Sander lucioperca (pikeperch): 116054114
Help
Entry
116054114 CDS
T07345
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sluc02000
]
116054114 (tmc1)
03037 Cilium and associated proteins [BR:
sluc03037
]
116054114 (tmc1)
Transporters [BR:
sluc02000
]
Other transporters
Pores ion channels [TC:
1
]
116054114 (tmc1)
Cilium and associated proteins [BR:
sluc03037
]
Other cilia and associated proteins
Stereociliary proteins
116054114 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
116054114
NCBI-ProteinID:
XP_035864280
Ensembl:
ENSSLUG00000011651
LinkDB
All DBs
Position
2:33800836..33831675
Genome browser
AA seq
889 aa
AA seq
DB search
MKKGRRDPEAKGGEREEEEEQPEMKRCKTAKRRKNIKNENARKMEEEEEEAEVRNAKRKK
KHAKREKGEREEREEDGGKRRVKEKAREGRRRTHTRVETSSEPETSEEDELEEESEESEV
RPESLSPEELEMLKEAVYERKKLVQGLRGKPWPMKEKLVTLRESQEFVEKYEGALGKGKG
RKIYAYKVMMSKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGIN
MILFCLTFGLVMVPEALMGRPYGTIPRKTVPRAEAASAMDFAVLWDFGGYAQYSVLFYGY
YNNQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGVGDDNSFNFSWKMFT
SWDYLIGNPETADNKFASITTSFKEAILEEQESCKDDNIHLTRFLRVLANFLVLCCLAGS
GYLIYFVVRRSQKFALEGLETHTWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRVAL
QWQLGRIFALFLGNLYTFIIALMDEINLKREEEKIIKFNITMWEASLYNATGSENSTALP
VTFHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLE
AGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVP
QERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKKRMFDVIQETLE
SDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYKEANVDLKKKLQTQNEENK
RKNKLAALKAQTDLEEARAATQTAEQKNNNASLQHQHAEEEEDLGSSQRKNGRPPPSVRH
QDGRPPATRAPAPRTLHPDTHRSLGYLPGGGFPQQREPRMHRVPSLQRH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaaggagggatccagaagcaaaaggaggagagagggaagaagaggaggag
cagcccgaaatgaaaagatgtaagacggcaaaaagaaggaagaatatcaaaaatgaaaat
gcgagaaaaatggaggaggaagaggaggaagctgaggtcagaaatgccaagaggaaaaag
aaacatgccaaaagagagaaaggagagagagaagagagagaagaggacggaggtaaacgg
agagtgaaggagaaagctcgagaagggaggaggagaacgcacacgagagtagaaacaagt
tccgagccggagacgagtgaggaagacgagttggaagaggagagcgaggagagcgaggtg
cggccggagagtctgtctccggaggagctggagatgctgaaggaagccgtgtacgagagg
aagaagctggtccagggcctgagggggaaaccctggcccatgaaggagaaactcgtcacg
ttacgggagtctcaggagtttgtggagaaatatgagggagctttggggaaagggaaaggc
aggaagatctacgcctacaaagtcatgatgtccaagaaatggatgaagtttcaacgggac
tttgaaaacttcaaaactgcctgcatcccatgggagatgaaaatcaaggagattgaaagt
cattttggctcctcggttgcttcttactttatcttcctgaggtggatgtacggcatcaac
atgatcttattttgtctgacgtttggcctcgttatggtcccagaggcgttaatggggcgg
ccctacggcaccatcccaagaaagaccgtccccagggctgaggcggccagtgccatggac
tttgctgtcttgtgggactttggaggttatgctcagtattcagtcctcttctacggttac
tacaacaaccagcgtgctattggctggctcaagttccgtatgccgctgtcatacttcctg
gttggtgtgggaacggtggcctacagctacatggtggtcataagaacgatggcacgtaac
gcaaatgaatcgggggtcggtgacgataacagctttaattttagctggaagatgttcacc
agctgggactacctgataggaaaccctgagactgcagacaataagtttgcctccatcact
accagctttaaggaggcgatcttagaggagcaggagagctgtaaggacgacaacattcat
ctgactcgttttctacgcgtgctggccaacttcctggtcttgtgctgcctggcgggaagt
ggatacctcatctactttgtagtgcgtcgctctcagaagttcgccctcgaaggactggag
actcacacctggtgggaaaggaatgaggtgaacatggtcatgtcgttactggggatgttc
tgccccatgctgttcgacgtcatcagcgcgctggagaactaccacccccgagtcgccctg
cagtggcagctgggacgcatcttcgccctcttcctcgggaacctctacaccttcatcatc
gcactcatggacgagatcaacctcaaaagggaagaggagaagatcataaagtttaatatc
accatgtgggaagccagtctttacaatgcgacaggatcagaaaacagcacagctctcccc
gtcactttccatccagctgatgttcccagagggccgtgctgggagaccatggtgggccag
gagtttgtccggctgatcatttctgacaccatgactacgtacatcacgctgctgatcggc
gacttcttgcgagccgtgctcgttcgttttctcaactactgctggtgttgggacctggag
gccgggtttccgtcgtactccgagtttgacgtcagcgggaacgttttgggtctaatcttc
aaccaaggaatgatatggatgggagctttctacgccccgtgcctgccggcgctgaacgtc
ctgcggctccacgtgtccatgtacctgcagtgctgggccgtgatgtgctgcaacgtgccc
caggaacgcgtcttcaaggcctccggctccaacaacttctacatggccatgttgctggtc
atcctcttcctttccacgctgccggccatctacaccatcgtcaccatcccaccttccttc
gactgcggacccttcagtgggaagaaacgtatgtttgatgtgatccaggagactcttgag
tcagacttccctgcctggtttagtaaagtgttcagctatgcctctaaccccggactggtg
ctacccttcatattgctcatggtactggccatttattacttgcaatccacatccaaaagc
tacaaagaagctaacgtggacctgaagaaaaaactacagacgcaaaatgaggagaacaag
aggaagaacaaactggcggcgctgaaggcccagacggacctggaggaggccagagctgcg
acgcagacggccgagcagaagaacaacaacgcttcactacaacaccaacacgcagaggag
gaagaagacctcggcagtagtcagaggaagaacggacgccctcctccttcagttagacac
caagatggccggcctccggccaccagagcccccgcccccaggacccttcaccctgacacc
cacaggtctctggggtacctgcctgggggcgggttccctcagcaacgggaacccagaatg
caccgggtcccgagcctgcagagacactga
DBGET
integrated database retrieval system
