KEGG   Sander lucioperca (pikeperch): 116052959
Entry
116052959         CDS       T07345                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03020  RNA polymerase
sluc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116052959 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116052959 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sluc03021]
    116052959 (polr2d)
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116052959 (polr2d)
Transcription machinery [BR:sluc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116052959 (polr2d)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116052959 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 116052959
NCBI-ProteinID: XP_031159684
Ensembl: ENSSLUG00000007763
UniProt: A0A8C9XYG3
LinkDB
Position
6:complement(20926331..20930105)
AA seq 144 aa
MATGSGAAPANVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcgactggaagcggcgcggctccggctaatgtcggagatgttgaagaagatgcttca
cagctgctgtttcctaaagagtttgagaacgcggagaccctgctgaactcggaggtgcac
atgctgctggagcaccgcaagcagcagaacgagagcgccgaggacgagcaggagctgtct
gaggtcttcatgaagacgctcaactacacggcccggttcagccgcttcaagaaccgcgag
accatcaccgccgtacgcagtctcctgctgcagaagaagctccataagtttgagttggcc
agtttagcaaatctgtgtcctgaagctgcagaagaggccaaagccctgatccccagtctg
gaggggaggtttgaagacgaggagctgcagcagatcctggacgacatccagaccaagaga
agtttccagtactga

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