Sander lucioperca (pikeperch): 116053877
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Entry
116053877 CDS
T07345
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116053877 (hps1)
Membrane trafficking [BR:
sluc04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
116053877 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
116053877
NCBI-ProteinID:
XP_031160949
Ensembl:
ENSSLUG00000021216
LinkDB
All DBs
Position
15:complement(19475480..19489748)
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AA seq
681 aa
AA seq
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MKCLLIASESAEVLFQWTDPEFQQNVQEQYGASQEEGHGLPAFEDSISTLFAPIIISCST
MVDRLCDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEGDLRRKIYVMKKMIEVMFG
MVTLSSNLLRRELRPQDTEQRARLWKHLQSLLETYSQLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNGSVERAGEEVLHAFILIHTKLLAFYSSRNASSLSTSDLLTLIIMA
QNMYPSNIDLDDPHPEDVESTSGSGPDSFYTPQPSPTDRDSSSSADKPVRGSTPVFEFVD
PDVQMAEDSLQALEVPPPAPSTPRRVFLEVSLKDGLYPMMPHSMYCLPLWPGISLVMLTK
IPTSAVAMSVYMFLEAFAKLEKRLSEGQEGSAASRGQPTIHDVRSKLDKFIKALGPSEIQ
SAQLQNVWTEFKNRAFSRGGPGFNRDLIPWCKNMKTQLCGIYRQCFLIESGKADIPQRLS
PSLQERAQTMMQEKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSL
NITERNTSELGKGPVAQFIKSKVWSLVSTTRRYLQKGYSTVTLRDGDFYFCYFLWFENET
GYKLEAGDIPILPDDSAPIGMLAWDYYRKLLRYYSKNHQGEVVKCYELLTVHLGVIPTEI
ILQHCRQLASKLWEPSRNPLL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttgctgatagccagtgagagcgctgaggtcctcttccagtggactgaccca
gaatttcagcagaatgtccaggagcagtatggggcgtcccaagaggagggccacgggctt
ccagccttcgaggacagcatcagcactctgtttgctcccatcattatctcctgcagcacc
atggtggacaggctgtgtgacagctacacctccttcaccacagaaaacaaccatatctac
gtcctacaccagttcgatgagtgtctctacattgctgtgaatggagacggggaggaggga
gagggtgatctgaggaggaagatctatgtgatgaaaaagatgattgaggtcatgtttggt
atggtcaccctcagcagtaacctcctcaggagagaactgcgtcctcaggacacggagcaa
agggcgaggctgtggaagcatctccagagcctgctcgagacctacagccagctccgagag
aatgaccagagcttcttagtggaggcagtggagaggctgatccaccccacgctgtgtgag
cagtgcatcgagttcctagagcgccgtttagttcagcagctcaatggcagtgtagagaga
gcaggagaggaggtgctgcatgccttcatcctgattcacaccaaactgcttgccttctac
tccagccgcaatgcaagctcgctctccacctcagacctcctgactctcatcatcatggca
cagaatatgtatcctagcaacatagacctggatgatccacatcctgaggatgttgagagt
acatccggttctggtcctgacagtttttacacgccacagccctcccctacagacagggac
tcaagcagttcagcagacaagccagtgagaggaagtactcctgtgtttgagtttgtggat
ccagatgtccagatggcagaggacagcttgcaggctctggaagttcccccacctgcccct
tcaacccctcgcagagtcttcttagaggtctcactcaaagatgggctgtatcccatgatg
cctcactccatgtactgtctgccactgtggccgggcattagccttgtgatgctaactaag
attcccaccagtgcagtggccatgtcagtgtatatgtttttggaagcctttgccaagctg
gaaaagcgtttaagtgaaggccaagaaggttctgctgcttctagaggccagccaactata
catgacgtacggagcaaactagataaattcattaaagccctggggcctagtgagatacag
tctgcacagttacaaaacgtctggacagaattcaagaacagagccttttccagaggaggg
cctgggttcaacagagatcttatcccatggtgtaagaatatgaagacccagctgtgtgga
atataccgacaatgttttctcattgaatctggaaaagccgacattcctcaacgtctctct
cccagtctgcaggaacgagcccagaccatgatgcaagagaaactgatggactggaaggac
ttcctgttggtgaagagcaagaggaatatcaccatggtgtcttacctggaggatttccca
ggcctcatccattttatctgcgtggatcgatccactggccaaatgattgcgccgtcgctc
aacatcactgaacgcaacacgtctgagctggggaagggaccagtggctcagttcatcaaa
agcaaggtgtggagcctggtcagcacaacacggcgctatctccagaagggttactccact
gtcacattgcgcgacggagacttctacttctgctacttcctctggtttgaaaatgaaaca
ggctacaagttagaggcaggggacatacccatcctacctgatgactctgcccccattggg
atgcttgcctgggactactacaggaagctgctgcggtactacagcaagaatcaccagggt
gaagtggtgaagtgttacgagctgcttacagttcacctgggggtcatccccactgagatc
atcctccagcactgcagacagctggcaagcaaactgtgggagccgtcgcgcaacccactg
ctgtag
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