Sander lucioperca (pikeperch): 116055307
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Entry
116055307 CDS
T07345
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116055307
04020 Calcium signaling pathway
116055307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116055307
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116055307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116055307
NCBI-ProteinID:
XP_031163079
LinkDB
All DBs
Position
11:6929591..7029238
Genome browser
AA seq
2550 aa
AA seq
DB search
MLEPDSCLVSSQSLTRSHNALGLPRAPSGLECPGEGLGMEAMCGSSTPRHHILYSSPTDC
ETWQKHRAELAEGSSLLSESHSLLEPQSLSTSYDTLYLPHMSGQAPPLHPNRLGLSLDVA
STFEVGGGMLGVDGDLAVSPNVMKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWEMAR
FGDDVPGLLSPGDGGSDRNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCF
TVNRSLFIFGEDNVVRKYAKKIIEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKR
LEKTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNIS
VDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFY
SGKLHYTCTPQPGILENETVDSSEYEVPCGVRQCPAKYTCGDTWIGPNDGITQFDNILFA
VLTVFQCITMEGWTTVLYNTDDALGPNWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKER
ERVENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENKNSGPSALDALRSLPEWST
GGAYVLKRATTIKRRGMDVVHRGQPGEEQYSDISSVGIPMARASIRSAKRGPTAYFRRKE
RLLRISIRRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPLWLSNFLYYAEFLFLALFLTE
MFLKMYSLGPRLYFHSSFNRFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKI
TKYWASLRNLVVSLMNSMKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTF
PAAIMTVFQILTGEDWNEVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEAEAAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRS
RPTYSCSLDEGSIREGRPPPPLNPSTSFMSRRERRTRMTMSVWEQRTSQLRRHRQMSSRE
ILFSSPNEEKDGPPASAQAQHGQPQSLHRKAMEHTQSGSLKHLTDPLASPSKNQALGSSM
SVNMALDAALSGHIPELPVVLVPESLDPTNVPLPDASVSVAIPEPPESDSITESRKLAVN
QSHNTVSERRSPRLNGERQHRAVKKFRPPDNLDTLTPEMGGHGGIRGRRALHHCDHHSGA
RSQGSSPSGNGSHLASRSVSRERRRNPGNMVEKEAETKKVEEVSKPDESRQGDRSGGDTD
PPENQSHTGDQCPQKQEEPPQQSDPSPPVIPESNKEEKETEQDHDKCQLSSSVIIEVPNV
QSSLELSTITVNIKDPETCKPEKEEAEETKPVNTVTPDSMFIFKPDNPVRRACHYVVNLR
YFEMSILLVIAASSIALAAEDPVATSSNWNKVLRYFDYVFTGVFTFEMIIKMIDQGLLLH
DGSYFRDLWNILDFIVVVGALVAFALSNVMGNNKGRDIKTIKSLRVLRVLRPLKTIKRLP
KLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKDCQGYY
IDYGKDKKEVKRRDWKRHEFHYDNVIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSH
GNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAIGA
KPLTRYMPQNRHTVQYRLWHFVVSPSFEYTVLAMIALNTIVLMMKYYSAPPAYEAVLKHL
NTAFTVLFSVECVLKIMAFGFLNYFRDTWNIFDFITVLGSITEIVVDLQFVDTFNMSFLK
LFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNE
ETHITQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQKCETDTSLPPAVPTSDQEGG
CGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDR
AACGRIHYNDMYEMLTNMSPPLGLGKKCPSKVAYKRLVLMNMPVDDDMSVHFTSTLMALI
RTALEVKIARGGEDRNQMDLDLQKEIGVIWPHLSQKTLDLLVPIHKASDMTIGKIYAAMM
IMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNAKSLSFLRHSAGSALTRGG
FLALSPISPQEMFLQPLSRSREETEEGEDDGDYRSPYHPYHHPHHQHHHLQTLVPDVVEY
NQVMQQARQDATVIKSPQRTASIRASSMPRLAVDPPPGMSADSKLIKRSFSTIGDQCVNG
LWQEQHSLERVSPDGSYRPRQRSYRGPRVNHKETSSHERGRSKERRHLLSPDVSRCNSEE
RSRDPSCERRRSRSPSEGSTHTLQRQVNTTGSPAHSASDSSTPRNRRQLPQTPSRPRPFI
SYSPLVCQAHTSPAPAASSEGQPQPQDGAGGSTETLWRADKEGGPLTAGQGSFGVQVSGP
SNPSPHRYISEPYLPFHDDGSGGEAGDGQETLTFETAIATSLGRANAISSAPQLRHSWQV
PNGHFRKHLGQASPARASELLSDTDEDDRC
