Sander lucioperca (pikeperch): 116054718
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Entry
116054718 CDS
T07345
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116054718 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116054718 (rbm26)
03041 Spliceosome [BR:
sluc03041
]
116054718 (rbm26)
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116054718 (rbm26)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
116054718 (rbm26)
Spliceosome [BR:
sluc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116054718 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
COG5_N
zf_CCCH_4
RRM_3
FapA
Motif
Other DBs
NCBI-GeneID:
116054718
NCBI-ProteinID:
XP_031162275
Ensembl:
ENSSLUG00000020915
LinkDB
All DBs
Position
3:30069656..30082597
Genome browser
AA seq
1006 aa
AA seq
DB search
MIIENLDALKTWLSETLEPICDADPSALAKYVVALVKKDKSEKELKALCIDQLDVFLQKE
TQPFVDKLFEAINNKNYLPQPEQPSSLIKVEKDEQKKDETNREDEREKKFPRRVNHSPSQ
SSSRYSRDIRRGDDRKRDDRSRKREYDRIPPRRDSYRDRYNRRRGRSYSRSRSRSWSKDH
IRDRDRERDRDRDRDRDRDRDRSRSRSHSRTRSGSRSTEQDPGKLKFDHDRVDRPESGDG
YTPALVPTATTSHFPVPTLSSTITVIAPTLHHSNNTTESWSDFRPGHPVDRGLFNRGPPP
QQRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPNMLPFQPPPIPGVDPPPPPGLP
PPPLMNPPPVNLRPPVPPPGTLPPSLPPVAGPPPPLPPLQPSGMDAPPNSMTSSVPTIVT
SGMRSSLPQPSVPRFTSDNYETDVYNPEAPSITNTSRPIYRHRVNAQRPNLIGLTMGEVD
HPPRDKIPNNSMRIVMESDSRKRPPVSHDGGLPSKKPWFDKPNFNNPNHQGYHKRVPFSP
NTKLLVRQIPPELNNISKLNEHFSKFGTIVNLQVAFQNDPEGALIQFASPDEAKRAMQST
EAVLNNRFIRVHWFRDDGSDGQGQSQSQQQPQPQPAMQPSATSPKQSVKDRLGPLLTANS
EPSQDSSVASQNSSKVSVKDRLGFAAKPAAPVEKVFSSLGLTKTVYNPAALKAAQKTSVE
ALKKKQEALRLQQDVRKKKQEILEKHIETQKLLISKLEKNKAMKAEDKAKIMETLGMLTK
SITKLQEEIKGISGSNNPLRAAKSKAQAQKELLDAEMDLYKKTQTGEDTALLKIKYTQLQ
IEAAKRGLLSPGRGRGVHTRGRGALRARGRGSRGRGRGVSLHAFVDYRPRAMEISGFTEA
DHVDLLPHFAQFGEIEDCQIDENNLSAVITYKTRAEAEQAALHGVRFNNQTLRLAWHKAA
TTLSTADADEAEPEEDEYPEESLSDDALLQDDDEEEDDNEPRSWRR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaaccttgatgccttgaaaacatggctgtctgaaaccctcgagcctatc
tgtgatgctgacccttctgccctcgccaagtatgttgttgctttggtgaagaaagacaaa
agtgaaaaggaacttaaagccctgtgcatagaccagttggatgtatttctccagaaagag
acccagccatttgtggataagctgtttgaagccattaacaacaaaaactacctcccgcag
ccagagcaaccatcctctctgatcaaagttgagaaagacgagcagaaaaaagatgagaca
aaccgggaagacgaacgagagaagaagtttcctcggcgagtgaatcacagcccatcgcaa
tcaagctcacgttacagcagagatatcaggagaggagatgatcgtaagagagacgaccgc
tccaggaagagggaatatgaccgcattccaccaaggagggactcataccgcgatcgctac
aatcgcaggagaggtcgcagttacagtcgtagccgcagccggagttggagcaaagatcac
atccgagaccgcgacagagaaagggacagggacagggatagggacagagatagggatcgc
