KEGG   Sander lucioperca (pikeperch): 116054228
Entry
116054228         CDS       T07345                                 
Symbol
polb
Name
(RefSeq) DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    116054228 (polb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116054228 (polb)
Enzymes [BR:sluc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     116054228 (polb)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     116054228 (polb)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     116054228 (polb)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 NTP_transf_2 HHH_2 Cdd1 DUF4806
Other DBs
NCBI-GeneID: 116054228
NCBI-ProteinID: XP_031161526
Ensembl: ENSSLUG00000011132
UniProt: A0A8C9YIX3
LinkDB
Position
2:6433293..6439137
AA seq 336 aa
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPNKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFEEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRAEMERMETLILGELKEIDTEYIGTICGS
YRRGAASSGDIDILLTHPDYTSQTQKQPKLLHAVVEHLESIGFVTDTLSKGDTKFMGVCQ
LQPSDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGVAGEPLLVDSERDIFEYIHYKYREPKDRSE
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgagcaagaggaaagcgccacaggaatccctaaatgagggaataacagactttcttgtc
gagctggccaattacgagaaaaacgtcaacagggcgatacacaagtacaatgcttacagg
aaagcagcatctaccatctccaagtaccctaacaaaatcaaaagtggcgaagaggccaag
aaactggatggtgttggagctaaaatagctgaaaagattgatgagttcctgcaaactggc
aaactacggaaactggaaaagatccgtaacgatgacaccagctcatccatcaatttcctt
accagagtcactggaattggccctgctgccgccaggaagttttttgaagaaggggtgaag
acgttagaagatttgaaaaagattgagcacaagctaaaccatcatcaacagattggactc
aagtactttgaggaatttgagaaaaggattccacgtgctgaaatggaacggatggagact
cttattcttggagagttgaaggagatcgatacagaatatattgggacaatctgtggaagc
tacaggagaggtgcagcatcgagtggtgatattgatattttgctgacccacccagactac
acctctcagactcagaagcagcccaagctcctccatgccgtcgtcgagcatttggagtct
attgggtttgtgaccgacaccctgtctaaaggagacaccaagttcatgggagtctgccag
ctgcaaccgagtgatgaagatgaggaagaataccttcacaggcgtattgatattaggtta
attcccaaggaccagtactactgtggagttctgtatttcactggaagtgatatcttcaat
aaaaacatgagaactcatgctctggagaagggcttcactctcaatgagtacaccattcgg
ccagttggggtcactggtgtggcaggcgagcctctgttggtggatagtgagagagacatc
tttgaatacattcactacaaatacagagagccaaaggaccgcagcgagtga

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