Sander lucioperca (pikeperch): 116054243
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Entry
116054243 CDS
T07345
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X4
KO
K21072
A-kinase anchor protein 28
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116054243
Membrane trafficking [BR:
sluc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116054243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank
Ank_2
PH_13
C1_2
DUF6158
PHD_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
116054243
NCBI-ProteinID:
XP_031161548
LinkDB
All DBs
Position
2:complement(6110582..6151838)
Genome browser
AA seq
1814 aa
AA seq
DB search
MELSRRKVPLYGQAKVFALLEGLDSVPEDAEVYVVLEGSTLVHVTMAQSDVMLCFIVPGH
NLAEVVSVQAYLCSETTPLIWVGGASLEYVQDDAQDLAEHLVIHGHCLSSTDHKELSSLF
NLGQESSRWAIDHHVALAMANLDIPPNWNVLGSHSGDEHSLRESPLHLAVRWGLYRLAEL
LLCQPGGLMAVSLPNEEGVTPLQLAQTAGSTELLELLTHPPNPLATPPAGLSQVWADRSR
LLRFCHDTGNLTLTVRQNLRWSSEESRHADILLLRDRLRDEDFLRELKALRRERVETILV
KNVENALYSDMNGAAVEKHDYEEPLMFCLTEEDEEDDPSQSYSEKSQSIRESQAPSPTLA
AAARLSAMIHGKDRVYANAMLVDQVDDADIKYRSPGEEEVSPAPHLGSHSWDSFSMTPPD
SGNCSHRHPSSPYNGERGIQGPGLENHKEPSPCISPTSPFASSPSFPSSPLASAFRLFEG
AQRRPTQPFLPVSPALNRRGYSLTEASRGLSPSLECDSGEEDLLVRSYPCSSVKKQSILQ
SSSGEERDSFDTSPDFNHTHSDSTHKSSKNPEEAEVRLRSYSYSSPKAKPSRPLLNRDAT
ITDLAEEQRAFSPTESTREKRVLGFRKRAQSAEEESGPSLQHLTLTEFLKEIEDEELDKY
IIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKVKGKEVKEGKEKSGAANGHQFVPVSPSG
PAFCVACDKSVSGKELLQCSNCFLNVHKNCRESVAACGKKPQERNALLTKSKTLSLPHNS
VKDNSPASIFSSSSTLPTTTREKRETVAPLSKSLSISIDSRRLSDAAGVDSECSATVCAN
SSLSDEGTAVSVTPPSAEPPITTQDAVDAPLMSDLSADLLGLEVESWSLAVSPEFCRQHA
RRTIKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLEELQLDWDCVARIFPCLDPLLLFH
RNLFGALQERRQASTQPENSRNYLIHQIGDILLQQFSDEHAEKMKQVYGEFCSHHTEAVN
VFKELQQQNKKLQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERILHYTQEGSQ
EHSDLSSAVAQIRDVIAAVDLTVNKYERCQEMQEVLARLENKSFAKLKNDKVFRKQDLHS
KHRELHYKGLVYWKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPPVIPLQKLI
VREVANEERGMFLISASSLGPEMYEVHTTTRDERNAWMRHIRQAVESCPEEEEEEEQRNA
ETEEARRVAEVRVQKITKFQETLLGQDQQICNSLEEKLQLYAELTELTLHSPEPVPHRHL
LVQADTDSEMPRQASSLLTAAVREAENLITILQARDGLTVKGPSSPVQGPECCSYNSHGS
SIQESPSEPDYLSTLSMSSTSLGSDSELTGLDSVLWSSAVELRRGDTKGTLLKVAESVQS
LTQLLYSLQAAVTLQDSCYEVQKLLLQEGERPPLRTLTSLQNSLEQERHRSIDKKKEEVE
KKGLESKKDKVDEMKKLHVKLRQEQQRWDKECLAREKQQCEQDSVLEQREQQCLLEAERL
RCEREVLDAQLLEYQQNLDRLREGQRSVEREKEKIEAQQRLLQTWRHNRQSSLPVTIPMD
GYKVSSHSRSGSLDANCSVYKNEVALLASLQQNHLHQPANNNQHQRLLSAPINNHDSPLN
SSSYTANIGLSASLYNSLNTLLSQAHSKQPPDDLTYPNYSNNHGCPRPLNDTIHPFSSRV
TAQPQKTNNTDFSPPLDRRPLGPWRSEVTGHRLYENEDVYSSSLSLTPLLPPQAYLSLEG
QNGEEGSEENIVYL
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggaaagtgcctctgtatggccaggcaaaggtatttgcattgctg
gagggtttagactcggtgcctgaggatgcagaggtctacgttgttttggaaggatccaca
