Sander lucioperca (pikeperch): 116055094
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Entry
116055094 CDS
T07345
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116055094
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Protocadherins
116055094
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RibLong
TMEM154
Motif
Other DBs
NCBI-GeneID:
116055094
NCBI-ProteinID:
XP_031162728
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All DBs
Position
9:complement(40261779..40271867)
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AA seq
1011 aa
AA seq
DB search
MGEIGWNGLLVLACVSWASLAAVTQGKTVKYQTFEEDAPGTVIGNLAKDISSTASSSGGS
RTNFRMMKQFNSSFIRLRESDGQLTIGERIDRERTCKHMLQCLIAFDVVSFSKEQFKLIH
VEVEVKDINDNSPEFPRKESSLEISENTAVGTRIPLDFAVDEDVGANYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQASYALELVAMDGGNPSRTGTTRINVKVKDYNDN
SPVFDRNSFSVDLPEDAPVGFLLLDLNAEDPDEGLNGEVVYGFGNQVPTEIRQLFRVDRK
TGRLTVESPIDFESKNTYEFDVQATDLGPNPSPAICKIVVQVQDVNDNAPEISITPMTSI
TAGIAYITEAAARESFVALVSTSDRDSGANGQVHCTLYGHDHFRLQQAYEDSFMIVSTSP
LDREKIPEYNLTVVAEDLGSPPFRTITQYTIRLTDENDNAPVFSKPVYEVAVVENNAPGA
YITTVVARDMDMGSNGKVSYKLADTYFMGSPISTFVSLDPASGSLYALRSFNYEMMKQLE
LRITASDGGSPPLSGSANVYVRIVDQNDNTPVITQPPLNNGSAEVLLPRDAPSGYVITRV
EARDADEGVNAEVSYGLATGEPSVFSVNKATGEIYLNQVLSHDVDETLSVTVTVSDNGRP
ALTSTATLNFLIIAGSPPSDRTVYHSGSGDEVYAQWDLSVVIIVVLAGSCTLLLLAIILI
ATTCNRRKRDKSGEDSDSYGEKGTLERGRNHVGDNPLLPLHETGGGAGFDGHSYSSQPGG
FTSAHPGGSDMCSASEDGSEVPCVYDSDSNSKPRGNKHEGYSTLPGYGNAKEAVRPITIW
KGNSYTTISARDPAFSGKDSGKGDSDFNDSDSDVSGDTGLKKDGAVVPPMGGQNALWACT
SECKVLGHSDRCWSPSAVRANAAPSPAPTLSSFSSLSKTASLPRDPHRRDNYYQAHIPKT
VGLQSVYEKVLHREYDYVLVTPPRPVRVQEISDITIPVYTPTPTHCPNNDV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaatagggtggaacgggctgttggtgctagcgtgcgtctcttgggcaagcctg
gctgctgtcacacaaggaaagacggtgaaatatcagacattcgaggaagacgcaccaggg
acagtgattggaaacttggccaaggacatctcctccactgcctcttcctcggggggctcc
aggaccaatttcaggatgatgaaacagttcaactcctctttcatccggctgagggagagc
gacgggcagctgaccatcggagagaggatagacagggagcgcacctgcaaacacatgctg
caatgcctcatcgcttttgacgtggtcagcttctccaaagagcagttcaaactcatccac
gtcgaggtggaggtcaaggacatcaacgacaactcccccgagttcccccggaaagagtcg
agtctggagatctccgagaacacagcggtgggcacgcggataccgctagactttgccgtg
gatgaggatgttggggcgaactacatccaaagctaccagatctccgtcaacagccacttt
tcaatcgacgtgctcagcagggccgacggggttaaatatgcggagctggtgctcatgaag
gagctggatcgggagacgcaggcttcttacgcgctggagctggtcgctatggacggtggc
aacccgtcccgcaccggaacaacgcgcatcaacgtcaaggtgaaagactataacgacaac
