Sander lucioperca (pikeperch): 116053303
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Entry
116053303 CDS
T07345
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116053303 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116053303 (ercc6)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116053303 (ercc6)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116053303 (ercc6)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116053303 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DegQ
Med21
Spt5-NGN
Pneumovirus_M2
Motif
Other DBs
NCBI-GeneID:
116053303
NCBI-ProteinID:
XP_031160211
Ensembl:
ENSSLUG00000021255
LinkDB
All DBs
Position
15:18729517..18747537
Genome browser
AA seq
1455 aa
AA seq
DB search
MPVTLDGSEDQVPSSLSSPASAALTPGGTEEDGATGGSAMCSLPENSQGSEVAAAYPANT
GPGEGNNGGKRSGALLQIDRQRIQAASASSGADELQGLGVAVYDQDVLEQGVLRQVDEAI
QEASQATAKAEAEKEYHSVLDDVRSVTASLKQINKIIEQLSPYAASSKDISRKIESVKRQ
KENKEKQLKKVKAKQKRLQAILGGEDTERVEAELLAEDDEEEEAGPSTLGSMLMPAQETE
WEELIRKGHMTPFGTRIPQKEEKKEPRKVMLVENSAFDLYLADQAKMATERKRVPLLKKK
RSSGLSPGEAKGRNNRIVTSSKDKKMRKRIRKLQITALKAHPKARPKAEPQLPKPKRKHH
TEGEEADSEGSEYLPSDEGIDPDQEEREAIEEGFGEDDEEEYELKPYKKKSEGKGRKKVK
KKEESDEEYCPESSDEEEDVKGKDKKNKDDGDVECYKQRIRRWKRQRLRDREVKRESGEV
LTDDSDEEFDEGFKVPGFLWKKLYKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQVIC
FLAGLSYSKLRTRGSNYRYVGLGPTVIVCPATVMHQWVMEFHTWWPPFRVAVLHETGSFT
SNKEKLIPEIASCHGVLITSYSAVRNMQDTLQRFDWHYVILDEGHKIRNPNAGVTTACKQ
FRTPHRFILSGSPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQV
QTAFKCACVLRDTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQSFLDSKE
VYQILNGDMQVFSGLIALRKICNHPDLFSGGPRILRGIPEDQLTKEEHFGFWKRSGKLIV
VESLLRLWFKQGHRVLLFTQSRQMLNILEVFVTENNYSHFKMDGTTPIASRQPLIARYNE
DKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLL
TAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLSDPDGGQGTETSAIFA
GTGSDVKAPKKPQRPRPSHMVTHGSHIQNHSSANLIEAGAGSRHSATNIPALRDGNTPCS
KNSPGKPNGPTDSQSTNQNGQDVEPNISANAQYTRKNNRDWDTAKPAVRNSDSSSSHQHR
DIDSVLTSPQKHREKRKHCDSADSGKHKHKKRKHSKGSRFEGHRISHLVKKKTFKKAESE
DNETEKKSDDYVLAKLFKKSGIHSVMQHDSIMESSNPDYVLVEAEANRVAKDALKALKVS
RQQCRLSFNRPPPPPASCLRKRFGQKNNSLLVAPSVKSVPTPSKCKDAVIVKRSVSKKPG
SGAHFSGEGAESDSISAPLSSSSLLAKMKARNYLSMPSSQREEAEEEEDGSGAPGTSSPP
PPPTEHDELLVDVRNFIAFQANVDGQASTQEVLEYFKPRLTEKQAPVFRELLRSICDFQR
TSGQEGIWRLKEGFR
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacgttagacggttcagaggaccaagtgccttcctctttatccagccctgcc
agtgctgcccttacaccgggagggacagaggaggatggggcgacagggggctcagcaatg
tgctctttacctgaaaacagtcagggctccgaggttgctgcagcctatcctgccaacact
ggacctggggagggtaacaacggtggtaagaggtctggagctttgctgcagattgaccga
cagcgtattcaagcagcatctgccagttctggagcagatgaactccagggccttggtgtt
gctgtgtatgaccaggacgtccttgagcaaggtgtccttcgtcaagtggacgaggcaatc
caggaggccagtcaggctactgctaaagctgaggctgagaaggaataccactctgtgctc
gatgatgtcaggtccgtcacagcgtctctgaaacaaatcaataagattatcgagcagctg
tctccttatgctgcctccagcaaagatatcagtaggaagattgaatctgtcaaacgacag
aaagaaaataaggagaaacagctgaagaaagtcaaagccaaacagaagcgacttcaggcc
attttgggaggagaggacaccgaaagggtggaagctgagcttttggcagaggatgatgaa
gaggaagaagctgggccgtccacactgggcagcatgctgatgcctgctcaggagaccgag
tgggaggagcttatccggaagggtcacatgactccttttggaacacgaatcccgcagaag
gaggaaaaaaaggagcctcgaaaagtgatgcttgtcgagaactcggcctttgacctatac
ttggcggaccaggccaagatggctactgagaggaagagagtccctcttctaaagaagaag
aggagctccggactcagccctggtgaggccaagggaagaaacaacagaattgttacctct
tccaaggacaaaaaaatgaggaagcgcatacgaaagctccagataacggctttgaaagcc
catcctaaggctcggcctaaggccgagccacagctccctaaaccaaagaggaagcatcac
