Sander lucioperca (pikeperch): 116053110
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Entry
116053110 CDS
T07345
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116053110
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116053110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116053110
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
116053110
Intermediate filaments
Intermediate filament-binding proteins
116053110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
TMP_3
Helical_needle
Motif
Other DBs
NCBI-GeneID:
116053110
NCBI-ProteinID:
XP_031159888
Ensembl:
ENSSLUG00000005732
LinkDB
All DBs
Position
5:complement(1388245..1495715)
Genome browser
AA seq
2711 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPSSSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDNCIEAE
KIINRYEALASDLLDWIEKTIAVISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQCFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMETEGYYDIRRILARKENILGQWSLLKELVAGRRTRLEKNLALQKTFQDMVYMI
DWMEDTQVQLLSKDFGKHLLEVDDLLQKHGLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAAKRRDELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQESIMEV
KGEWKRLEDQAAQRLGHLQEALNFFQFSTETDDLVVWLQDAYRLVYSEDFGHDEYSTQSL
LKKHRGVSEAIDKHRLHVVTLRKHMVLLPLRYREQEEVQVRMGEVEQLYTEVAEVAVLRQ
QWLHDALAVYRMFSEVNACELWIDEKEQWLDKMEIPERLEDVEMVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQDKRKAIDATQYMGSDLGGVLALQRRLSTMEGALSVLEPKLLHLQEEAEHM
ATAHPGRAMEVLVPFDGISVEWEELKRTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNNLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEASIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIKERIDTLANRGNQNRE
QAQQWLEKLNDQWELQRFLQDCHELGDWVCEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQQLIQEKPELSQVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLECQLAYVDQGQDLTTVNKQLKKLHTMESHMEEWYKEVGQLQAQ
VATIPQQTQTKETVAERQAIVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPMAMSQEHGSSLQAVQQLMKKNQTLQRELQGHRSRIEDVLERAGIIASIRSPEADCV
RAGHDQLAQLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQKEVVASSPELGQDYEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSEAATIAEWKDGVNEAWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVQARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQFWKELLTSCEECRVQITTETDKLRFFSMVR
DQIMWMESIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVEARRRSTLECIETGKTLLAAR
NPAAEEIKERLDKVVAKQYEMSEKWDKHWEFLQQLLEVHQFAQEAVVAEAWLTAQEPFIS
SNELGGSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQSKQPPTPLLGRK
VFLDPQDGSPNASTLPRLPISPVMRQTIYEQNEANSPPSPSPATPTPSPSSVACRLGSTV
ANYTPVMNGSSYRHTLEARHGGVVGVAAGLGQPAPSSIASVATAAMLVSANQARESASTA
RDQATKVMSHLQPVQTARTLEVKSSTYLRQPKIKHLDDAVTPLLVASRLEKARERERGRE
REMMMGEIGTERAEVAVMAEVVLQEPRERLHSEPTRGSRGSRTDLLGPTEPQGHTHHRIE
RQLSSEQLIQARRDELPQEVWREQAERRERRTLERQTSSEQEGHGSHEGRRRERDRHRPD
RQESSEHDTGKEHSDRRSAGGEKRSTMAEIVEQLQEREAAQARGEVPRVPNGVPEKSSRL
