Sander lucioperca (pikeperch): 116055220
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Entry
116055220 CDS
T07345
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116055220 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116055220 (rubcn)
Membrane trafficking [BR:
sluc04131
]
Autophagy
Other autophagy associated proteins
Others
116055220 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
CMD
RecO_C
Motif
Other DBs
NCBI-GeneID:
116055220
NCBI-ProteinID:
XP_035863113
Ensembl:
ENSSLUG00000026042
LinkDB
All DBs
Position
11:complement(3185457..3218948)
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AA seq
985 aa
AA seq
DB search
MEISAEGEAEECRREHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHRL
KNEQVYYKQRDYWPFVWCVRYISPHLASHVEQFSHLEPVLSSAMQSAGESYKAERWLLHS
LQVHMLSAQLRPLLRHLGHTRKYYNDDAFLLSEPHVIAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKGPPCLGLLKSQSLCVLPGVGGAWRNADSAPRGESLNRRLTTSNCSLREAVTTSN
NSGNTTGVESQNSKSTSEERAESDKYTTSPASSPGAPWICVSQPGESERGVTPNPGSVSV
HCISLTESPLSTTFQPEAGDSGEGEYDDGPEYLAIGNLGQRSRCDSQSSTHSSEQGVPLE
QSMHQSSIAPPPPRRSSFSEGQRGAGRGSRAHTRSFSDTGVNQKLRNGGGHRKITIIIED
PVAESAVDDCCVKNYSPFSPQRKDASTPSSLYMESHGSQYSSSVTDGMFRKPSEGQSLIS
YLSEQDFGSCADLEKENAHFSISESLIAAIELMKYNLRRQEEEGEEEGDSDCEIQQLKQK
IRLRRQLIRRSRLPPCATSQHLFHSTDSGCSRRSSQDSCEGLSDSGSAEEVEECELRDGC
EGQSLLAVSQNGLSLSLASLFSDADIKRRVSSSSRSFLSSESISPSFLQSNSAESVAMGL
LRQFEGMQLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEW
APPRPQIIFNIHSTPKRKIVVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHEN
AQAVVPGRVLRKWDFSKYYVSNFARDLLSKITGDPLFNPNDINSGLYKKIKALEAVRVLR
VQLFHMKNLFKTCRFAKEVLDQFDSLPGHLTEDLHLFSLSDLTAVRNGELAPRMKELLKL
GTTHVAGCVLCQAKGFVCEFCGNDKDIIFPFQLNKCQRCEECHACYHRSCFRTGKDCPRC
RRLAERRERMARKNMEEQEDEGGGP
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggagatatcggcggagggagaggcggaggagtgcaggagggagcactggaagctactg
tccagcctgaagaccacagtggagggtcttgtgtccaccaacaaccccaacgtgtggtca
cgttacggcggcctgcagcggctccacaaggacatgaacaacatcctgagccataggctg
aaaaatgagcaggtgtactacaaacagagagactattggccgtttgtgtggtgtgttcgc
tacatcagcccccacctcgcctcacacgttgaacagttcagtcacctggagccggtgctg
agcagcgcgatgcagagtgctggtgagagctacaaggctgagcgttggcttcttcacagc
ttacaggttcacatgctttcggctcagctccgacctctgctccgacatctggggcataca
cgtaaatactataatgacgatgcctttctgctgagcgagcctcatgtgatcgccatgttc
cagtgtctggaagcagtagagcagaataaccccaaactgctggcccaagtagacactgtc
gggctgtcccctctgaagggcccaccatgtctgggcctattgaagagccagagcctgtgt
gtgttgccaggggttggtggtgcttggaggaacgctgactcggctcccagaggagaatct
ctaaatcgcagactcaccacctctaactgctccctccgagaagcagtcaccactagcaac
aactctgggaacactacgggagtcgaatcccaaaacagcaaaagcacaagtgaggaaagg
gcggagagtgacaagtacactacctctccagccagcagccctggagctccctggatatgt
gtgtcccagccgggggaaagcgagcggggtgtgacacccaatcctggctctgtctcagtc
cattgcatctccctcacagagtctcccttgtccaccacctttcagcctgaggccggggac
tctggtgaaggcgaatatgacgatggtccggagtacttggctattggtaatctagggcag
cgcagccgctgtgactctcaaagctccacccacagcagtgagcagggcgtccccctggag
cagtccatgcaccagagttccatagccccgcccccacccagacgctcatctttctcagag
ggtcagaggggggcggggcgggggtcccgagcacacacccgctcgttttctgacacagga
gtcaatcagaaactcaggaacggagggggccatcgaaaaatcaccataataatagaagat
ccggtagcagaatcagcagttgatgattgctgtgtaaagaactacagccctttctcacct
cagcgcaaggatgccagcacccctagttccctctacatggagtctcacgggtcccagtac
agcagcagcgttacagatgggatgttcaggaagccgtcagagggtcagagcctcatcagc
tacctgtcggagcaggactttggcagctgtgctgaccttgagaaggagaatgctcatttc
agcatttcagagtcccttatcgctgccatcgagctgatgaagtacaacctgcggcgtcag
gaggaggagggcgaggaggagggagacagcgactgtgagattcagcaactcaaacagaag
atccgcctgcggaggcagctgatccgacgcagccgcctgccgccctgcgcaacctcccag
caccttttccactccactgacagcggatgctcccggaggagctctcaggactcctgtgag
ggcctgtctgactccggctcagctgaggaggtggaggagtgtgaactacgagatggctgt
gagggtcagtccctgttggcggtgtctcagaacggcctctccctgtcactcgcctccctc
ttctcagatgcagacatcaagcgcagggtaagctccagcagcaggtcttttctcagctca
gagtccatctctccatccttcctccagtctaactcggctgagtcagtagccatgggttta
ctcaggcaatttgagggcatgcagcttcctgcagcctcggagctcgactggctggtccca
gaacacgacgctccacagaagctgctgcccatccctgattctctgccgatctcgcctgat
gatggcgaacacgcagacatctacaagctgaggattcgggtccgaggcaacctggagtgg
gcgccgccccgaccgcagatcatcttcaacattcattccacccccaagaggaagatagtt
gtggctaaacagaactaccgctgcgctggctgtggcacccgcatcgacccagattatatc
aagcgactgcgttactgtgaatacctcggccgttacttctgccagtgttgccatgagaac
gcgcaggcggtggttcccggacgagtgctgaggaagtgggactttagcaagtactatgtc
agcaactttgcccgggacctgctgagcaagattactggtgacccactgttcaaccccaat
gacataaacagtggcctgtacaagaagatcaaagctctggaggctgtcagggttttgagg
gtgcagctgtttcatatgaaaaatctcttcaagacctgtcgctttgctaaagaggtgttg
gaccagttcgacagcctgccaggtcacctcacagaggaccttcacctcttctccctcagt
gacctcactgctgtgcgcaacggggaactggctccccgaatgaaagagctgcttaaactt
ggtaccacgcacgtagctggctgtgtgctttgccaggcgaagggcttcgtgtgcgagttt
tgcggcaacgacaaagacatcatcttccccttccagctgaacaagtgccagcgctgcgaa
gaatgtcatgcctgttaccatcgcagctgcttccggacgggtaaagactgtcctcgatgt
cggcggctggcagagcggagagagaggatggcgcgcaaaaacatggaggaacaagaagac
gagggaggtgggccctag
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