Sander lucioperca (pikeperch): 116053961
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Entry
116053961 CDS
T07345
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116053961 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116053961 (smarca2)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116053961 (smarca2)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116053961 (smarca2)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
116053961 (smarca2)
Chromatin remodeling factors
BAF complex
116053961 (smarca2)
PBAF complex
116053961 (smarca2)
GBAF(ncBAF) complex
116053961 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
116053961
NCBI-ProteinID:
XP_031161055
Ensembl:
ENSSLUG00000020089
LinkDB
All DBs
Position
2:complement(30193695..30257670)
Genome browser
AA seq
1582 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSEYSQDSMYPMHKTMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYISPHPSPMGVHEHASSPMSGGGRGPTPPHMPPSQSGPMMPMDPQSAVPNMSNMSQQG
RGPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQQQQPQQQTP
IASPYNRPPGMPMAPLGGPQSSPCPTPTMQGHNQSTGPKPWSDGQGGENQANAQKHLTPV
PSGRPSPAPPQVSAVPAGAMPGSSVTPQPPGQQVSPMLQMQKQNRITPIQKPQGLDPVGI
LQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRR
DTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKDF
KEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKK
DKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKKKKKKKKMADGDGEGPSAIGPDGEP
MDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFE
EEEEEEGTKAETEDKKIIDPNGVEMFVVATKHIIESAKQDVDDEYSVPTGQTSSQSYYGV
AHAVIERVEKQSSLLINGSLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALIT
YLMEHKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPVLRRGLVPQLRSGKFN
VLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPL
QNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRP
FLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQRGILLTDGSEKDKKGKGGAKTL
MNTIMQLKKICNHPYMFQHIEESFAEHLGFQNGVISGLDLYRASGKFELLDRILPKLQAT
NHRVLLFCQMTTLMTILEDYFGYRNFQYLRLDGTTKSEDRAALLKKFNEEGSQYFIFLLS
TRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKIL
AAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILETEEQNEEEDEIPDDETLNQMIAR
NEDEFELFMRMDMDRRREEARNPKRKPRLMEEDELPSWIIRDEAEIERLTYEEEEEKMFG
RGSRCRRDVDYSDTLTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRDDGGSK
AKKKRGRPPAEKHSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKELPEYYE
LIRKPVDFKKIKDRVRNHKYRSVVDLERDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKS
ARQKIAKDEESEDDSDEDDDDEDESEAEAKSVRVKIKLSKEPRSTDKGKKRQSRGKAKPV
VSDDDSDEDLDDNDQSDKSDDD
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacgtcaggtggtatgtcccatcctggcccttctccaggggca
ggtctatccccagggcccatcttgggccctagccctggaccggacccctcaccaggctct
gttcacagtatgatgggacccagtcctggacctggaacacccaacgcacctcatggcatg
cagggtcagggacaaagtgaatactctcaggacagcatgtatcccatgcacaagaccatg
gagggtatgaatgagaagaccatggcagatgcgatgcactttggtcacatgaaaggtgtt
gggatgagatctctgcatagtggtatggggcctccacagagtccgatggaccagcacagc
caaggatacatatccccccatccatcccccatgggtgtccacgagcatgcttctagtccc
atgtcaggaggtggtaggggacccacaccgccccacatgcctccctcccagtcaggccct
atgatgccgatggatccccagtcagccgtgcccaacatgtccaacatgagccagcaaggc
cggggaccttctgctttcagtccggtccagctgcagcagctcagagctcaaatcctggcc
tacaagatcctaggccgtgggcaacccctgcctgaaaacctccaactggctgttcagggc
aagaggagtctacccacaatgcaacagcagcaacaacagcagccgcagcagcagacaccg
attgctagtccttacaacaggcctccaggtatgccaatggcacctttgggtggtccccag
tcaagtccctgccctaccccaaccatgcaaggacacaatcaaagcacaggacccaagcct
tggtctgatggtcagggtggtgaaaatcaagccaatgcccagaagcacctcacccctgtt
cccagtggacgcccgtcccctgcaccacctcaggtctcggctgtgccagctggggccatg
ccaggcagttcagtgacccctcagccccccgggcagcaggtgtcccccatgcttcagatg
cagaaacagaaccgcattacaccaatccagaagccccagggcctggacccagtggggatc
ctgcaagagcgagagtacaggttgcaggctcggattgcacatcgaatccaggaactggaa