DRPRARDRPKPRRRPRPKEPGETTRRSRSAPAQSSPAVPQPPTHTAHHEGFLFRKLDIET
LKKSTNSRSWVNLYCVLKKGEMGFYKDAKNTATSYNNEPLLNLSHCHCDVTNGYKKKKNV
FTLKTKDGSEFLFHAKDEDDLKVWVTNITGSITEHEEIAKWGQPQPTTSSTDEGTRRDGS
KADNRSERGGERSDRADRIERADKEKEKEREKEKEREKEKEKERERGERSERSERGGKSD
AKRSEKSAKKK
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaagcagctcgggattctgggagacggagtgtaccagctccaagctgttcgag
tgctcccgcatcaaggccctggcagatgagcgagatgcggtgcagaagaagacttttacc
aagtgggttaactcccatctggccagagtgtcctgtcgcatagcagacctctacaacgac
ctgagggatggatacatgctcaccagactgttggaggtcctcagtggagagctgctgccg
aggcctacacggggtcgtatgcggattcactgcctggagaatgttgacaaagccctccag
ttccttaaagaacagagggttcacctggaaaatgttggttcccatgacattgtggatgga
aaccaccgtctcaccctgggccttatgtggaccatcatcctacgcttccagattcaggtg
atcaaaatagagacggaggacaacagagaaactcgttctgccaaggatgccctgctgctc
tggtgccagatgaagacggcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcatacacagacacaggcctgacctgattgag
ttccacaagctgacgcggtccaatgcaactcacaacctccagcaagccttcaacatcgct
gagcagcacctgggcctcaccaaactcctggaccctgaggatgtaaacacagagaaccca
gacgaaaagtccatcatcacttatgtggtctcctattaccactacttctccaagatgaag
gctcttattgtggagggcaagagggttggcaaggtactagacaactgtattgaggcagag
aagatcatcaaccgctatgaggctctggcatcagacctgctggactggatagaaaagacc
atcgcggtcattagcaaccagaagtttgcaaactcgctgaccggagttcaacagcagctg
caggccttcacaacctactgcaccatagagaagcccatcaagtttcaggagaaggggaat
ctcgaggtccttctgttcaccatccaaagcaagcttagagccaacaaccagaaaccctat
gtgcctcatgatgggaagctcatctcagacatcaacaaggcctgggagaggctggagaag
gcggaacatgagaggggcgtggctctgcgcaaggagctgattcgtcaggagaagttggag
ctgctggctcagtgctttgaccacaaaaccaccatgagacaagcctggctcaatgagaac
cagaggcttgtatcgcaggacaattttggctatgacctaccagctgtcgaggcggcaatg
aagaaacacgaggccatcgaggcagacatagcctcgtatgaagagcgaattggcgtggtg
gtggaacttgctgcagagatggagacagaaggatactacgacattcggcgtatcttggca
cgtaaggagaacattctgggccagtggagtctgctgaaggagctggtggctggaaggagg
acccggctggagaagaacctggccctgcagaagacttttcaggacatggtctacatgatc
gactggatggaggacacacaggtccagcttctgtcgaaggactttgggaagcatcttctg
gaggtggacgacctgctgcagaaacacggcctgcaggaagctgacattgcagtgcaggct
gagagggtcgagacactcaacaccgctgcactcaaattcaccactatagagggttaccaa
ccgtgtgacccacaggtgatctgtaaccgtgtcaaccatgtctcttcctgtctggaggag
ctgaaacaactggcagctaaaaggcgtgatgagcttgaggagtcgagacaactgtgggcc
ttctttcaggagctggaggagtcggaggcctggatcagggagaagagctccatcctggga
gctcagggttatgggaaggacctgagcagtgtgctgaagttactacaaaaacacaagact
ctggcaggagaactgctggctcaccggtcactgctgcagaacaccatgaagcgaggaaag
cagatcctgagtgagaagagctttggcaccgcggggatccaggagagcatcatggaggtg
aagggtgagtggaagaggctggaggaccaggccgcgcagcgtctcggccacctgcaggag
gcgctaaacttttttcagttctccacggagacagacgacctggtagtatggctgcaggac
gcttaccgtctggtctacagcgaagactttggacacgatgagtactccacccagtccctt
ctgaagaaacacagaggggtcagcgaggccatcgacaaacatcgtctgcatgtagtgaca
ctgcgtaaacacatggtgctgctgcctctgcgctaccgtgaacaggaggaggtgcaggtg
cgtatgggagaggtggagcagctctatactgaggtggccgaggtggctgtgctccgacag
cagtggctccacgacgcactcgctgtctaccgcatgttcagcgaggtcaatgcctgtgag
