Sander lucioperca (pikeperch): 116054595
Help
Entry
116054595 CDS
T07345
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116054595 (cbll1)
04131 Membrane trafficking [BR:
sluc04131
]
116054595 (cbll1)
04121 Ubiquitin system [BR:
sluc04121
]
116054595 (cbll1)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116054595 (cbll1)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
116054595 (cbll1)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116054595 (cbll1)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116054595 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
116054595
NCBI-ProteinID:
XP_031162077
Ensembl:
ENSSLUG00000012902
LinkDB
All DBs
Position
20:2657876..2665520
Genome browser
AA seq
484 aa
AA seq
DB search
MDQSADNDLQGSDGSGILGGPDVRRRIPIKLISKQPIRSKPQPRTQRPSSRPCKSEAGED
DTFGFKQEERFDCGAKAGDVFATQRRFPQALFWDYKLNLIGERDEVPIHFCDKCGLPIQL
YGRMIPCKHVFCYDCALLHEKKGEKMCPGLTMYNCTDPVQRIEQSQRGALYMCSVVPGCK
RTYLSQRDLQAHVNHRHMRAKSSAGRQEPVHLPPASEVPDRFRVPPPHLPKNHVHLPNPL
QHGGHDPYSQPPPPTAHEAPPPTALGPETFRIATVTTRKHSNLITVPIQDDSSSREPLSG
GPGPSQPPHHHPGDYPGQPPVVSHSHHMMAPPQQHFGPPPPPPPPISHPMQHPPQASGTP
HMVYNQAPPPPMSTAPPPITPPPGHIMGQMPPYMNHPPPGPPPQHSGPPVNAPPPHHYNP
NSMQQFPEDQGTLSPPFSQPGGLSPGMWPAPRGPPPPRMQGPPPQGQMPGPHHPDQGRYR
PYYQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaagcgcagacaatgatcttcaaggaagtgatggttctgggattttgggtggc
ccagatgttcgcagacgaatccccatcaagctcatatctaagcagcccataaggagcaaa
cctcagccccgcacccagagacccagcagcaggccatgtaaaagtgaggctggagaagat
gatacctttggcttcaagcaagaggagaggtttgattgtggagctaaagctggtgatgtg
tttgcaactcagaggagattcccccaggcactgttttgggactataagttaaatttgatt
ggagaaagagatgaagtaccaattcacttttgtgataaatgtggtcttcctatccagcta
tatggacgaatgatcccctgcaaacatgttttctgttatgactgtgctttgctccatgag
aagaaaggagaaaagatgtgccctggcctcacaatgtacaactgtacagacccagtgcag
cgcatcgaacaaagccagcggggtgccctctacatgtgcagtgttgtgccgggatgcaaa
cgtacctacctgtcccagcgtgacctgcaggcccatgtcaaccaccgccacatgagggct
aagtcttccgctggccgacaggagcctgtgcacctgccccctgcatccgaggtcccggac
cgtttccgcgtgcctccacctcacctacccaagaaccacgtgcacctcccaaacccgctc
cagcacggtggtcatgatccctacagtcagccgcccccacctacagctcacgaagccccg
cccccgaccgctcttggtcccgagacattccgcattgccacggtaacaacccgtaagcac
agcaatctcatcaccgtgcccatccaagatgactcctcctctcgggagcccctctctggt
gggccaggccccagtcagccaccccaccaccaccccggggactatcctgggcagccgcct
gtagtgtcccactctcaccacatgatggccccgccgcagcagcacttcggcccgccacct
cccccgcctcctcctatcagccaccccatgcagcatcctccccaggcctctggtacacca
catatggtgtacaaccaggcccctccgccccccatgtccacagctccaccacccatcacc
ccaccaccagggcacatcatgggccagatgcccccctatatgaaccacccgccccctggg
cctccaccacagcacagtggccctcctgtcaacgcccccccacctcatcattacaacccc
aactccatgcagcagttccctgaagaccagggcaccctcagtcccccgttcagccagcca
ggagggctcagtcctgggatgtggcccgctccaagagggcccccacctccacgaatgcag
ggccctcctccccagggccagatgcccggaccacaccatccagatcagggccgctaccgg
ccttactatcagtaa
DBGET
integrated database retrieval system