agtttgccaggctctctgccccccgacctgaggactaaagccacagttgagctcaaggca
ctgcgtcttcttaacttccagcggcagctgagacaggacgtggtggcatgtatgaggcga
gacacaaccctggagacggccctcaactccaaggcttacagacgcagcaagcggcagacg
ctgagggaggcacgcatgaccgagaagctggagaaacagcagaagctcgagcaggaaaag
aagcgcagacagaaacatcaggaatatctcaacagtattcttcagcatgcaaaggacttt
aaagaatatcaccgctcagtgtccggtaaaatgcagaaactcacccgagctatcgccacc
tggcacaccaacacagagcgggaacagaagaaggagactgagagaatcgagaaggagagg
atgaggagactcatggccgaagatgaggaaggctaccgaaaactaattgaccaaaagaag
gacaagcgtttggcctacttgctgcagcagacggatgaatacgtggccaacctcacaacc
ctggtgtacgaacacaaagctgcccaagctgccaaggagaagaagaagaagaagaagaaa
aagaagatggcggatggagatggcgaaggccccagtgccattggacctgatggagagccc
atggatgagagcagccaaatgagtgagctgccagtcaaagtgattcagacggagactggg
aaagttctgcagggaacggatgctcccaaatccagccagctggaggcctggctcgagatg
aaccctgggtatgaagtcgctccgcggtcggacagcgaggagagcggctccgagtttgag
gaggaggaggaagaggaggggaccaaggcagagacggaggacaagaagatcatcgatccc
aatggagttgaaatgtttgtggtggctaccaagcacattatcgaatcagccaagcaggat
gtggatgatgagtacagtgttcctactggacaaaccagctcccagtcttactatggtgtg
gcccatgctgtcattgagagggtggagaagcagtcgtcgctgctgatcaacggctcactc
aaacattaccaggtccaggggctggagtggatggtgtccctctacaacaacaatctaaac
ggcatcctggcagatgaaatgggtctcggcaaaaccatccaaaccatcgctcttatcacc
tacctgatggagcataagaggatcaacggcccctttctcattattgttcctctctcgact
ttgtctaactgggtctatgaacttgacaagtgggcaccctctgtggtcaaaattgcttac
aagggcacccctgtgttgcgccgtgggcttgttcctcaactccgcagcgggaagttcaac
gtcttgctgaccacctatgaatacatcattaaggacaagcacatactggccaagattcgt
tggaagtacatgattgtggacgagggtcaccgcatgaagaaccaccactgtaagctgacc
caggtgttgaacacccactatgtggctccccgccgcctcctcctcaccggtacacctctg
cagaacaagctgcccgagctgtgggccctgctcaacttcctcctgcccaccatctttaag
agctgcagcaccttcgagcaatggttcaacgccccgttcgccatgacaggagagagggtc
gacctgaatgaggaggagaccatcctgataatccggcgtttgcataaagtgctccgcccc
ttcctgctacgcagactgaagaaggaggtggagtctcagctgccagagaaggtggagtat
gtcgtaaagtgtgacatgtctgccatacagaaggttttgtaccgccacatgcagagaggc
atccttcttactgacggctcagagaaagacaaaaagggcaaaggaggagcaaaaaccctg
atgaacactatcatgcagctgaagaagatctgcaaccatccatacatgttccagcacatt
gaggaatcttttgctgagcacttgggctttcaaaatggtgtcatcagtgggcttgatctg
tatcgagcttctgggaagtttgagctcctagatcgcatcctgccaaagctgcaggccacc
aaccacagagtcctgctgttctgccaaatgaccactctcatgacaatcttggaggactac
tttggctaccgaaactttcagtatttacgtcttgacggaaccaccaagtctgaggaccga
gcggccctgctgaagaaattcaatgaggaaggatctcagtacttcatcttcctgctcagc
accagagccggtggcctcggcctcaacctgcaggctgccgacactgtcgtcatctttgac
agtgactggaacccacaccaggaccttcaggcgcaggaccgggctcaccgcatcggtcag
cagaatgaggtgcgtgtgcttcgtctctgcaccgtcaacagtgtggaggagaaaatcttg
gcagctgccaaatacaaactcaacgtggatcagaaggtcatccaggcgggcatgttcgac
cagaagtcctcgagccatgagcgccgtgccttcctccaggccattttagagactgaggag
cagaatgaggaagaagatgagatacccgatgatgaaaccctcaaccagatgatagcccgc
aatgaagacgaatttgagcttttcatgcgcatggacatggaccgacgccgggaggaagcc
aggaacccaaagcgcaagcctcgtctcatggaggaggacgagttgccttcttggatcatc
agagacgaggctgagatcgaacggctcacgtatgaagaggaggaggagaagatgttcggc
cgagggtcacgctgtcgtcgggatgtggactacagcgacacgctgactgaaaaacagtgg
ctacgggccattgaggatggaaacctggaagagatggaggaagagatccggctgaaaaag
cgcaaacgcaaaagacgccaggacaaagactcgtcaagcagagacgacgggggctcaaag
gccaagaagaaacgtgggcgtccaccagctgagaaacactcccccaaccccccaaaactc
accaagcaaatgaacaccatcatcgacacggtcatcaactacagagatgggtcaggaaga
caactaagtgaggtcttcgtccagttaccatctaggaaggagctcccagaatattacgag
ctgatcagaaaacctgtggacttcaaaaagatcaaagatcgcgtgagaaaccataaatac
aggagtgtggtagacctggagagggacgtgatgctgctttgtcacaacgcccagaccttc
aacctggagggatcccagatatacgaggactccattgtccttcagtctgtgtttaagagt
gccaggcagaagattgccaaggatgaagagagtgaagatgacagcgatgaggatgatgat
gacgaggatgagtcagaggctgaggccaagtctgtgcgggttaagattaagctgagtaag
gagccgcgcagcaccgacaaaggcaaaaagagacaaagccgagggaaggccaagccggtc
gtcagcgacgacgacagcgacgaagacctggatgacaatgatcagtcggacaagagcgat
gacgactga
DBGET
integrated database retrieval system
