Sander lucioperca (pikeperch): 116053757
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Entry
116053757 CDS
T07345
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sluc03037
]
116053757 (nphp3)
Cilium and associated proteins [BR:
sluc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116053757 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_14
AAA_16
TPR_11
NACHT
TPR_19
TPR_6
AAA_22
KAP_NTPase
ATPase_2
AAA
T2SSE
AAA_14
AAA_19
Viral_helicase1
Macoilin
Motif
Other DBs
NCBI-GeneID:
116053757
NCBI-ProteinID:
XP_031160773
Ensembl:
ENSSLUG00000019530
LinkDB
All DBs
Position
23:complement(1872379..1883590)
Genome browser
AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKESKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDLNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETKAELDVFIKKHSP
VLRRMCEGLGHFYLNVCFPEENAASYAVERKQEIERSSVCVLLVKSAVTSSVVEDCEEAF
VKNPDGHPLVLYLRTEEDHNLTGPTRQLLERVNAADKAAKVKVVDHSGSAEEGAELIYSQ
LEKVIKQELLAFEGADVDSKDSGIEEGREEDSGDVLWDLHDEQEQIESYQQARSSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQLQKQSPNTLFLYHFVGRP
LSTSSEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIIDS
IDQIQQAERHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSVVNAE
CQSMDLKLTKDQEKKLERHCRSASTCNALYVTLLARMMISSIAGWSLEKSLEQCLQCQDT
MSLYRLALKMTLNSLNTDREQHIMREILCLVCASHNGVSESEVLDLFPELELPVLSSLLY
HLNRLCIVTLRCGLIRFQHLQAWEAVRLEFLGGGSSSASYREKLIQYFSQQLSQDRVTWR
VADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFD
SLKHYEKSCESEDTMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKYE
QAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLYY
LQNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYETSEDMYERALDI
RKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVIYCQLKKHSEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAELY
KRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAPLPHASR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagcccaggagaggtaattgaggatggatatggaggt
gaaggaggggaagcctgtgagatcccagttgaggtcaagcccaaagcccgactcctgcgc
agttcctttcgcagaggacctcgggtgattggggccagttttaaatccacaggttctgtg
gatctagagtatgctgccgagtatgaaagactccgtaaagagtatgaaatttttcgcgtc
agtaaaaataatgagatctcatccatgcaaaagaaggagtccaagctggatgaagagaac
aagaggctgagggctgagctacaggctctgcagaagacctaccagaagatccttagagaa
aaagagagtgctcttgaggcaaagtatcaagctatggagagggctgccacctttgaacat
gacagggacaaagtaaaacgacagtttaagattttccgggagacaaaagaaaaggagatt
caggatctcctgcgcgccaagagggacttggaggccaaactgcaacagttgcaagctcag
ggcattcaggtctatgacctaaatgattctgactcagatgacaaccaaaccacggttact
gctgcagggacacagtgtgagtactggtctggtggtgtgctgggaagtgagccctctatg
ggtagcatgatgcagttgcaacagacgttccggggaccggagtttgcccacagtttgata
gatgtggagggaccctttgcaaatgtgagcagagatgattgggatgctgctgtggccagt
ctgcttcaggtctccccccatgtaccccaggccttatggagtaacacagtgcgctgctac
ctaatctttacacaggagaccaaagctgagcttgatgtctttattaagaaacactctcct
gtgttacggagaatgtgtgagggtctaggccatttctacctgaatgtctgcttcccagag
gagaatgctgcctcttacgctgttgagcgcaagcaggagattgaaaggagctctgtgtgt
gtgcttcttgtcaaatctgctgtcaccagctctgtggtggaggattgtgaggaggctttt
