Sander lucioperca (pikeperch): 116052517
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Entry
116052517 CDS
T07345
Symbol
vimr2
Name
(RefSeq) peripherin
KO
K07606
vimentin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116052517 (vimr2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116052517 (vimr2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116052517 (vimr2)
04147 Exosome [BR:
sluc04147
]
116052517 (vimr2)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
116052517 (vimr2)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116052517 (vimr2)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116052517 (vimr2)
Exosomal proteins of other cancer cells
116052517 (vimr2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ATG16
TPR_MLP1_2
PI3K_P85_iSH2
KASH_CCD
CT398_CC
FlaC_arch
RNase_E_G
FlxA
Motif
Other DBs
NCBI-GeneID:
116052517
NCBI-ProteinID:
XP_031159142
Ensembl:
ENSSLUG00000022627
LinkDB
All DBs
Position
1:28614916..28632426
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AA seq
390 aa
AA seq
DB search
MTMLRVSSYRKLFEDDSWSRNGGLSMQCAGQCRASVRGAAINECNCEKLDFVAAKALNKE
GLNRFVQERNIIAALNDRLVRLIELAHCFEEENESLECQIVELEEKLNSRQAASSITSTV
AEPDYSLDAVVERLRRERDEILCDTEELQKELECLMKEYEKAAQQRIILQQGRQEVAEEV
DAVTAECLALREQVAIYEEQLANMEAQHTTEVESLLEPAEGATGAVAAIIFGSPDITPAL
VVKEYYCQLAENLQSECGASSSAVVRSGDGKQLEVGGAGGSTVKDLSKIKDINELKMLIS
ELQKELSELEKCNEELEDEVEMKTAAYIDEIAELECTIDEMRHQEADFQVQMKKQCEDYK
ELLSEKMARDMEITAYRSLVEEEEERLCNL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcagagtgtcttcttaccgcaagctgtttgaggatgatagctggagtcga
aatggagggttaagtatgcagtgtgcagggcagtgccgggcctctgtcaggggtgcggcc
attaacgagtgtaactgtgagaagttagacttcgtagctgccaaggcgctcaacaaggag
ggtctgaaccggtttgtccaggagcgcaacatcatcgcagccctcaacgaccgcctggtc
agacttattgaactggcccattgttttgaggaggagaatgagtctcttgaatgtcagatt
gttgaactagaggagaagctgaacagtcggcaagccgcctccagcatcacctccactgtg
gccgagcctgactacagtctggatgcagtggtggaaagactgcgcagggagagggatgag
attctgtgtgacacagaggagctgcagaaagagcttgaatgtctgatgaaagagtacgag
aaggctgcacagcagaggatcatcctccagcagggacgacaggaggttgctgaggaagtc
gatgctgtgacagcagagtgtttggcactgagggagcaagtggctatctacgaggagcag
ctggccaacatggaggcccagcacacaacggaagtggagagtctgctggagccagctgaa
ggggctacaggagctgtggcagctattatatttggcagccctgacatcactccagccctg
gttgtaaaggagtactactgccagctggccgagaacctccagtccgagtgtggtgcatcc
tcctctgctgttgttcgcagtggtgatggaaaacaactggaagtagggggagctggaggg
tcaacagtcaaagacttgtcaaagataaaggacatcaatgagctgaagatgctgatttca
gagctacaaaaggagctctctgagctggagaagtgtaacgaggagctggaggacgaggtt
gagatgaagacggctgcatatattgacgagattgctgagttggagtgtactattgatgaa
atgcggcaccaggaggccgacttccaagtgcagatgaagaagcagtgtgaagactacaag
gagctgctcagtgagaagatggccagagacatggaaattactgcttacaggagtctggtg
gaggaagaggaggagcggctgtgcaacctgtga
DBGET
integrated database retrieval system