actgagggagaggaagcagacagtgaggggtcagaatacctgcctagtgatgaaggcata
gaccctgaccaagaggaaagagaagccattgaggagggctttggggaggatgatgaagaa
gagtatgagttgaaaccgtacaagaaaaaaagtgaaggaaaagggaggaagaaagtaaag
aaaaaagaggagagtgatgaagaatactgccctgagagttcagatgaagaggaggatgtg
aagggtaaagacaaaaaaaacaaagatgatggagatgtggagtgctacaaacagagaata
aggagatggaagcgacaacgtcttcgagacagggaagtaaagagagaaagcggcgaggtg
ctaacagatgacagtgatgaagaatttgacgaaggcttcaaagtacctggtttcttgtgg
aaaaaactttataagtatcagcagactggtgtgcggtggatgtgggaactccactgtcag
caggcaggaggcatcctgggagacgagatgggattgggtaaaaccatccaggtcatctgc
tttctggctggactgagctacagcaaactgaggaccagaggatcgaactacaggtatgtt
ggtttgggtccgacggtcatcgtgtgcccagctacagtcatgcaccagtgggtaatggag
tttcacacctggtggcctcctttccgagtggctgttctacatgaaactggctcgttcacg
agcaacaaggagaagcttattccagagatagcatcatgtcatggtgtcctgataacctca
tattcagctgtgaggaatatgcaagacaccttgcagcgcttcgattggcactacgttatc
ctggatgagggccataagatcaggaatccaaatgccggagttaccactgcctgcaaacag
tttcgcactccccacaggttcatcctgtcagggtctcccatgcagaacaatttgaaggag
ttgtggtctctgtttgacttcgtcttccccggcaaactggggacattgcctgtcttcatg
gagcagttctctgtgccgatcaccatgggaggatacagcaatgcctcacccgtacaggtc
cagacggcatttaagtgtgcatgtgtgctgagggacaccataaatccttacctgctcaga
agaatgaaggcagacgttaaggccaacctctccttacctgacaaaaatgaacaggttctg
ttttgcagattaacagaggaccagcggcaggtgtatcagagtttcttagattccaaagag
gtctaccagatacttaacggggacatgcaggtattctcaggtttaatagcattacgtaag
atctgtaaccacccggaccttttctcgggcggcccccggatcttgaggggaatccctgaa
gaccagctaactaaggaggaacactttggcttttggaaacgctcaggcaagctgatagtg
gttgagtcactgctgcgactctggttcaagcagggccacagagtcctgctcttcactcag
tcgcgacagatgttgaacatcttggaggtatttgtgacagagaataactactcacacttt
aaaatggacggtactaccccgatagcttcccgacagcccctcatcgctcgctacaatgag
gacaaatccatttttatctttttgttgaccactaaagtcggaggtctgggagtcaatctg
actggagccaacagagtcatcatctatgacccagactggaaccccagtactgacacacag
gcacgggagcgagcatggaggattggtcagaagcagcaggtgacggtctacagactgctg
actgcagggaccatcgaggagaaaatctaccacaggcaaatcttcaaacagtttctgacc
aaccgcgttctgaaggaccccaaacaaaggcgcttcttcaagtctaacgacatctatgag
ctcttcactctgtctgaccctgatggaggtcaaggaacagagaccagtgccatatttgca
ggtactggttctgatgtcaaggcacccaagaagcctcagaggccaaggccatcacacatg
gtaacccatggcagtcatatacagaaccactcctcagcaaacctgattgaagctggtgca
ggcagcagacactccgctacaaacattcctgcattaagagatggaaacactccgtgcagt
aaaaactctccgggtaaaccaaacggtccgacagacagtcaaagcaccaaccaaaatggc
caggatgtagagccaaatatttcagcaaatgcacagtatacaagaaaaaataacagagac
tgggacacagccaagccagcagttagaaactcggactcatccagctctcaccaacacaga
gacatagactctgtcctgactagcccacagaaacacagggaaaagaggaagcactgcgac
tcagctgactcgggcaaacacaaacataagaagcgtaaacactccaagggttctcggttt
gaaggccaccgcatctctcacttggtgaagaaaaagacttttaagaaagcggagagtgaa
gacaatgagacagagaagaaatcagacgattatgtcttggcaaagctcttcaagaaatct
ggtatccacagtgtgatgcagcatgacagcatcatggagtcctccaaccctgactatgtt
cttgtggaagcagaagccaacagggtggccaaagatgccctgaaagcgcttaaggtttct
cgccagcagtgcaggctgtccttcaacagaccccctcctccacctgcaagctgtctcagg
aaacggtttggacaaaagaataattctctcctggttgcaccttctgttaaatctgtcccc
actccgagcaaatgcaaggatgctgttattgtgaagaggtctgtgtcaaagaagcctggt
tcaggagctcatttcagtggggagggtgcagaaagtgactcaatctccgccccactctcc
tcctcctccctgctggccaagatgaaagcccggaattacctgagcatgccctccagccaa
agagaagaagcagaagaagaggaggacggctccggagctccaggaacgagctccccccca
cctccgcccactgagcatgacgagctgttggtggatgtgcgcaactttatagccttccag
gcaaatgtggacggacaggcctccacccaggaagtgctggagtacttcaaaccaagattg
actgagaaacaggcgcctgtcttcagagagctgctcaggagcatctgtgacttccagagg
acttctggtcaggagggcatatggagactgaaggagggcttccgctga
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integrated database retrieval system