gtgaagaatccagatggccatccactagtgctctacctcaggactgaagaagatcacaat
ttgactggacccaccaggcaactgctagaaagggtcaatgctgcagacaaggctgctaaa
gtcaaggtggtggatcatagtggttctgcagaggagggggctgaactgatttattctcaa
cttgagaaagtcatcaaacaggagttgctggcttttgaaggagcagatgttgactctaag
gactctgggatagaggagggacgtgaggaagactcaggagatgtgctgtgggacctgcat
gacgagcaggaacagattgagtcttaccagcaggcccgtagcagcaccacctcccagtta
ggcttccagaagtatatagatcgtttgaatgacatgatagctgctccccctcccacccct
cctctgctggtgtctggtggtccaggctcaggaaagtctctcctgctctccaaatggatc
gagcagctgcagaagcagtcccccaacaccttgttcctttatcattttgttggtcgccca
ctttccacaagctcagaaccagttctcattatcaaacgcctcacagtcaaactgctgcag
cacttctggtctatttctggcttgtccatggagcccagtaagatcttagaagagtttcct
cgctggcttgaaagactatcagcacgccatcaaggaaatatcatcatcatcattgactcc
attgaccaaatacagcaagcagaaagacacatgaagtggctgattgaccctctccctgtc
aatgtcagagtggtggtgtctgtcaatgtagagacatgtcctcaagcttggaggttatgg
cccacactccatttagacccactgagtcccagagaggtcaggagcgttgttaatgcagag
tgccagagcatggatctcaaacttaccaaggaccaggagaagaagctggaaaggcattgt
cgctctgcatcgacctgcaatgcattgtatgtcacactactggcaagaatgatgatcagc
agtatagcaggttggtcactggagaagagcctggagcagtgtctacagtgccaggacacc
atgtcactctaccgcctggcactgaagatgacgctgaactctcttaacacagacagagag
caacacattatgagagagatactgtgccttgtatgtgccagccataatggagttagtgaa
tcagaggtactagaccttttcccagaactggagttgcctgtcctgtcctctctgctttac
catctgaacagactctgcattgtaaccctccgctgtgggctcatcaggtttcaacacctg
caggcttgggaagctgtgaggttggagttcctgggtggaggaagtagctcggcttcttac
agagagaaactcatacaatactttagtcagcaactcagccaggatcgtgtgacgtggcgt
gtcgcagatgaactgccatggctgctccaacagcaggaggataggactaaactacagctt
agcctcctgaacctgtttgtctcccaaaacctctacaagaggggtcatttctctgagctg
ctagcctattggcaatatgtgggcaaagacaaaagctccatggccactgagtactttgac
tccctaaaacactatgagaagagctgtgagagtgaagacaccatgaccaagctggcaaac
ctgtatgagaccttgggacgtttcctcaaagacctgggcctccctagtcaggctgtagcg
cctttacagaggtcccttgagattagggagacagccttggacccggaccatcccagcgtt
gctcgctctctgcaccagctggccggggtttatgttcagtggaagaagtatggcaacgct
gagcagctgtacaagcaggccctggagataagtgagaatgcatacggagctgagcatgcc
agcgtagcacgagagctggagtcactcgccatgctctatcagaaacaaaacaaatatgaa
caagcagagaaactcaggaagaggtcagtgaagatccgtcagaagactgctcgccagaaa
ggtcatatgtatggcttcactttgttgaggcgcagagccctacagctggaagagctgacc
ctgggaaaagactctgcagactctgccaagacacttaatgaactgggtgtcttgtactac
ctccaaaacaacctggatgcagccaagatgttcttgacccgctctctggagatgcgtcag
cgtgtcctcggtccagatcacccagactgtgctcagtcgctcaacaacctggctgcactg
catacagagaggagggagtatgagacgtctgaagacatgtatgagagggcgctagatatt
cgcaagagggccttgtccccagaccacccctcgctggcatacacactcaaacacctggcc
atgctctataaacgcagaggaaagctggaaaaggctgtgccactttatgagctgtctctg
gaaatcagggaaaaaagttttgggcccaaacaccccagtgtggccacagcactggtcaac
ctggctgtaatctactgccaactaaagaagcacagtgaagccttgcctctttatgaacga
gcactgaaagtgtatgaggatagtttggggcgctcacacccacgggtcggggagactcta
aaaaacttggctgtgctaagctatgaagagggtgacttcgagaaggcagcagagctttac
aaacgtgcaatggagataaaggaggcagagccatcgttggtgtgtgggaacgccccgtcc
cgccactcctccagtggggacacatttagtctgaggggacctgctcccctcccacatgcc
tcgaggtga
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