Sander lucioperca (pikeperch): 116054949
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Entry
116054949 CDS
T07345
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116054949
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
116054949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
116054949
NCBI-ProteinID:
XP_031162558
LinkDB
All DBs
Position
5:29856834..29918332
Genome browser
AA seq
1793 aa
AA seq
DB search
MPQPGLVCFLSCVLMVFFSSPPPADGQTAVSGGGGGVERIQVMFTPTICKVRCSQDRCVN
YCERGNVTSLYSDGGDGGGGGRRDGSHGPGFRVFLCPLLCKNGGICVQKDRCLCPPNFTG
KFCQMPTAVAAAASPSSTNEIVKPALLSAMASNQELTQSEFLLPLGRSQEAGRPAAVGPS
LVKVSVQHPPEASVKIHQVLKVSGFSPTLRTLPSSSGSAGAPAPAHGAGVQAQTVRGDDT
FSQQSGFKYCFREVRDGQCSSPLPGLRSRETCCRGFGKAWGISDCVLCPDNTGQSNSSCP
AGFERANGTQCVDVNECLHPGLCENGICVNTRGSYSCVCRAGFILDASHGICISTSVISE
EKGQCHRVLGSGQGRSSCSLPILRNITKQICCCSRVGKAWGPDCQRCPYFGSVAFKEICP
AGPGYHYSASALQFNQRVAEQLGSRGALLVPHGNQDKQGPGSGSRSQQIPSSSGATAMGV
STSLSSASGVGSSGGSAGASRTHIRPSLPQPHPQPRPGVSPSARPVQPGGSGASATQDNA
QTPGRAGPLQNRPDPAPSITRQPKPQPPSTGSQAGGRSSPVSRPNPPAERGVSLPAPAQP
QSPERGSRPSGELPPAVSPTARPARVQTVRGVCESRPGVCGRGRCVDQPGGKHSCVCDQG
HQPNAQNTHCQDLNECVQSPGVCAVGQCVNTVGSYRCACPSGYRSGSQQTSCQDIDECLQ
NPCSDGRCDNTPGSYRCVCRLGYRLRGNTCTDVDECEDSLQCPGQECVNSQGSYRCVSCR
PGFTLINRLCADIDECRQAVCTNGRCENTPGSYQCVCRHGYKLQNNTCTDVDECAEPSQC
PGQMCVNTVGSYRCVSCRPGYTLINRQCSDVNECEDGESCPGRQCVNTDGSFSCTDCQQG
YHSVNGLCADVDECVQASQCPGQQCVNTVGSYHCVSCQQGYSSKDGFCHDVDECASVGAC
DAGRVCVNTIGSFRCNCPPGYRTSGLGRQCRDINECLEGDFCFPRGECVNSPGSYTCVCS
QGFTLTDNRTACIDVDECVKSGVCLDGRCVNTEGSFQCQCQTGFTTNPEGTACLDVDECV
SSHGSVCASQRCENTIGSYRCLTSCEPGYQVTQSGSCVDVNECANETMCGDHAVCNNLRG
TYQCVCDRGFSSVADGKACVDVDECVKSGVCLDGRCVNTEGSFQCQCQTGFTTNPEGTAC
LDVNECANETVCGDHAVCNNLRGTYQCVCDRGFSSVADGKACVDLDECVSLPGVCGSARC
ENVEGSFMCECDREGEEYDTSSQRCVNTAPQAETAPTYPSISFSSSDVSVVRLLPGLPPL
PPARPGELRECYYNLAEQGACNVLAVNTSQQECCCTLGEAWGLGCRFDACPPAYTAEYLS
LCPSGRGYVNTGPGAFSYTDVDECKRFHPAVCKFGTCVNNIPGYECYCPNGYIYDSTMLE
CVDHNECEEESCVGGQCVNTVGSYYCRCPSPLVLDDTQRNCVNSSHLTVDENLSLCWQQV
TADLVCQSPLLGAQVTYTDCCCLYGEGWGMECALCPPTDSEGYSSLCSSFLPASSLSGGE
TGARPGAGRVRGGAGPPYLPPYSTDSFPDYEDYSAGGGSRTAFRGRTPDGSYGRQEYSTG
YYPEGDFGPPDADPRAERGFEARPPPPAWPDAPPLNLAPYPVELQPDTEDAEEPWRQGPP
FTERGGGGAPRRVYERRYESYAGLGTAEDCGILHGCENGRCIRVAEGYTCDCYQGYELDM
TSMTCIDVNECEDNVGVGFPCVNARCVNTEGSFRCVCRRGYVMSRRPNHCVAA
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagcctggactggtctgctttctgtcgtgcgtcctcatggtcttcttctcttcc
cccccgccagcggatggacagacggcggtctccgggggaggagggggggtggagaggatc
caggtgatgttcacgcccaccatctgcaaggtgcgctgcagccaggacagatgcgtgaac
tactgcgagcgaggcaacgtcacctcgctgtacagcgacgggggagacgggggaggaggg
gggaggagagacggctcccacggaccgggcttcagagtcttcctctgccctctgctctgt
