Sander lucioperca (pikeperch): 116054071
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Entry
116054071 CDS
T07345
Symbol
snx2
Name
(RefSeq) sorting nexin-2 isoform X2
KO
K17917
sorting nexin-1/2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116054071 (snx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116054071 (snx2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116054071 (snx2)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Macropinocytosis
Sorting nexins
116054071 (snx2)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116054071 (snx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
Sorting_nexin
DUF3557
HR1
FAM92
Motif
Other DBs
NCBI-GeneID:
116054071
NCBI-ProteinID:
XP_031161250
Ensembl:
ENSSLUG00000012441
LinkDB
All DBs
Position
2:37279801..37317947
Genome browser
AA seq
508 aa
AA seq
DB search
MADTARDPPPQHTDFHELEDGEDLFPEPTATLESEPASLPAEDISTNSNGPKQDSLFDDD
PEDLFAEATEEVSLDSPERDVLLSDGPSPAITPITPPTSVLTPRIGLHDDMFTHSSFDEI
EEEEGGDSFDIHISVSDPEKVGDGMNAYMAYKVTTKTSISLFKSHEFSVKRRFSDFLGLH
SKLASKYLHIGYIVPPAPEKSIVGMTKVKVGKEDQSSNEFVEKRRSALERYLMRTVKLPV
LLKDPDVLQFLESSELPRAVSTQALSSAGLLRMVNKAAEAVNKMTIKMNESDAWFEEKQQ
HFENLDVQLRKLHASMESLVLHRKELSVNTAQFAKSAAMLGNSEDHTALSRALSQLAEVE
EKIDQLHQDQANADFYLFSELLGDYVRLITAVKGVFDHRMKTWQKWQDTQMLLQKKREAE
AKLQFNNKPDKLQQAKDEIKELEGKVEQGEREFEQISKTIRKEVSRFEKERVKDFKTIII
KYLESLVQTQQQLIKYWDAFLPEAKAIS
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggacacagccagggaccctccaccgcagcacaccgacttccatgagcttgaggac
ggggaggacctgttcccggagccgactgccacactagagtcagaaccagccagtctacct
gctgaggacataagcaccaactcaaacggaccaaaacaggattcactgttcgatgatgat
ccagaggacctgtttgcagaggccacagaggaggtttcgttggacagtccagagagagac
gtcctgctgtctgacggcccgtcgcccgccatcacccccatcacccctcccacctccgtc
ctcacccctcgcatcggccttcacgacgacatgttcacacactcctccttcgacgagatt
gaagaggaggagggcggcgattcattcgacattcacatatcagtgtctgaccctgagaaa
gtgggtgatgggatgaatgcgtacatggcctacaaagttacgaccaagacctccatttct
ctgtttaagagtcatgaattttcagtaaaaaggcgtttcagtgattttctgggtctgcac
agtaaactggcctccaagtatctgcacataggctacatcgtcccccctgcgccggaaaaa
agcattgtggggatgaccaaggtgaaggtggggaaggaggaccagtcgtccaacgagttt
gtggagaagaggaggtcggcacttgagaggtatttgatgagaacagtgaagctccccgtc
ctgctgaaggatcctgacgtcctgcagtttctggagagctcagagttaccgcgggcggtc
agcactcaggctctgagcagcgccggacttctccggatggtcaacaaggccgctgaagcc
gtcaacaagatgaccatcaagatgaacgagtcagacgcttggtttgaggagaagcagcag
cattttgagaatctggatgttcagctgaggaaacttcatgccagcatggagtccctggtc
cttcacaggaaagagctgtcggtgaacacggcgcagttcgccaagtcggcggccatgttg
gggaacagcgaggaccacacggctctgtcccgagctctgtcccagctggccgaggtggag
gagaagatcgaccagctgcaccaggaccaggccaacgcagacttctacctcttctccgag
ttactgggcgactacgtccgcctcatcaccgccgtcaagggtgtgtttgaccaccgtatg
aagacgtggcaaaagtggcaggacactcagatgctcctgcagaagaaacgagaagctgaa
gccaaactgcagttcaacaacaaaccagacaaactgcagcaggccaaagacgagatcaaa
gagctggaggggaaggtcgagcagggagagagagaatttgaacaaatctcaaaaactata
cgcaaagaagtcagcaggtttgagaaagagagagtgaaggactttaaaacgatcattatc
aaatacctggagtcactggttcaaacacaacagcagctgataaaatactgggatgccttc
ttacccgaggccaaggccatctcatag
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