Sander lucioperca (pikeperch): 116052771
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Entry
116052771 CDS
T07345
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04080
Neuroactive ligand-receptor interaction
sluc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116052771 (gabra6b)
04082 Neuroactive ligand signaling
116052771 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116052771 (gabra6b)
Ion channels [BR:
sluc04040
]
Ligand-gated channels
GABA-A
116052771 (gabra6b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
116052771
NCBI-ProteinID:
XP_031159459
Ensembl:
ENSSLUG00000025229
UniProt:
A0A8D0DH60
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Position
13:22531475..22566623
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AA seq
476 aa
AA seq
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MLILKVDQGFLVVGCLRGMAFLLTCLFLSCASSVWGNQHVDTNIYLDNITRILDRLLDGY
DNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRL
NNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNF
PMDGHACPLKFGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSN
TGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAMK
VAAQESAAASAAAAAAPATGSDGEVSSVDASSVLKKRMNSAPLFDRPAKTFPNPPVNAQA
FLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDSV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttaaaagttgaccagggatttctagttgtggggtgtttgcgaggcatggct
ttccttttaacttgcttgtttctgtcttgtgcgagcagtgtttggggaaatcagcacgtt
gataccaatatctatttggataacatcacgcgcatattggatagattactggatggctat
gacaacaggctacgacctggatttggaggtccagttacagaggtcaaaactgacatcttt
gttaccagctttggtccggtttcagatgttgagatggaatacaccatggacgtattcttt
cgtcagacatggatcgacgaacggctaaaatttgaaggccccattgagatcctgcggctc
aacaacctgatggtcagcaagatatggacgccggacacctttttccggaatggcaagagg
tcgatctctcacaacatgaccacccccaacaagctgttccgcatcatgcagaacggaact
atcctctacaccatgagattaactataaatgcggagtgtcccatgcgtctgatgaacttc
ccgatggacggccatgcctgcccgctcaagtttgggagttatgcttaccccatcagcgag
attgtatacacttggaagaagggtcctctgtcctctgtggaggtgccacaggaatcatct
agtttgctgcagtacgacctcatcggtcagacagtgtcaagcgagaggctgaagtccaac
acaggtgaatatgtcatcatgacagtccacttccatctgcaaaggaaaatgggcttcttc
ctgattcagacttacattccctgtattatgactgtcatcctggcccaagtctctttctgg
attaataaggaatcagttccagctcggactgtgtttggtatcaccactgtcttgaccatg
acaacactcagtatcagcgctcgccactccctccccaaagtttcttacgccacagccatg
gattggttcatcgctgtttgctttgcctttgtcttctccgctctgattgagtttgcagcc
gtcaactacttctccactctgcaggccaaccgggagctgaggaaggcagcagccatgaaa
gtggcggcccaggagtcagcagctgcatctgcagctgcagctgcggctccagccacaggg
agcgacggagaggtttcctcagttgatgccagtagtgtgctaaagaagaggatgaactct
gccccgctgtttgaccgtcctgccaaaacatttcccaacccacctgtcaatgcccaagcc
ttcctgcagcagggttcagctgtaccggccaacaatgttctgactggcaccagcatcatc
gacaaatactcccgcatcctcttcccactttcgtttggcgccttcaacctggtctactgg
atcgtctatctcactaaggacacgatggagatgtccagggatagcgtttaa
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