Sander lucioperca (pikeperch): 116055152
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Entry
116055152 CDS
T07345
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sluc04054
]
116055152
Pattern recognition receptors [BR:
sluc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116055152
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
LRR_8
AFG1_ATPase
DFF-C
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
116055152
NCBI-ProteinID:
XP_031162815
LinkDB
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Position
21:complement(790159..838229)
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AA seq
1104 aa
AA seq
DB search
MSDDVLMNDWTAALSVSSPDEGVDSAMSPCEDREEGVPPSKTTLCGEHDSQTKAQSPEKQ
HRPGPGPGPSCVSMKSDRSMGCFKNFKDGRHSVDQRVDQESSQVPSGQSAQQHQRHLDSI
FMLLQEDINTFVKNELKKIQKVLSPDYLECLKSQREDEEVLDNEDEEQRRSSREAFLKIT
LHFLRRMKQEELADRLQSRSLTAVGKRKLKSNQQKKFQCVFEGIAKAGNPTLLNQMFTEI
YIIEGGTAEVNDEHEVRQIETASRKPDRPETRIRQEDIFKTPPGREEPIRTVMTKGVAGI
GKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKEEKYSLVELVDRFFSETKEAGIC
RFEEVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRP
AAANQIPPECVDMVTEVRGFTDPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPV
FCWITGTVLEDVLKTREGGELPKTLTEMYIHFLVVQSKVKNIKYDGGAETDPHWSPESRK
MIKSLGKLAFKQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCF
VHLSVQEFLAALHVHLTFINSGVNLLAEEQRTIRWSKVFRDKSTRFYQSAVDKALQSPNG
HLDLFLRFLLSLSLQTNQTLLRGLLTQNRSSSQTNQKTVEYIKKKINENLSAERSINLFH
CLNELNDCSLVEQIQQSLSSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSASEE
ALLRLLPVVRTSNKALLSGCNLSERSCEALSSVLSSQSSSLRELDLSNNELQDSGVKQLS
AGLKSPHCRLETLRLSACNLSERSCEALSSVLSSQSSSLRELDLSNNELQDSGVKKLSAG
LKSPHCRLETLRTDHGGLQWLRPGLRKYVCELELDTNTVHRNLKLSDNNRKVTHVGEDQS
YPDHPDRFDFCPELLCRNGLTGRSYWEVERRGRVHISVSYRGIRRRGGSEDCWFGGNDQS
WSLICSDDGYSVWHNNRRTVLTSSSVSNRVAVYVDCPAGSLSFYTVSSDSLIHLHTFNTT
FTLPLYPGFWVHSGSSVSLCPLQD
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatgtgctgatgaatgattggactgctgctctcagtgtttcctctccagat
gaaggtgtggactctgctatgagtccgtgtgaggacagagaggagggagtccctccctct
aaaaccactctgtgtggggaacatgacagccagaccaaagctcagagcccagagaagcag
cacagacctggacctggacctggacccagctgtgtgtccatgaagagtgaccggtctatg
ggttgttttaaaaacttcaaagatggacgccactctgttgatcaaagagtggaccaggag
agctcacaggttcccagtggtcagtctgcccagcagcatcaaagacacctggactccata
tttatgctgctgcaggaggacatcaacacttttgtgaagaacgagctgaagaagatccag
aaggttctgagtccagattacctagaatgcttaaagagtcagagggaggatgaggaggtg
ttggacaatgaggatgaagagcagaggaggagcagcagagaggcatttctgaagatcaca
ctgcacttcctgaggagaatgaagcaggaggagctggctgaccgtctgcagagcagaagt
cttactgcagttggtaaacgtaaacttaaatctaaccagcagaagaagttccagtgtgtg
tttgaggggattgctaaagcaggaaacccaacccttctgaatcagatgttcacagagatc
tacatcatagagggagggactgcagaggtcaatgatgaacatgaggtcagacagattgaa
acagcatccaggaaaccagacagaccagaaacaagaatcagacaagaagacatctttaaa
accccacctggaagagaagaaccaatcagaacagtgatgacaaagggagtggctggcatc
gggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccag
gacatccagttcacatttccattcactttcagagagctgaatgtgctgaaagaggaaaag
tacagcttggtggaacttgttgatcgcttctttagtgaaaccaaagaagcaggaatctgc
aggtttgaagaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggac
ttccacaacactgagatcctgactgatgttacagagtccacctcagtggatgtgctgctg
accaacctcatcagggggaaactgcttccctctgctcgcctctggataaccacacgacct
gcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtcagagggttc
actgacccacagaaggaggagtacttcaggaagagattcagagatgaggagcaggccagc
agaatcatctcccacatcaagacatcacgaagcctccacatcatgtgccacatcccagtc
ttctgctggatcactggtacagttctagaggacgtgttgaagaccagagagggaggagag
ctgcccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaag
aacatcaagtatgatggaggagctgagacagatccacactggagtccagagagcaggaag
atgatcaagtctctgggaaaactggcttttaagcagctgcagaaaggcaacctgatcttc
tatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtgtactcagga
gtgttcacacagatatttaaagaggagagaggactgtaccaggacaaggtgttctgcttc
gtccatctgagtgttcaggagtttctggctgctcttcatgtccatctgacattcatcaac
tctggagtcaacctgctggcagaagaacaaagaaccatccggtggtctaaagtgttcaga
gacaaatcaacacgtttctaccagagtgctgtggacaaggccttacagagtccaaatgga
cacctggacttgttcctccgcttcctcctgagtctttcactgcagaccaatcagaccctc
ctacgaggtctgctgacacagaatagaagtagctcacaaaccaatcagaaaacagtcgag
tacatcaagaagaaaatcaatgaaaatctgtctgcagagagaagcatcaatctgttccac
tgtctgaatgaactgaatgattgttctctagtggagcagatccaacagtccctgagttca
ggaagtctctccacagataaactgtctcctgctcagtggtcagctctggtcttcatctta
ctgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttcagaggag
gctcttctgaggctgctgccagtggtcagaacctccaacaaagctctgttgagtggctgt
aacctgtcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagt
ctgagagagctggacctgagtaacaacgagctgcaggattcaggagtgaagcagctgtcg
gctggactgaaaagtccacactgcagactggaaactctcagactgagtgcctgtaacctg
tcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgaga
gagctggacctgagtaacaatgagctgcaggattcaggagtgaagaagttgtcggctgga
ctgaagagtccacactgcagactggaaactctcaggacggaccatggtggattgcagtgg
ttgagacctggtctgagaaagtatgtctgtgaactggaactggacacaaacacagtacac
agaaacctcaaactgtctgacaacaacaggaaggtgacacatgtgggagaggatcagtca
tatcctgatcatccagacagatttgacttctgtcctgagctgttgtgtagaaatggtctg
actggtcgctcttactgggaggttgagaggagaggaagggttcatatatcagtgagttac
agaggaatcaggaggagaggaggcagtgaagactgttggtttggagggaatgatcagtcc
tggagtctgatctgctctgatgatggttactctgtctggcacaataacagaagaacagtc
ctcacttcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggctct
ctgtccttctacacagtctcctctgactcactgatccacctccacaccttcaacaccaca
ttcactcttcctctttatcctggattttgggttcactctggttcctcagtgtctctgtgt
cctctgcaggactga
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integrated database retrieval system
