Sander lucioperca (pikeperch): 116053042
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Entry
116053042 CDS
T07345
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sluc03009
]
116053042 (ddx49)
Enzymes [BR:
sluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116053042 (ddx49)
Ribosome biogenesis [BR:
sluc03009
]
Eukaryotic type
90S particles
Helicases
116053042 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
Laminin_B
Motif
Other DBs
NCBI-GeneID:
116053042
NCBI-ProteinID:
XP_031159767
Ensembl:
ENSSLUG00000013910
UniProt:
A0A8C9YWL7
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All DBs
Position
11:13128035..13135265
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AA seq
479 aa
AA seq
DB search
MADFSSLGLSDWLVKQCKQLGINKPTPVQENCMPPILEGRDCMGCAKTGSGKTAAFVLPV
VQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIIVGGMDMVSQALELSNQ
PHVVVATPGRLADHIRSSDTFSMSKIQFLILDEADRLLEQGCTDFTKDLETILATLPAKR
QTLLFSATLTDTLHELKNIAMNKPFFWESKSETRTVEELDQRYILTPEKVKDAYLVHLIQ
TFTDEHDDWSIIIFTNTCKDCQVLTMMLREFNFPTISLHSMMKQKQRFANLAKFKASVFK
ILVATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEGQIQTKLKEYPVEEKEVLKILTQVNVTRREIEIKLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELEKIRSQKKKFKLKIQESIQRQKHGQLKKKLIKRKQLKKKKAAQATA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttttcgtcgctgggtctctcagactggctggttaaacagtgtaaacagctg
gggatcaacaaacccactcctgtccaggaaaactgcatgccgcccatactagaaggtcgg
gattgtatgggctgtgctaagaccggaagtgggaagacagcagcgtttgtgctgccggtg
gtgcagaaactgtcagaggacccatatggcatcttctgcttggtgctcactccaaccagg
gagctcgcctatcagattgcagagcagtttcgagtcctggggaagccgctgggtctgaga
gactgcatcatcgtcggtggaatggacatggtgagccaagccctggagctgtccaaccag
ccacatgtagtcgtagcgacgcccgggcggctggctgatcacatccgcagctctgacacc
ttcagcatgagcaagatccagtttctaattctggacgaggcggaccggctgttggagcag
ggctgtactgacttcaccaaagacctggagacgatcctggctactttaccggctaaacgg
cagacgcttctgttcagcgccacgctcactgacaccctgcacgagctgaagaacatcgcc
atgaacaaacctttcttctgggagagcaagtcagagacacggacagtggaggagctggac
cagaggtacatcctcactccagagaaggtaaaggacgcctacctggtccacttgatccag
acgtttactgacgagcatgacgactggtctatcatcatcttcaccaacacgtgcaaggac
tgccaagtcctcaccatgatgctgcgggaatttaactttccaaccatctccctgcactcc
atgatgaaacagaaacaacgatttgcaaacctcgccaagttcaaggccagcgtcttcaaa
atactggttgcgacagacgtagctgctaggggtttggatattccaactgtccaggtcgtc
atcaaccacaacacccccggtcttcccaagatctacatccacagagtcggacgaacagca
agagcagggaggaatggagtgtccatcacactggtgacgcagtacgacatccacctggtc
cactctattgaaggacagattcagacaaagctgaaggagtatcctgtggaggagaaagaa
gtcctgaagattctcacccaggtcaacgtgaccagacgggagattgaaataaaacttgag
tcaacagactttgatgagaaaaaggagatcaacaaaaggaaacagctgatcttggagggg
aaggatccagacctcgaggctaagagaaaagccgagctggagaagatcaggagccagaag
aagaagttcaaactaaaaatccaggagagcattcagagacagaaacatggacagctgaaa
aaaaaactgataaagagaaaacagttgaaaaagaaaaaagcagcacaagcaacagcatga
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