KEGG   Sander lucioperca (pikeperch): 116052514
Entry
116052514         CDS       T07345                                 
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
  KO
K16499  protocadherin delta 2
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:sluc04515]
    116052514 (pcdh19)
Cell adhesion molecules [BR:sluc04515]
 Cadherins
  Protocadherins
   116052514 (pcdh19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 PepSY
Other DBs
NCBI-GeneID: 116052514
NCBI-ProteinID: XP_031159130
Ensembl: ENSSLUG00000020738
LinkDB
Position
1:complement(28135023..28190122)
AA seq 1098 aa
MQTKEMELIQLIAFFLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFKIALQP
PYLKVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSDSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGTKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPINTLVVDLNATDPDEGTNGEIVYSFNSYVTEKTRDVFKIDPRTGIIT
VNGILDYETAQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSVNTEMVEVS
ENAQRGYVIALVRVSDKDAGANGKVQCRLQGNVPFRLQEYESFYTILVDGRLDREQKDTY
NLTIQAEDSGMPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAIKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPIPARAKSPEHGRNVIALSIEA
TTVDVPHYENGTTKRTFATFGKDGPEDVERGEFKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPVSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq 3297 nt   +upstreamnt  +downstreamnt
atgcaaaccaaggagatggaattaatacaattaattgctttcttcctcttattctgggtc
ggggctgaggctgtaatcaacctaaagtatggaataaacgaagagatgaagcccgggtca
gtaattggaaacgtgacaaaggacgcactaaagcaaggatttaagattgcactccagccc
ccatacttaaaggttatttccaattcagagccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatagatcgggacgtagtttgtcgacagaatccaaagtgc
attatttccttagaagtgatgtcagactctatggagatctgtgtcatcaaagttgaaatt
gaggatttaaacgataacgcacctagattcccaacgagccacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atctttggagtgcaatcatattctatcaccccaaatgagcttttcggactagaaataaag
accagaggggatgggaccaaaattgctgagcttgttgtgcaaaaatcgttagacagggag
acccagtcccactatacatatgaaatcagcgcagaagatggaggagaccctcctaagata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaacaacccagtttttgac
gagccagtgtatactgttaatgtgatggagaattcccccatcaatacattagtggtagac
ttgaatgcaacggatcccgacgagggcactaacggagagattgtgtactcgttcaacagt
tacgtcaccgagaaaacgagggatgtgtttaaaattgaccccagaaccgggatcatcact
gtcaacggtattttggattatgaaacggcgcaaatatatgagatcgacgtccaggccaaa
gatttaggtcccaactctatcccagctcactgcaaagtcacagtgaatgtgatggacacg
aacgataacccacctgtcatcagtttactctctgtgaacacagagatggtcgaagttagt
gaaaacgcgcagcgtggatatgtcatagcgctagtgagggtgtcagataaggatgctggg
gcaaacggcaaagtgcagtgcaggctgcagggcaatgttcctttcagacttcaagaatat
gagagcttctacactatacttgttgatggcaggctggacagagagcaaaaggacacatac
aacctgactatccaagcggaggacagtggcatgcctcctttacgcgccacaaagtctttg
gtagtcaaagtcacagatgaaaatgacaaccctccccacttccttaaaccacactatcaa
gagatggtgatggaaaacaacctccctggttcatgtctgctagcagtgtcagcagaagac
ccggacctggggatgaatggcacagtttcctactccatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagtgttggccagagacaatggtaat
ccctctctatcaagtaacgctacggtgcgtattgttgtcttggatgtcaacgataacaca
cctgttatgacaaaccctccactagttaatggcacagcggaggtttccatcccaagaaac
gctggggtgggttacatggtgacccaagtcaaagcagacgactatgatgagggggagaac
gggcggctgacctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgccaaatccacctacgagatc
acagtggtggcgagggaccacggcaagccctccctgtccgcctcggcctacatcgtggtg
tacctctcaccagatctgaacgcacaggagtctattggacctgtaaacctgtccctcatc
ttcatcatcgccctgggctctatcgcagccatcctgtttgtcaccatgatatttgtggcg
atcaagtgcaagagggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcctggtgccacgtgacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcactgggcagggccaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcgacattcaag
gacctggaggggaacagtctgaaggacagcggccacgaggagagcgaccagaccgacagt
gaacatgatgtccagagaggacactatgttgacacggctgtcaatgacgtgctgaacatg
actgtcccccccaatgtttgccagctgccagaccaagatcccagcgaaggctttcactgc
caggacgagtgtcgcatcctaggccactctgaccgctgttggatgcctcgtgtcccaatc
ccagcgcgtgccaagtcacccgagcacggccgtaatgtcatcgctttgtctattgaggcc
accacagtggacgtgccccactacgagaatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggcctgaggacgtggaacggggagagtttaagggaaagcggactcaggag
tctcaggtgtgtagccccaaggccaatggaggggctgtccgtgaagctggcaatgggcgc
gaggcagccagccccatcacttcccctgtgcacctgaagagccctgtgtccaagccgtca
tctgcctacaacacgctgaaatgccgcgatgcagagcgaatcgccaaccacagcctgctg
cggcagccggaggggaaggacagtgagccagctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag

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