aagaacggaggcatctgcgtgcagaaggatcgctgcctctgcccaccaaacttcaccggg
aagttctgccagatgcccaccgctgtagccgcagccgcgtcgccctcctccaccaatgag
atcgtcaagcccgcgctgctctctgccatggcatccaatcaggagctgacccagtctgag
ttcctgctgccgctggggcggagccaagaggcagggaggcctgcagctgtcgggccctcc
ctggtgaaggtgagcgtgcagcacccccctgaggccagcgtgaagatccaccaggtgctg
aaggtgtctggattcagtcccaccctccggacgctcccgtcctcctcggggtcagcgggc
gctccggcgccggcgcatggcgcgggggtccaggcccagacggtgagaggggacgacacg
ttcagccagcagtccgggttcaagtactgcttcagggaggtcagagacggacagtgcagc
tctcctctgcccgggctgaggagcagggaaacgtgctgcagagggttcgggaaggcctgg
ggcatcagcgactgtgtcctctgtcctgataacacaggtcaaagcaacagcagctgtcct
gctggttttgagcgagccaatgggacgcagtgtgtcgatgtgaatgagtgcctccatccg
gggctgtgtgagaacgggatctgtgtgaacaccagggggagctatagctgtgtgtgtagg
gcggggttcatcctcgacgcctcacatggaatctgcatctccaccagtgtgatatcggag
gagaagggtcagtgtcatcgggtcctgggttcgggtcagggccggtcctcctgctccctg
cccatcctcaggaacatcaccaaacagatctgctgctgcagccgagtcggcaaagcctgg
ggacccgactgccagaggtgtccctactttggttcagtggcctttaaggagatctgtccg
gccgggcctggttaccactactcagcttcagccctgcagttcaaccagagagtcgcggag
cagctggggagccgcggcgctctgctggtacctcacgggaaccaggataagcagggtcct
ggttctgggtccaggtctcagcagataccctcttcctctggagccacagcaatgggagtg
agtacttcactgagttctgcttccggtgtcggatccagcggcggatcagctggtgccagc
agaacccacatcagacccagtctgccccagcctcatcctcagccccggccgggcgtctcc
ccgtccgcaaggcccgtgcagcctggcggctccggcgcctcagccacccaggacaacgcc
cagactccaggcagagccgggcccctacagaaccggcccgaccctgccccgtcgatcaca
aggcaaccaaaaccccagcctccatccaccgggagtcaagcaggcggtcgctcctcccct
gtgtcccggcccaatccgccggcagaaagaggggtctctctccccgctccggcccagcca
cagagccccgagcgtgggtcaaggcccagcggagagctccctccagctgtcagcccgacg
gccagaccggcccgagtccagacagtgcgaggtgtgtgtgagagcagacccggtgtgtgt
ggccgtggccgctgtgtggatcagcccggagggaaacacagctgtgtgtgtgatcaggga
caccagcccaacgctcagaacacacactgccaagacttgaacgagtgtgtgcagtctcca
ggtgtgtgtgcagtaggacagtgtgtgaacaccgtggggagctacaggtgtgcgtgtccg
tccggataccggagtggcagccagcagaccagttgccaagacatcgacgagtgtctgcag
aacccctgcagcgacggtcgctgtgacaacacgccgggcagctacaggtgtgtctgtcgc
cttggttacaggctcagaggaaacacctgcacagatgtggacgagtgtgaggactctctg
cagtgtcccggtcaggagtgtgtcaacagccagggctcgtaccgctgcgtgtcgtgtcgg
ccgggcttcaccctgatcaacaggctctgtgcagacatcgacgagtgtcgccaggcggtg
tgcaccaacggccgctgtgaaaacacacccgggagctaccaatgtgtctgtcgccacggt
tacaagctccagaacaacacctgcacagatgtagatgagtgtgcggagccgtctcagtgt
cccggtcagatgtgtgtgaacacggtgggatcgtaccgctgtgtgtcctgccgaccagga
tacacactcatcaacagacagtgttcagacgtgaatgagtgtgaggacggagagtcttgt
cccggtcggcagtgtgtgaacactgacggatctttcagctgcacggactgtcagcagggc
taccacagtgtcaacggactgtgtgcagatgtggatgagtgtgtccaggcctctcagtgt
cccggtcagcagtgtgtgaacactgttggatcgtaccactgcgtatcctgtcagcaggga
tacagcagcaaggatggcttctgccacgatgtagacgagtgtgcgagcgtcggggcgtgc
