Sander lucioperca (pikeperch): 116052514
Help
Entry
116052514 CDS
T07345
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116052514 (pcdh19)
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Protocadherins
116052514 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Motif
Other DBs
NCBI-GeneID:
116052514
NCBI-ProteinID:
XP_031159130
Ensembl:
ENSSLUG00000020738
LinkDB
All DBs
Position
1:complement(28135023..28190122)
Genome browser
AA seq
1098 aa
AA seq
DB search
MQTKEMELIQLIAFFLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFKIALQP
PYLKVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSDSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGTKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPINTLVVDLNATDPDEGTNGEIVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGILDYETAQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSVNTEMVEVS
ENAQRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFYTILVDGRLDREQKDTY
NLTIQAEDSGMPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAIKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPIPARAKSPEHGRNVIALSIEA
TTVDVPHYENGTTKRTFATFGKDGPEDVERGEFKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPVSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggaattaatacaattaattgctttcttcctcttattctgggtc
ggggctgaggctgtaatcaacctaaagtatggaataaacgaagagatgaagcccgggtca
gtaattggaaacgtgacaaaggacgcactaaagcaaggatttaagattgcactccagccc
ccatacttaaaggttatttccaattcagagccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatagatcgggacgtagtttgtcgacagaatccaaagtgc
attatttccttagaagtgatgtcagactctatggagatctgtgtcatcaaagttgaaatt
gaggatttaaacgataacgcacctagattcccaacgagccacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atctttggagtgcaatcatattctatcaccccaaatgagcttttcggactagaaataaag
accagaggggatgggaccaaaattgctgagcttgttgtgcaaaaatcgttagacagggag
acccagtcccactatacatatgaaatcagcgcagaagatggaggagaccctcctaagata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaacaacccagtttttgac
gagccagtgtatactgttaatgtgatggagaattcccccatcaatacattagtggtagac
ttgaatgcaacggatcccgacgagggcactaacggagagattgtgtactcgttcaacagt
tacgtcaccgagaaaacgagggatgtgtttaaaattgaccccagaaccgggatcatcact
gtcaacggtattttggattatgaaacggcgcaaatatatgagatcgacgtccaggccaaa
gatttaggtcccaactctatcccagctcactgcaaagtcacagtgaatgtgatggacacg
aacgataacccacctgtcatcagtttactctctgtgaacacagagatggtcgaagttagt
gaaaacgcgcagcgtggatatgtcatagcgctagtgagggtgtcagataaggatgctggg
gcaaacggcaaagtgcagtgcaggctgcagggcaatgttcctttcagacttcaagaatat
gagagcttctacactatacttgttgatggcaggctggacagagagcaaaaggacacatac
aacctgactatccaagcggaggacagtggcatgcctcctttacgcgccacaaagtctttg
gtagtcaaagtcacagatgaaaatgacaaccctccccacttccttaaaccacactatcaa
gagatggtgatggaaaacaacctccctggttcatgtctgctagcagtgtcagcagaagac
ccggacctggggatgaatggcacagtttcctactccatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagtgttggccagagacaatggtaat
ccctctctatcaagtaacgctacggtgcgtattgttgtcttggatgtcaacgataacaca
cctgttatgacaaaccctccactagttaatggcacagcggaggtttccatcccaagaaac
gctggggtgggttacatggtgacccaagtcaaagcagacgactatgatgagggggagaac
gggcggctgacctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgccaaatccacctacgagatc
acagtggtggcgagggaccacggcaagccctccctgtccgcctcggcctacatcgtggtg
tacctctcaccagatctgaacgcacaggagtctattggacctgtaaacctgtccctcatc
ttcatcatcgccctgggctctatcgcagccatcctgtttgtcaccatgatatttgtggcg
atcaagtgcaagagggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcctggtgccacgtgacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcactgggcagggccaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcgacattcaag
gacctggaggggaacagtctgaaggacagcggccacgaggagagcgaccagaccgacagt
gaacatgatgtccagagaggacactatgttgacacggctgtcaatgacgtgctgaacatg
actgtcccccccaatgtttgccagctgccagaccaagatcccagcgaaggctttcactgc
caggacgagtgtcgcatcctaggccactctgaccgctgttggatgcctcgtgtcccaatc
ccagcgcgtgccaagtcacccgagcacggccgtaatgtcatcgctttgtctattgaggcc
accacagtggacgtgccccactacgagaatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggcctgaggacgtggaacggggagagtttaagggaaagcggactcaggag
tctcaggtgtgtagccccaaggccaatggaggggctgtccgtgaagctggcaatgggcgc
gaggcagccagccccatcacttcccctgtgcacctgaagagccctgtgtccaagccgtca
tctgcctacaacacgctgaaatgccgcgatgcagagcgaatcgccaaccacagcctgctg
cggcagccggaggggaaggacagtgagccagctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
DBGET
integrated database retrieval system