggacagaggctgatg
cagcagagagaggtcccagaatatctccatcatgtcaacaagcgcttagaggaggaggct
gacagagtcatcacatatctggaccagagcacacaaaaaccgctcattgctactgtggag
aagcagttgctgggtgaacatctcacggctactctgcaaaaagggctgactcacctgctg
gacgagaacagaattcaggatctgtctcttctctatcagctcttcagtcgagtgcgaggt
ggcgtccaggtcctcctgcagcactggatagagtacataaaggcttttggaagcacaatc
gtaatcaatccagaaaaagacaaaacaatggtgcaagagttgctggacttcaaagacaag
gtcgatcacgtcatcgacatatgcttcatgaagaacgagaagtttgtcaacgccatgaag
gaggctttcgaaacattcatcaacaaacggccaaataaacctgcagagctcatagcaaaa
catgtggattcaaagctaagggcaggaaacaaagaagcaacagatgaagaactggagaag
atgctggataagatcatgattatttttagattcatctatggaaaagacgtttttgaggcc
ttttataaaaaggatctggccaagaggttgctggttggaaaaagcgcctctgtagatgct
gaaaaatcgatgttgtcaaagctgaaacatgaatgtggagcagcgttcactagcaaactg
gaggggatgttcaaggatatggagctttctaaagacatcatggtgcagttcaaacagtat
atgcagtgccaaaacattcctggcaacattgagctgacggtgaacattctcacgatgggt
tactggccaacctatgtcccgatggaagtgcacctgcctcctgagatggtgcgactgcag
gagatcttcaagaccttctacctgggcaaacacagtggcaggaagctgcagtggcagtca
acactcggccattgtgtcttaaaagctgaatataaagagggcaagaaggagctgcaggtg
tcacttttccaaacacttgtgctactgatgtttaacgaaggagaggagttcaccctggag
gagatcaaactggcaacaggaatagaggacagtgaactgcgccggactctgcagtcactt
gcttgtggaaaagcgcgtgtcctcaccaaaatccccaaaagcaaagatgtggaggacggg
gataagttttcttgcaatgatgacttcaaacacaagctcttcaggatcaaaataaaccag
atccagatgaaagaaacggtggaggagcaagccagtaccacagaaagggtgtttcaggat
cgtcagtatcagatcgatgctgccatcgtgcgaatcatgaagatgaggaagactctgagc
cataatctcttgatgtctgaagtgtacaaccagcttaaattccctgtcaagcctgctgac
ttgaagaagaggatagagtctcttattgacagggactatatggagcgtgacaaggagaac
cccaaccagtacaactatgtggcttag

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