ctggtccatgtcaccatggctcagagtgatgtaatgctctgctttatagtgcctggacat
aacctggctgaggtggtctctgtccaggcctatctgtgctctgaaaccacacccctcatc
tgggtgggcggagcttcattggagtatgtccaagatgatgctcaggacctagcggagcac
ctggtgatccacggacattgcctgagctccacagatcacaaggagctgagcagcctcttc
aaccttggccaggagagctctcgctgggctatagatcatcacgtggccctggccatggcc
aatctggatatccctccaaactggaatgtactggggagccacagtggagacgagcacagt
ctcagggagtctcccctccacctggctgtgcgatggggtctgtatcggctggcagagctg
ctgctttgtcagccggggggtctgatggctgtcagtctgccaaacgaagagggagtcaca
ccgctgcagctggctcagacagcaggcagcaccgagctcctggagctgctcacacaccca
ccaaaccctctagccacacctccagcaggtctgtctcaggtgtgggcagaccggtcccgc
ttgctgaggttctgtcatgatacggggaacctgactctgaccgtccgacagaacctgagg
tggagctcggaggagagccggcacgctgacatcctgcttctcagagaccggctcagagat
gaggacttccttagagagctcaaagctctaaggagggaacgggtggagaccatcttagtg
aagaacgtggagaatgcactgtattcagatatgaatggagctgctgtagaaaaacatgac
tatgaggagccgctgatgttttgcctgactgaagaggacgaggaggacgatccatcacag
tcttactctgagaaaagccagtccataagggagagccaggccccatccccaactctggct
gcagctgccagactgtcagcgatgatacacggcaaagacagagtgtacgctaatgctatg
ctggtggaccaggtggatgacgctgacattaaataccgctctccaggggaggaggaggtg
agccctgcaccccatcttggcagccatagctgggactccttctccatgactccccctgac
tcagggaactgctcccaccggcacccatcatcaccctataatggggagaggggaatccaa
ggccctggcctggagaatcacaaggagccatccccttgcatctcccccacctctcccttt
gcttcctccccgtcttttccttcctcccctctggcttccgccttccgtttgttcgaggga
gcacagaggcgtccgacgcagccatttctgccagtttctcctgctttgaaccgcagagga
tacagcttaactgaggcgagccggggcctgagtcctagtctcgagtgtgacagtggagaa
gaagacttactggtacgctcctacccctgctcatcagtaaagaagcagtccatcctgcaa
tccagctcaggagaggagagggactctttcgacacgtcaccagactttaaccacacacac
tctgacagcacgcacaagtccagcaagaacccagaggaagctgaggttcgcctgcgctcc
tactcctactcctcccccaaggcgaagccgtcacggccactgctaaaccgagacgcaacc
atcactgacctggcagaagagcagagagcattcagcccgactgagtctaccagagaaaag
agggttttgggtttccgtaagcgggcccagtcagcagaggaggagagtggcccatcgctc
caacacctcaccctcacagagttcctcaaagagatcgaggatgaggagttggataaatac
ataatcccgtcaaaggtcgaatcagagaagtacaaagtcagccggaccttcagcttcctc
aagagcaggatgtccagcactcgcaacaagaccaaggtgaaggggaaagaggtgaaggag
ggaaaggagaagtcaggagccgctaatggacaccagtttgttcctgtgtctccatctggt
cccgctttctgtgtggcatgcgataagtcagtttctgggaaggagctgttgcagtgctcc
aactgtttcctgaatgtccataaaaactgcagagagtctgttgcagcctgtggaaagaag
ccgcaggagaggaatgcattgctgactaaaagcaagaccttgtctctcccacacaactct
gtgaaagacaactctccagcctccattttctcctcttcgtctacacttcccacgacgacc
agagagaagagagaaacagtcgcccctctctccaaaagcctctccatctcgatagacagc
agacggctgagtgatgcagcaggggtcgacagtgaatgcagtgcgacagtttgtgctaac
agctcattgtctgatgagggaacagcggtctcagtgacgcccccttcagccgagccgcca
atcaccacacaggatgctgttgatgctcctctaatgagcgacctgtcagctgacctgctg
ggacttgaggtggagtcatggagtctggcggtcagtccagagttttgcaggcaacacgcc
aggcgcaccattaaacgacaggatgttatttatgagctgatgcagacagagcttcaccac
atccaaaccctgacggtcatgtcggaggtgttcaggagaggcatgctggaggagctgcag
