Sander lucioperca (pikeperch): 116052917
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Entry
116052917 CDS
T07345
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116052917 (pdgfc)
04020 Calcium signaling pathway
116052917 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116052917 (pdgfc)
04540 Gap junction
116052917 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116052917 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116052917 (pdgfc)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Growth factors (RTK binding)
116052917 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
116052917
NCBI-ProteinID:
XP_031159616
Ensembl:
ENSSLUG00000010447
LinkDB
All DBs
Position
1:23766425..23813581
Genome browser
AA seq
364 aa
AA seq
DB search
MHVVIQTIPSTALCDRQPPLIQMILPLIFLLASLLQQYGSEAESTHVSKFHPPSVKEQNG
VQDSHQENIITVSGEGMVHSPDFPHTYPRNTALVWRLVSTSNMRIQLTFDDRFGLEDPED
GICKYDFVEIEDPTEKTILGRWCGSQSAPASHTSKGSQIRIRFISDEYFPTEPGFCIRYS
LLPVSVSEPEVPAVLPASQQGIEELSEAVAGLGTMEEVMQYLEPERWQLDMEELYKPTWH
VLGKSFIHNKKARGGADLNLLREDVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRC
GGNCACCSHRCYDCQCAPTRVTKKYHEVLLLKHQSGVRGLQKSMTDVPLEHHEECACVCK
DDWD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgtgatacaaaccatcccgtcaacagcgctttgtgatcgccaaccaccactc
atccaaatgatccttccattaatattccttcttgcatcgcttctccaacaatatggctcg
gaagctgaatcaactcatgtcagcaaatttcaccctccaagtgtaaaggagcaaaacgga
gtgcaagattcccatcaggagaatatcataacagtgtctggagagggaatggtccacagt
ccagacttcccacacacttatcccaggaataccgcgttggtctggagactagtgtcgacc
agtaatatgaggatccagctcacctttgatgacagatttggtctagaggaccccgaagat
ggcatatgcaaatacgactttgtggagatagaggatccgactgagaagaccatcctgggt
cgctggtgtgggtcacagtcggcaccagctagtcacacttccaaaggcagtcagatcagg
atccgcttcatctctgatgagtacttccccactgagccgggattctgtatccgctactcc
cttctgcctgtgagtgtatcagaacccgaagtccctgcggttctccctgcatcccagcag
ggtattgaagagttgtcagaggctgtggcagggctgggcaccatggaggaggtcatgcag
tacctggagccagagcgatggcagctggatatggaggagttatacaaacctacatggcat
gtgctggggaaatccttcatccataataagaaggccagaggaggagctgatctcaatctg
ttgagggaggacgttcgactgtacagctgcactccacgcaacttctctgtatccttgcgt
gaggagctgaagaggacagatgccattttctggccaagttgcctcctggtgaagcgctgt
ggtggaaactgtgcctgctgctcccaccgctgctatgactgccagtgtgctcccaccagg
gtcaccaagaaataccatgaggttctactgttgaaacaccaaagcggtgtcagaggcctg
cagaagtctatgactgatgtgcccttggagcaccatgaggagtgtgcctgtgtgtgtaaa
gatgactgggactga
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