gatcgcagcaggagccggtcacacagcagaactcggtctggaagcaggagtacagaacaa
gatcctggtaaattgaagtttgatcatgatcgagtggacaggccagagagtggggatggc
tacaccccagccctggtacccactgcaaccacttcacacttccctgtaccaacactgagc
agcaccattacagtcatcgcccccacacttcatcatagcaacaacaccactgagagttgg
tcagacttccgccctgggcaccctgtggatcgtggcctttttaataggggaccaccccct
caacagaggaagagatgccgtgactatgatgaaaagggcttttgcatgaggggggacatg
tgtccttttgaccatggaagtgacccagttgtagtggaggatgtcaatttgcccaatatg
ctgcccttccaacctccaccaatcccaggtgtggacccaccaccgcccccaggccttcca
ccaccacctctcatgaaccccccacctgtgaacctgcgcccccctgtgcccccaccgggc
acccttccacctagccttccacctgttgcaggtcctcctcctccgcttcctcctctgcaa
ccgtcgggcatggatgctcctcccaattccatgaccagctctgttcccaccattgtcacc
tctggcatgcgctcctcacttccccagccctcagtgccacgcttcacctccgacaactat
gagacggatgtgtacaatcctgaggctcccagcatcaccaatacctccaggccgatctac
cgccatcgggtcaatgcccagagacccaacctcattggcctcacaatgggtgaggtggac
catccaccgagagacaagatcccaaacaacagcatgaggatcgttatggaatctgattcg
aggaagaggccccctgtctcccatgatggaggcctcccctccaagaaaccttggtttgac
aaacccaactttaacaaccccaaccaccagggctaccacaaaagagtcccattctctcct
aacaccaagctgctggttcgacaaattccccccgagctcaacaacatcagcaaactcaat
gaacatttcagcaagtttggcaccattgttaacctacaggtggccttccagaatgaccca
gagggggcactgatccagtttgcctctccagacgaggccaagcgggctatgcaaagcaca
gaggctgttctcaacaaccgcttcatcagggtgcactggtttcgggacgatgggagtgat
ggacagggccagtctcagtcacagcagcagcctcagccacagccagccatgcagccctca
gccacctctcctaagcagtctgtcaaagatcgcctcggacccctgctcactgcaaactca
gagccctcacaagattccagcgtagcctctcagaattcctctaaggtgtcggtaaaggac
cgtttaggttttgctgccaaaccagcagctcctgttgaaaaagtgttttcgtccttgggc
ctcacaaagacggtttacaatcctgctgccctgaaggcagcccagaaaacctcagtggaa
gccctgaagaagaaacaggaagctctaagactacagcaggatgtaaggaagaagaagcag
gaaatattggagaagcacattgagacacagaagctcctgatatccaaacttgagaagaac
aaagcaatgaaggcagaggataaagccaagatcatggaaacgttgggcatgttaaccaag
agcatcaccaagctacaagaggagataaagggaatctcaggcagcaacaacccactacgc
gcagccaagagcaaggcccaggcacagaaggagctgctggatgccgagatggacctgtac
aagaagacccagacgggagaggacaccgctttgttgaagatcaagtacacccagctgcaa
attgaggcggctaaaaggggactcctgtcaccaggacgaggccgtggggtccacactcgg
ggccgcggtgctctcagggcccggggaaggggctccagaggacggggaagaggtgtgtca
ctgcatgcattcgtggactatcgaccccgggcgatggagatttctggtttcaccgaggca
gaccatgtagacctgctgccacactttgctcaatttggagagattgaagattgccagatt
gatgaaaacaacctgtctgcagtcatcacttacaagacaagagcggaggcagaacaggcg
gctcttcatggagtgaggtttaacaaccagactttacgcctggcctggcataaggccgcc
acgactctcagtactgcggatgctgatgaggcagaaccagaggaggatgagtacccagaa
gagtcgctgagtgacgacgcgttactacaggatgatgatgaggaagaagacgacaacgag
cctcgctcctggcgcagatga
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