gacgcaggccgggtttgtgtcaacaccatcggctccttcaggtgtaactgtccacccggg
tatcgaacctccggcctgggcagacagtgcagagacattaacgagtgtttggagggggat
ttctgtttccccagaggagagtgtgtgaactctccgggctcctacacatgtgtgtgttct
cagggattcactctgaccgacaacaggacggcctgcatcgacgtggacgagtgtgtgaag
tcgggtgtttgtttggacggtcgctgtgtgaacactgaaggctccttccagtgccagtgt
caaactggcttcaccaccaacccagaggggaccgcctgcctcgatgttgatgagtgcgtc
tcgtcccacggctcagtgtgtgcgtcacagcggtgtgagaatacgattggctcgtaccgc
tgcctaacttcctgtgagccgggctaccaggtcacacagagcggcagctgcgtggatgtg
aatgaatgtgccaatgagactatgtgtggagaccacgccgtctgtaacaacctgagagga
acctaccagtgtgtgtgtgaccggggctttagctccgtcgccgacgggaaggcctgtgtg
gacgtggacgagtgtgtgaagtcgggtgtttgtttggacggtcgctgtgtgaacactgaa
ggctccttccagtgccagtgtcaaactggcttcaccaccaacccagaggggaccgcctgc
ctcgacgtgaatgaatgtgccaatgagacggtgtgtggagaccacgccgtctgtaacaac
ctgagaggaacctaccagtgtgtgtgtgaccggggctttagctccgtcgccgacgggaag
gcctgtgtggatttggacgagtgtgtgtctctgccgggtgtgtgtggctctgctcgctgt
gagaacgtggagggatccttcatgtgtgagtgtgaccgagagggagaggagtacgacacc
agcagccagcgctgtgtcaacacggcaccacaagcagagacagcccccacctacccctcc
atttccttttcctcctccgacgtcagtgtggtgaggctgcttccggggctgccccccctc
ccgccggcgcgtccaggtgagctgagggagtgctactacaacctggcggagcagggggcc
tgcaacgtgctggctgtcaacaccagccagcaggagtgctgctgcacgctgggcgaggcc
tgggggctgggctgccggttcgacgcctgcccccccgcatacacagccgagtatctgtct
ctgtgtcccagtgggaggggatacgttaatactggacctggagccttcagctacaccgat
gtggacgagtgtaagcgtttccatccagcggtgtgtaagtttggaacgtgtgtcaacaac
atccccggatatgaatgctactgccccaacggatacatctacgacagcacaatgctggag
tgtgtcgaccataatgagtgtgaggaggagagttgtgtgggaggacagtgtgtgaacacg
gtgggttcctactactgccgctgtccgtctcctctggtgctggacgacacgcaacgcaac
tgtgtcaactcgtcccacctcactgtggatgagaacctgtctttgtgctggcagcaagtc
accgcagacctggtgtgtcagagtcctctgctcggagctcaggttacctacacggactgc
tgctgtctgtacggagagggctgggggatggagtgtgccctctgcccccccaccgactcc
gagggctactcctctctgtgcagctccttcctccctgcgtcctccctctccggaggagaa
accggagcgagaccaggagccggacgagtccgcgggggagcgggtcctccgtacctcccc
ccctacagtaccgactccttccctgactacgaggactactctgcagggggcggcagcagg
acggccttcagagggaggacaccggacggatcctacggcaggcaggagtacagcaccggt
tactaccctgaaggagactttggcccccccgatgccgacccccgggccgagagggggttc
gaggcgcggcctccccctccggcctggcccgacgcaccccctctcaacctggcgccctac
ccagtggagctgcagccggacacagaggacgctgaggagccgtggaggcagggcccgccg
ttcactgagaggggaggagggggggccccgcgcagggtctatgagaggcgttacgagtcc
tacgccggcctgggcacagcagaggattgtgggattctgcacggctgtgagaacggcagg
tgtattcgcgttgccgagggctacacctgtgactgttaccaaggatacgaactggacatg
acctccatgacgtgtatagatgtaaacgagtgtgaggacaacgtcggcgtgggcttcccg
tgtgtgaacgctcgctgtgtgaacacagaaggctcgttccgctgcgtctgccggagagga
tacgtcatgtcccgcagacccaaccactgtgtggctgcgtag
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