agcccggtgttcgacaggaacagcttctccgtggacctgcccgaggacgcaccggtgggc
tttctcttgctggacctgaacgcggaggatccagacgaggggctgaacggtgaggtggtg
tacgggttcggtaaccaggtgcccacagaaatacggcaactcttcagagtggacaggaag
accggacggctcaccgtcgagagcccgattgactttgaaagtaagaacacgtacgagttt
gacgttcaggcaaccgatctgggtccgaacccgagcccggccatctgcaaaattgtagtg
caggtgcaggatgttaacgacaacgcaccggagatctccatcactcctatgacgtccata
acggcggggatagcgtacattaccgaggcggcggccagagagagtttcgtggctctggtc
agcacctcggacagagactccggcgctaacgggcaggtgcactgcacgctctacggacac
gatcacttcagactacagcaggcgtacgaggacagcttcatgattgtgagtaccagcccg
ttagaccgggagaaaatccccgaatataacctcacagtagtggcggaggatctgggctcc
cctcccttcaggaccatcactcagtacacaatcagactgactgacgagaacgacaacgct
ccggtgttcagtaaaccggtgtatgaagtggccgtggtggagaacaatgctcctggcgca
tacatcaccactgtggtggcgcgggacatggacatggggtcaaacgggaaggtcagctac
aaactggcagacacatatttcatgggctcccccatttccaccttcgtgtcactggacccc
gccagcgggtcgctttacgcgctccggagcttcaactatgagatgatgaaacagctggag
ctccgtatcacggccagcgacggcggctccccgcctctgtctggcagcgctaacgtctat
gtgaggatagtggaccagaatgataacacaccggtcatcactcagccgcctctcaataac
ggctccgctgaagtcctcctgccccgggacgcaccgagcggctacgtcatcacacgggtg
gaggcgcgggacgcggatgagggcgtgaacgcagaagtgtcctacgggctggccaccggt
gaaccctccgtgttctctgttaacaaagccaccggggagatctacctcaaccaggtgctc
agccatgacgtggacgaaactctgagcgtgaccgtgacggtgagcgacaacgggaggccc
gcgctcacctccaccgccacgctcaacttcctcatcatcgcgggctccccgccgagcgac
aggacagtgtaccattcaggcagcggggacgaggtgtacgcgcaatgggacctgtccgtg
gtgattatcgttgtcctcgcggggagctgcacgctcctgctgctcgccatcatcctcatc
gccaccacctgcaaccggcgcaagcgagacaaaagcggagaagacagcgactcgtatggg
gagaagggcacgctcgagcggggcaggaaccacgtgggggacaacccgcttctgccactc
cacgagaccgggggaggagcgggctttgatggacactcctacagcagccagcccggtggg
ttcacctcggctcaccccgggggcagcgacatgtgctcggcctcagaggacggcagcgaa
gtgccctgtgtgtatgactcagacagcaacagcaagcctagagggaataaacacgagggc
tactccactctgcctggctatgggaacgccaaagaggctgtgaggcccatcactatctgg
aaggggaactcttacaccaccatctctgccagggacccggccttcagtggcaaagacagt
ggcaagggagacagtgacttcaatgacagtgacagtgatgtcagtggggacactggcctg
aagaaagatggggcagtggttcctcccatgggtggccaaaatgctctgtgggcttgcacc
agtgaatgtaaggtcctgggtcactcagatcgctgctggagcccctcagcagtaagagcc
aacgcagcgccctctccagcccccaccctctcctctttcagcagcctctccaagacagcc
tccctgccccgggacccccaccgccgggacaactactaccaggcgcacatccccaaaacc
gtgggtctacagagcgtgtacgagaaggtgctgcacagagagtacgactacgttctggtc
accccacccagacctgtgcgggtgcaggagatcagtgatataaccatccctgtttacacc
cccaccccaacacactgtcccaacaatgacgtctaa
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