Sander lucioperca (pikeperch): 116052471
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Entry
116052471 CDS
T07345
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116052471
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Protocadherins
116052471
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
7TM_GPCR_Sri
Bact_surface_Ig-like
Big_9
Motif
Other DBs
NCBI-GeneID:
116052471
NCBI-ProteinID:
XP_035861933
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Position
1:54265515..54268135
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AA seq
830 aa
AA seq
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MMACMWITARRGRWQPLFVILCLFKLSSVTGQARYSVPEEQAEGSFVGNIARDLGLDVAR
LLSGKARIITKGSRQYVDLNRDKGTLVIKERIDREELCGKTTPCSFSFEVILENPIQLYR
VTVEVIDINDNSPSFQKDEINLKIVENAASGTRFSLVSADDPDVGINDIQKYTLKPSDNL
KLEVQSQSHGGKLIEMVLQNPLDREKEETHTLVLIASDGGEPHRSGTVRIHITVLDANDN
APVCSQPVYKADVQENSPEGTVVTTVSASDADKGHYGEVTFSIAHIAREANQLFEVNANT
GEIKVAGKLDFEKSKTYQLNVQASDHGGFSDTCKVVIQIIDENDNVPTIQLMSFSNSISE
DSPPGTTIAVINVDDEDSDGNGVVKCSINSDIPFKIESSLTGYYTIVTEDVLDRESISEY
NITITVSDQGSPALTSSKNINVKVSDVNDSPPKFDQSEYSKTVPENNSPGFSVFTISAKD
ADWGQNARVSYFLEEKEINGVAVSSLVSVNSENGVIHAVRSFDYEQIKWFEFNVTARDAG
SPPLSSVATVKILIQDQNDNPPQVLYPVQTGGSLVAEMVPRSADVGYLVTKVVAVDVDSG
QNAWLSYKLQKATDRALFEVGLQNGEIRTIRQVTDKDAVKQRLTVIVEDNGQPSRSATVI
VNVAVADSFPEVLSEFTDFTHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWR
QSRILYHSNLPVIPYYPPRYSDTLGTGTLQHVYNYEVCRTTDSRKSDCKFGRAGSQNVLI
MDPSSTGTMQRIQSEKNILDEPDSPLEVRCNAQSLYLFKHCFSEIKCISQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtgtatgtggataactgctcgcagaggccgatggcaaccactgtttgtcatt
ctttgtcttttcaagctgagctcagtgactggacaggctcggtattccgtaccagaggag
caggcagaagggtcttttgttggaaacattgctagagatttaggattggatgtggcgagg
ctcttatcaggtaaagctcgtattattacaaaaggaagccgacagtatgttgatttaaac
cgagacaaaggcacccttgttattaaagagcgaatcgaccgagaagagctgtgtggaaag
acgacgccctgtagcttcagttttgaggtgattttagaaaatccaatccagctttatcgg
gtaacagtggaggtaatagacataaacgataacagtccgtcgtttcaaaaggatgaaatc
aatttgaaaatagttgaaaatgctgcatcagggactcgcttctctttggtgagtgcagac
gaccctgatgttggtattaatgatattcaaaaatatacacttaaaccctcagataattta
aaattggaagtacagagccagtctcatggaggaaaattgatcgaaatggttttacaaaac
ccgttagaccgagagaaagaggagactcacacactcgtactgattgcttcagatggaggg
gagccacacagatcagggacagtgcgtattcatatcactgtgctagatgctaacgataat
gcgccagtgtgcagccagcctgtttataaagcagatgtccaggagaattctcctgaagga
acagtggtaaccactgttagtgcaagtgacgcagataaaggacattatggcgaggtgaca
ttttctatagctcatatcgccagagaggcaaaccagctttttgaagtaaatgctaacact
ggagagattaaagttgcaggtaaactagattttgaaaaatctaagacttatcaattaaat
gttcaagccagtgaccacggggggttttcagatacgtgcaaagttgttattcaaataatt
gacgagaatgacaacgtccctacaatacagctgatgtcattttctaactcgatatctgag
gattctcctccaggtacaactatagctgtcatcaacgttgatgacgaagactctgatggt
aacggtgttgtcaaatgctccattaactctgacatacctttcaaaatcgagtcttcatta
acaggatattatactatagtcaccgaagacgtcttagacagagaaagtatttctgagtat
aacatcaccataaccgtctctgaccaaggctctccggctctgactagcagtaaaaacatc
aatgtgaaagtgtctgacgttaatgacagcccacccaaatttgaccaatcagaatatagt
aagactgtaccagagaacaactctcctggattttctgtatttactatcagtgctaaagat
gcagactggggccaaaacgctcgggtttcttattttctggaagagaaagagattaatggg
gtagcagtgtcttcgttagtgtcagtaaattcagaaaatggtgtcattcatgcagtgagg
tcgtttgattatgagcaaatcaagtggtttgaatttaacgtaactgctcgtgatgctgga
tcccctcctctgagttcagtggctacagttaaaatactgatccaggaccagaacgacaac
cctcctcaggttctgtacccagtccagactggtggctctctggtggctgaaatggtgcct
cgttcagcagatgtgggctatctggtcactaaagtggtggctgttgatgtggactctgga
cagaatgcctggctctcctataaactgcagaaagccacagacagggcgctgtttgaagtg
ggcttacagaatggagaaataagaactatccgccaagtcactgataaagatgctgtgaaa
caaagactgactgttatagtggaggacaacgggcagccctctcgttcagctacagtcatt
gttaacgtggcggtggcggacagcttccctgaagtgctgtctgagttcactgactttaca
cacgacaaggagtacaatgacaacctgactttttacttagtgttggctttggctgtagtt
tccttcctcttcatcacgtgtttagtggttattatatcagtgaaaatctacagatggaga
cagtctcgaatcttgtatcactccaatctccccgtgattccatattatccaccacgttac
tcagacactttggggacagggactctccaacacgtgtacaattacgaggtgtgcaggacg
actgactccagaaagagtgactgtaagttcggcagagctggtagtcagaacgtgctgata
atggaccccagttctacagggacgatgcagcggatacagagtgagaagaacatcctggat
gaaccagactctcctctagaggtgaggtgcaatgcgcaaagtctttacctattcaaacat
tgtttctctgaaattaagtgtatatcgcaatag
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