Sander lucioperca (pikeperch): 116054794
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Entry
116054794 CDS
T07345
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
116054794
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116054794
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116054794
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116054794
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Protocadherins
116054794
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
116054794
NCBI-ProteinID:
XP_031162396
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Position
3:30969794..30974181
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AA seq
889 aa
AA seq
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MFNSRHPSLSKRGGIWGLCILLLYTSPLSCFANFSKAKELIYKIKEGLPRGTFIGAIGVD
LNLDFTVEPPFLFNLPQKKVSGQYVSLNNTTGELYTSAIDIDRETLCPDNSEGHGCVLSL
DVFVLPQQYFQLVKVKIFIEDVNDNRPKFPVDEICMSVPENTPINARYAVEQSAVDPDLG
LHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVTDALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQINVTLHGNTTKGAHLARLHAFDHDLDANAQISYAYS
ERVPRDTRSLFHLDRITGVIKLAGKIDTGTATFYKLTILANGPGCIPAVATVSVHVIKVV
TGPPALIPRYIAPEKDGVVTIKESEPAFSPIAFFTVKTIDMNHRVDCHLEGTGPFRLGPY
QLFKNEYLLETTESLDYEKIQEYELIVVAKNAQELVIKTFLKVQVLDENDNAPVFQQSLV
EISVEENNPPNTFLTQLQATDQDSESRGEVIYLLGGDAPGIFVVDRVTGVLTVTTSLDRE
EKETYRFIARAVDQGTPRRESIATVVVSVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ARSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIVKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREAEIEVEERPWYKGQMTEGPERYELFPCQPVLIALSVTCLGLF
FSVVTLTSYICCKRFKKQRKKRSEVEIPLKMKNDSMQVVNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagcagacaccccagccttagcaaaagaggaggaatatggggactgtgcatc
ctcttgctttacacaagcccgctttcctgttttgcaaatttcagcaaagcaaaagagctg
atctataagataaaggagggattacccagggggaccttcataggggccattggagtagac
ttaaatttggattttactgtggagcccccctttttattcaatcttccacaaaagaaggtc
agtggacagtatgtgagcctaaataataccactggggagctttacacatctgctatagac
attgacagagagaccctctgtcctgataactcggagggccatggatgtgttctctcactg
gatgtgtttgtgttgcctcagcagtactttcagctcgtgaaagttaagatctttattgag
gatgtgaatgacaacaggccaaagttccctgtggatgagatctgtatgtctgtcccggaa
aacacacctatcaatgctcgttatgcggtggagcagtcagcagttgacccagacctgggt
cttcacggtgtacagacctactggcttgttaatgactttggcatgttcacactggatgtt
gaggagaatgaaggaggtgagctgacacccttcctcattgtgacagacgctttggacaga
gagacccaggctgaatacattacagatatcattgcagaggatggagggacccctcctcta
ctcggagcggctactttaaaaattgtcatcacagatgtgaacgataactgcccccaattc
acagagtcacaaattaatgtcactctgcatggaaataccacaaaaggggcacatttggca
cgtctgcatgcttttgaccatgaccttgatgctaatgctcagatcagctatgcttacagt
gaacgtgtgccaagggacaccaggagcttgttccatttggacagaatcacaggggtgatc
aagctagcagggaaaatagacactggcacagccacgttttacaaactcaccattctggcc
aatggacctggttgtatccctgcagttgccactgtttctgtccatgtcatcaaagttgtt
acaggaccccctgctctcataccccgatacattgcaccagaaaaggatggggtggtgaca
ataaaggagtcagagccagcgttttctccaattgctttttttactgtcaaaaccattgat
atgaaccatagggtggactgtcatttggaagggactggcccattcaggcttggcccctat
cagctgttcaagaatgaatacctgctggagactacagagtccttggactatgaaaagata
caggagtatgagctaattgtggttgctaagaatgctcaagagcttgtcatcaagaccttc
ctcaaggtgcaggtattggatgagaatgataatgcaccagtgtttcagcagtctttggtg
gaaatatctgtggaggagaacaatccgccaaatacctttctgacccagctccaagccaca
gaccaggacagcgaaagcagaggggaagtcatctacctccttggaggtgatgccccaggg
atctttgttgtggatcgtgtgacaggcgtcctgactgtgaccacatcgctggaccgtgag
gagaaagagacgtaccggttcatagcgagagcagtggaccaggggacacccaggagggag
tcaattgcaactgtggtggtgagcgtgcaagaccgcaatgacaacagtccgcgcttcatt
aataaggacttcacgttctttgtgccagagaacttcccagggtacggtgaaattggggtc
ctctctgtgacagatgctgatgctggggaaaatggttgggtggccctttctatcctcaac
ggcagcgacatctttatgatagatacaggccgaggggcactgagggccaagacatcactg
gaccgtgagcaacaagggacataccagctgtggattgaggccgtcgatggtggagagcct
gcacgttcctgtgtgactatggtgaccgtgctgttgttggatgtaaatgacaacccgcct
attgtcctcttcccccaatccaatcagtcatacatgctggtactacccaatacactacca
ggaacatcaataacagaggtctacgctgtggataaggatacaggcatgaacgctgtgatc
gcctacagcatcgttaagaggaaaggtggtgaaccagggtcatttgccattgacccagaa
acaggaaacatcacattaaagagggagctgagcaaccgggggctctatagccttctggtg
aaggtcagtgatcatggtcagcctgaaccactttactcaacagtcatggttaacttcttt
gtcaatgaaacagtaagcaacgagagttacatccagagtctgctgaccagagaggctgaa
attgaggtagaggagagaccttggtacaaaggccagatgacagaggggcctgagaggtat
gagttgttcccctgtcagcctgtcctcattgctctttcagtgacatgtctggggctgttc
ttctcagttgttacactgacatcttacatatgctgcaagagatttaaaaagcagcgtaaa
aaaagatcagaagtggagataccgttaaaaatgaagaatgactcaatgcaggttgtgaac
agaaagctcaggcagatctcaaacatctga
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