KEGG   Sander lucioperca (pikeperch): 116052471
Entry
116052471         CDS       T07345                                 
Name
(RefSeq) protocadherin beta-16-like
  KO
K16494  protocadherin beta
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sluc04515]
    116052471
Cell adhesion molecules [BR:sluc04515]
 Cadherins
  Protocadherins
   116052471
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th 7TM_GPCR_Sri Bact_surface_Ig-like Big_9
Other DBs
NCBI-GeneID: 116052471
NCBI-ProteinID: XP_035861933
LinkDB
Position
1:54265515..54268135
AA seq 830 aa
MMACMWITARRGRWQPLFVILCLFKLSSVTGQARYSVPEEQAEGSFVGNIARDLGLDVAR
LLSGKARIITKGSRQYVDLNRDKGTLVIKERIDREELCGKTTPCSFSFEVILENPIQLYR
VTVEVIDINDNSPSFQKDEINLKIVENAASGTRFSLVSADDPDVGINDIQKYTLKPSDNL
KLEVQSQSHGGKLIEMVLQNPLDREKEETHTLVLIASDGGEPHRSGTVRIHITVLDANDN
APVCSQPVYKADVQENSPEGTVVTTVSASDADKGHYGEVTFSIAHIAREANQLFEVNANT
GEIKVAGKLDFEKSKTYQLNVQASDHGGFSDTCKVVIQIIDENDNVPTIQLMSFSNSISE
DSPPGTTIAVINVDDEDSDGNGVVKCSINSDIPFKIESSLTGYYTIVTEDVLDRESISEY
NITITVSDQGSPALTSSKNINVKVSDVNDSPPKFDQSEYSKTVPENNSPGFSVFTISAKD
ADWGQNARVSYFLEEKEINGVAVSSLVSVNSENGVIHAVRSFDYEQIKWFEFNVTARDAG
SPPLSSVATVKILIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSG
QNAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVI
VNVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWR
QSRILYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGRAGSQNVLI
MDPSSTGTMQRIQSEKNILDEPDSPLEVRCNAQSLYLFKHCFSEIKCISQ
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgatggcgtgtatgtggataactgctcgcagaggccgatggcaaccactgtttgtcatt
ctttgtcttttcaagctgagctcagtgactggacaggctcggtattccgtaccagaggag
caggcagaagggtcttttgttggaaacattgctagagatttaggattggatgtggcgagg
ctcttatcaggtaaagctcgtattattacaaaaggaagccgacagtatgttgatttaaac
cgagacaaaggcacccttgttattaaagagcgaatcgaccgagaagagctgtgtggaaag
acgacgccctgtagcttcagttttgaggtgattttagaaaatccaatccagctttatcgg
gtaacagtggaggtaatagacataaacgataacagtccgtcgtttcaaaaggatgaaatc
aatttgaaaatagttgaaaatgctgcatcagggactcgcttctctttggtgagtgcagac
gaccctgatgttggtattaatgatattcaaaaatatacacttaaaccctcagataattta
aaattggaagtacagagccagtctcatggaggaaaattgatcgaaatggttttacaaaac
ccgttagaccgagagaaagaggagactcacacactcgtactgattgcttcagatggaggg
gagccacacagatcagggacagtgcgtattcatatcactgtgctagatgctaacgataat
gcgccagtgtgcagccagcctgtttataaagcagatgtccaggagaattctcctgaagga
acagtggtaaccactgttagtgcaagtgacgcagataaaggacattatggcgaggtgaca
ttttctatagctcatatcgccagagaggcaaaccagctttttgaagtaaatgctaacact
ggagagattaaagttgcaggtaaactagattttgaaaaatctaagacttatcaattaaat
gttcaagccagtgaccacggggggttttcagatacgtgcaaagttgttattcaaataatt
gacgagaatgacaacgtccctacaatacagctgatgtcattttctaactcgatatctgag
gattctcctccaggtacaactatagctgtcatcaacgttgatgacgaagactctgatggt
aacggtgttgtcaaatgctccattaactctgacatacctttcaaaatcgagtcttcatta
acaggatattatactatagtcaccgaagacgtcttagacagagaaagtatttctgagtat
aacatcaccataaccgtctctgaccaaggctctccggctctgactagcagtaaaaacatc
aatgtgaaagtgtctgacgttaatgacagcccacccaaatttgaccaatcagaatatagt
aagactgtaccagagaacaactctcctggattttctgtatttactatcagtgctaaagat
gcagactggggccaaaacgctcgggtttcttattttctggaagagaaagagattaatggg
gtagcagtgtcttcgttagtgtcagtaaattcagaaaatggtgtcattcatgcagtgagg
tcgtttgattatgagcaaatcaagtggtttgaatttaacgtaactgctcgtgatgctgga
tcccctcctctgagttcagtggctacagttaaaatactgatccaggaccagaacgacaac
cctcctcaggttctgtacccagtccagactggtggctctctggtggctgaaatggtgcct
cgttcagcagatgtgggctatctggtcactaaagtggtggctgttgatgtggactctgga
cagaatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataagaactatccgccaagtcactgataaagatgctgtgaaa
caaagactgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcatt
gttaacgtggcggtggcggacagcttccctgaagtgctgtctgagttcactgactttaca
cacgacaaggagtacaatgacaacctgactttttacttagtgttggctttggctgtagtt
tccttcctcttcatcacgtgtttagtggttattatatcagtgaaaatctacagatggaga
cagtctcgaatcttgtatcactccaatctccccgtgattccatattatccaccacgttac
tcagacactttggggacagggactctccaacacgtgtacaattacgaggtgtgcaggacg
actgactccagaaagagtgactgtaagttcggcagagctggtagtcagaacgtgctgata
atggaccccagttctacagggacgatgcagcggatacagagtgagaagaacatcctggat
gaaccagactctcctctagaggtgaggtgcaatgcgcaaagtctttacctattcaaacat
tgtttctctgaaattaagtgtatatcgcaatag

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