ctgtggattgatgagaaggagcagtggttggacaagatggagatcccagagagactggag
gacgtggagatggtcgcacacaggtttgagagcctggaccaggagatgaacagcctgatg
ggtaggatcctggacgttaaccagatagttcagcagctcctggatggtggtcatccatcc
tctacagaggtcagaggttgtcaggaccacctcaactcaaggtggaacagcattgtggag
ctggttgagcagaagaaagatcagctggattcgatgttacgcctgcagaactacctgctg
gagtgtgccgagatcaagtcccagatccaggacaagagaaaagccatcgacgccactcag
tacatgggcagcgacctgggaggagtcctggctctgcagagacgcctctccaccatggag
ggagccctgtctgtcctggagcccaaacttctgcatctacaggaagaggcggaacatatg
gccaccgcccacccaggtcgggccatggaggttctcgtgccctttgatggcatcagtgtg
gagtgggaggagctgaaacgcaccctgcagggctgtgaggactcgctgatggtggctagc
aggctgcagagcttcatacaggacctggactcgttcctcacctggttggtccagacgcag
acggccgccgcctcagaccagctgcccaacaacttggaagaggcggagaaactcatcaac
aaacatgctgccctaaaggaggagattggacggtatgaagaggactatgagcgcttgcag
gccatgaatgagctgctggagtccgaggaggctcctctccctcaggccgccctgcagcag
tggctccagaagctcgatgttggctggaacaaactgctggagatgtgggagagcaggagg
gaagttctggtccaggctcacattttccatctgtttctgcgagatgtcaaacaggccgag
tccttcctcaacaaccaggagtcggccctcgctcacgtggagctgcccaccacggtggaa
acagtcgaagcctccataaagaaacacaaggacttcaccaccaccatggagctgaacctg
cacaggatcaaagctgtgatcgaggctggagagagtctgatcagccagagtaacatctac
tctgaccgcatcaaggaacgcatcgacaccctcgccaacaggggaaaccagaacagagag
caggcccagcagtggctggaaaaactgaacgaccagtgggaacttcagaggtttcttcag
gactgtcatgagctgggggactgggtgtgtgagaagatgctaatggcgagggacagcagc
cgagacgagacccagaagcttcataagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaataaggaatggttggacaaaattgaaaaggagggccagcagctgatccag
gagaagccggagctcagccaggtggtccggaggaagctggaggagatcagggagtgctgg
caggatctggagagcaccacccaggccaaagcccgccagctctttgaggccaacaaggcc
gacctgctggtgcagagctacgaaagcctggaccagagactgggccagctggagtgtcaa
ctagcctacgtggaccagggacaggacctcaccactgtcaacaagcagctgaaaaaacta
cacaccatggagagccatatggaggagtggtataaggaggtggggcagctccaggcgcag
gtggccaccatcccacagcagacgcagaccaaggagacggttgcagagcgtcaagccatt
gtggaggccaggatggtgcgtctgatcgagccgctgaaggagagacgacgcatcctgctg
gcgtccaaagaagttcaccaagtcggacgagacctggaggatgagatcttgtgggtccag
gagcgcctcccaatggccatgtctcaggagcacggctcctctctgcaggcagtccagcag
ctcatgaagaagaaccagacacttcagagagaactgcagggccacaggagcaggatcgag
gacgtcctggagagggcggggatcatcgcttccatacgcagcccagaggccgactgcgtc
agggcgggccacgaccagctggcccagctgtgggctctgctctgggccgagaccgagagg
aggcagctggtcctggacgccatgtaccaggcgcagcagtactactttgacacagccgag
gtggaggcctggttgagcgagcaagagctgcacatgatgaacgaggagaaggggaaggac
gagccgagcacacttcagctgctaaagaaacacttagtcctagaacagaccatcgaggac
tacgctgagaccatcggcctgctgtcgcagcagtgtcgacagctgctggagatggggcat
ccagactgcgagcagatcagcaagcgtcagtcccagatcgaccgtctgtatgtgtctctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctt
aacagggaggtggacgagctggagcagtggatcgctcagaaggaggtggtcgccagctcg
cccgaactgggtcaagactatgagcatgtcactgtcctgcaggagaagtttacggagttt
gcgtcagagacgggcagcgtggggcaggagcgagtgacggccgtcaaccagatggtggac
gagctcatcgactatggccactcagaggccgccaccatcgctgaatggaaggatggggtg
aacgaggcctgggccgacttgctggagctcatggagactcgggcgcagatgctcgccgcc