ctcgactgggactgtgtggcccggatcttcccctgcttggaccccctgctgctgtttcac
agaaacctctttggagcactgcaggaacgccgacaggcttcgacccaaccggagaactcc
cggaattacctcatccatcagattggagatattctgcttcagcagttctcagatgaacat
gctgagaagatgaagcaggtgtatggagagttctgcagccatcacactgaggccgtcaat
gtcttcaaagagctgcagcagcaaaacaaaaaactgcaaaactttgtcaaacaacagagc
aataacactctggtcagacggagagaggtgcccgaatttatcctgctggtcactcagcgc
atcaccaagtacccagtgctgctagagaggatattacattacactcaggagggaagtcag
gaacactctgacctgtcaagtgctgtggctcagatccgtgacgtcattgctgctgtggac
ctgactgtgaataagtatgagaggtgtcaggagatgcaggaagtgctggcccggctggag
aacaagagctttgccaagctaaaaaacgacaaggtgtttcgcaaacaggatctgcatagc
aaacacagggagctgcattataaagggcttgtctactggaagactgccacaggacgcctg
aaagatactttggctctcctacttacagatgttctggttttcctacaagagaaagatcaa
cgttttgtatttgctgctgtggaccagaagcctcctgtaatccctctgcagaagctcatt
gttagagaggtagccaatgaggaaagagggatgttccttatctccgcctcctcattggga
ccagaaatgtatgaagttcacaccaccactagagacgagaggaatgcgtggatgagacac
atacgtcaagctgtagagagttgtcctgaggaagaggaggaggaggagcagcggaatgct
gagacagaggaggccaggagagtggcagaagtgagagttcagaagatcaccaagttccaa
gagacactgttgggtcaggaccagcaaatctgcaacagccttgaggagaagttacagctt
tatgcagagcttacagagttaactctccattcaccagaacctgtaccacatcgccatctg
ctggtacaagcagacaccgacagtgagatgccacggcaggcctcctcactgctcacagct
gcagtcagagaagcggagaacctgatcaccattctgcaggctcgtgatggccttactgta
aaaggtccgagctctccggtccaaggaccagagtgctgcagctacaacagccacggcagc
agcattcaggagtctccctctgagccagattatctgagcaccctcagtatgagctccacc
tctcttgggtcagacagcgagctgacggggctagacagcgtgttgtggagctctgctgtc
gagctgagacgaggagacaccaaagggacactgttaaaggtggcagagagcgttcagagt
ctgactcagcttctctatagtctgcaggctgctgtgaccctccaggacagctgctatgaa
gtccagaaactccttcttcaggagggagaaagacctccgctccgaaccctcacttccctt
caaaacagtctggagcaggagaggcataggagcatcgataagaagaaagaggaagtagaa
aagaagggtttagagagtaaaaaagataaggtggatgagatgaagaaactccatgtgaag
ctgagacaggagcagcaacgctgggacaaagagtgtctggccagagagaaacaacaatgt
gaacaggacagtgtgctggagcagcgggagcagcagtgcctcctagaggccgagcggctg
cgctgcgagcgtgaggtgctggacgctcagctgctggagtatcagcaaaatctggaccga
ctgagggagggccagaggagtgttgagagggagaaggagaaaatcgaagcccagcagcgg
ctactgcagacctggagacacaaccgccagagcagcctgcctgttacgataccaatggat
ggatacaaggtgtccagccacagccgctcaggcagcctggatgctaactgttcagtgtac
aagaacgaggtggctttacttgcctccctccagcagaaccacctccaccagcccgccaac
aacaaccagcaccagcgtctgctctctgctccgattaacaaccatgacagccctctgaac
agctccagctacaccgctaacatcggccttagtgctagcctctacaacagcctcaacacc
ctgctgagccaggcacacagcaaacagcctccggatgatctgacatacccaaactacagc
aacaaccacggctgcccccggcctctgaatgacaccatccaccccttcagcagcagggtc
actgcacagccacaaaagaccaacaacacagacttcagcccgccgttggacaggcgaccc
ctaggtccctggaggtcagaggtcacaggtcacagactttatgagaatgaggatgtctac
tcctcgtctctctctcttacacccctccttcccccgcaggcctacctctctcttgaagga
cagaacggggaggagggaagcgaggagaacattgtttatctctga
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integrated database retrieval system