tcacaccagctgcacaagttcttctctgactgcagagaggttttggcccagatagaggac
aaacatcgaaggctgccagaagttcaggctcggcagggcagcactgccaacaccagcacc
ctgcagagactcctgcacagcttcgaacaggacatacagctgctggtcacgcaagtgcgt
cagttgcaggagagtgcagctcagctaaggacggtgtacgccggcgagaaggccgaagcc
atcgcatgccgcgagcatgaagtgatgcagttctggaaagagctgctgacgtcctgcgag
gagtgtcgagtacagattaccactgagacagacaagctgaggttcttcagcatggtccga
gatcagatcatgtggatggaatcgatcatctgtcagatagggacaggagagaaacccagg
gacgtgtcctcagtagaggtgctgatgaattatcaccagagtctgaagagtgaagtggag
gctcgcagacggagcaccctggagtgtatcgagacgggcaaaactttgctggctgctaga
aacccagccgctgaagagatcaaggagaggctggacaaggtggttgctaaacaatatgag
atgtctgagaagtgggacaagcactgggaatttctacagcaattgttggaagttcaccag
tttgcccaggaggcggtagtggcggaggcgtggctgaccgctcaggagccgttcatcagc
agcaacgagctgggcggtagtgtagacgaggtggagcagctgattcgtcggcatgaagcc
ttccgcaaagccgccgccacctgggaagagcgattcagctccctgcgtcgactcaccacg
gtggaaaagttgaaagcagagcaaagtaaacaacccccgacccctctgctgggtcgtaaa
gtcttcctggacccccaagatggctcacccaatgcatccaccctgccccgcctcccgatc
tcccccgtcatgagacagaccatctatgagcagaatgaagccaactctcctccctcgccc
tcacctgccacgcctacaccttctccttcatctgtggcttgtcggctggggtcaacagtc
gccaactacacccctgtgatgaacggctccagctaccgccacaccctggaggcgcggcac
ggaggcgtagtgggtgtagctgcaggactaggccagcccgcaccttcctcgatcgcctca
gttgccacggcggccatgctagtctcagccaaccaggcgcgagagagcgccagcacagcg
agggaccaagcgacaaaggtgatgagtcacctccagccagtgcagacggcgaggacactg
gaggtgaaatcctccacgtacctacggcaaccgaaaatcaaacacttggatgatgcggtg
acgccgctgctcgtggccagccggctggagaaagcgagggagagggagagggggagggag
agggagatgatgatgggagaaatagggacagagagagcggaggtggctgtgatggccgag
gtggtgcttcaggagccgagggagcgcctgcacagcgagcccacccgagggtctcggggg
tccaggactgacctgttgggccccactgagccccagggccacacccaccacaggatagaa
cggcagctgtccagcgagcagctgatccaggcacgcagggacgagcttcctcaggaggtg
tggagggaacaggccgagaggcgggagagacgtacgctggaaaggcaaacgtccagcgag
caggagggccacgggagccatgagggccggcggagagagagggaccgacaccggccggac
agacaggaatccagtgagcatgacaccgggaaagagcactcagacagacgctcagcagga
ggagaaaagagatccaccatggcagaaattgtagagcaactgcaagaaagagaagcagca
caggcccgcggtgaggttcctcgagtgcctaacggggtaccagagaagtcttcccgtctc
gaccggcctcgggctcgggacagacccaaaccaaggcgtcgaccacgacccaaagagcca
ggagagactacgcggcggtccaggtccgctccggcccagagcagcccggcagtcccccag
ccgccaacacacaccgcacaccacgagggcttcctcttccgcaagctggacatcgagacc
ctgaaaaagagcaccaatagcaggtcatgggtcaacctgtactgcgtgctgaaaaagggg
gagatgggtttctacaaggacgccaagaacaccgccacatcctacaacaacgagccgctg
ctcaacctctcccactgccactgcgacgtcaccaacggctacaagaagaagaagaacgtc
ttcacgctcaaaacgaaggacggcagtgagtttttgtttcatgcaaaagatgaggacgac
ctcaaagtgtgggtgaccaacatcaccggcagtattacggagcacgaggagattgccaaa
tggggtcagccccaaccaactacctcatccacagacgagggcacgcgccgcgacggcagc
aaagcggacaacaggtcagagcgcggcggcgagcgctcggaccgggccgatcggatcgag
cgggcagataaagaaaaggagaaagagagagaaaaggagaaggagagagagaaggagaag
gagaaggagagagagaggggcgaacggtcggagaggtcagagcggggagggaagtcggac
gcaaagcgctcggaaaagtccgctaagaaaaagtga
DBGET
integrated database retrieval system