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaccggactcctgtttggtcagctctcagtctctgactaggagtcacaatgct
ttggggctacctagagccccgtcagggttggagtgtccaggggaaggtctgggcatggag
gcgatgtgtggtagcagcaccccgaggcaccacatcctttactcgtccccaacggactgt
gagacctggcagaagcatcgtgcagagctagctgaagggtcaagcctgttgtctgagtcc
cactccctgttggagccccaaagtctctcaaccagctatgacaccctctacctcccacac
atgtctggccaggctccccctctacatcctaaccgtcttggcctctctcttgatgtggcc
tcgacgtttgaagtcggagggggaatgctgggtgtggatggagatttggcggtcagtccc
aatgtgatgaagagacgtcggggcggcctgattgagcagagggacattgtcaaagcccac
caggctcataagattcacagcacaccacaggcacgacgcaaggagtgggaaatggcccgg
tttggagacgacgtcccgggcttgttgagcccaggggatggagggtccgatcgcaaccgg
aaccgcgatggggcggccgtgtccacaggtggcatctccccagcctttaagcagaccaaa
gcgcagcgtgctcgcaccatggccttgtacaaccccatcccggtcagggagaactgcttc
accgtcaacaggtccctcttcatctttggcgaggacaacgtggtcaggaagtacgctaag
aaaatcattgagtggcctccatttgaatacatgatcctcaccaccatcatcgccaactgt
atcgtcttggctctggagcagcaccttcctggagaggacaaaacgcccatgtctaagaga
ctggagaagacagagccctacttcatcgggatgttctgttttgaggctgggataaagatc
atcgccctgggctttgtttttcataaaggctcctacctcaggaacggatggaacgtcatg
gacttcattgtggtcctcagtgggatccttgccgcagcaggggcacatatgaacatctca
gtggacctgaggaccctgagggcggtgcgagtgctccgacccctcaaactggtctcaggc
atccccagtctccagattgtcctgaagtctataatgaaggccatggttcctctgctgcag
atcggcctgctgctcttttttgccatcctcatgtttgccatcatcggcctggagttttac
agcggcaaactgcactacacctgcacgccacagcctggaatactggaaaacgagacagtg
gactcttctgagtacgaggtcccgtgtggcgtgcgtcagtgtcctgccaaatacacttgc
ggcgatacttggattggccctaatgacggcatcactcagtttgacaacatcctgtttgct
gtcctcactgtcttccagtgcatcaccatggagggatggaccactgtactctacaatacc
gacgatgccttgggccccaactggaactggctctacttcatccctctcatcatcatcggc
tctttctttgtcctgaacctggtcctgggagtcctttctggggaatttgccaaggagagg
gagagggtggaaaaccgcagggccttcatgaaactgagacgccaacagcagattgagaga
gagctcaacggctaccgggcctggatcgacagagcagaggaagtgatgctcgcagaggag
aataagaattcaggaccttctgcccttgatgctctcaggagcctcccagagtggagtaca
ggtggtgcttatgtgttaaagagagccaccaccatcaagaggagagggatggatgtggtg
catcgagggcaaccaggggaggaacaatatagtgacatttcctctgtgggcatccccatg
gccagagcaagtatcaggagtgccaagcgaggtccaacagcgtattttcgtcgtaaggag
cgtctcctgcgcatctccatccgccgcgtggtgaagacgcacactttctactggacagtg
ctgggcctagtggctctcaacacactgtgtgtggccattgttcaccacaaccagcccctc
tggctgtccaacttcctctactatgcagagttcctgttcctcgctctgtttctgactgag
atgtttctgaagatgtacagcttggggccgcgtctctacttccattcctccttcaaccgc
tttgactgcagtgtgatcgttggcagcatctttgaagtgctgtggggtttcttcaggcct
ggcacttcctttggcatcagtgtcctgcgtgctctccgtctgctaaggatcttcaagatc
accaagtattgggcgtctctgagaaacctggtcgtctctctgatgaactccatgaagtcc
atcatctccctcatcttcctcctctttctcttcatcgttgtctttgcactccttggcatg
cagctcttcggtggcaggttcatctttgaagactacaccccgacaaactttgacacattt
cctgcagcaatcatgaccgtctttcagatcctgactggagaggactggaatgaggtgatg
tacaacggtattcgctctcaaggaggagtgaagtctggcatgtggtcctctatctacttt
atagtgctaacactgttcggaaactacacactgctgaatgtcttcttggccattgctgtg
gataaccttgccaatgcacaagaacttaccaaggatgaagaggaagcagaggcagcattc
aatcagaagcatgctctccagaaggcgaaggaggtcggaccgttgtcgtccttcatgtct
tcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatccaccgcagc
cggcctacctactcctgctccctggacgagggcagcatcagggagggccgcccaccccca
ccactcaacccctctacttctttcatgtccaggagagagagaagaacaaggatgaccatg
tcagtgtgggagcagaggactagccagctgcggagacaccgccagatgtccagccgagag
atcctgttcagcagtcccaacgaggagaaggacgggcctcctgcttcagcccaggcccag
catggacagccccagtcactgcaccgcaaggccatggagcacacacagtctgggagtttg
aagcacctgacggaccccttagcctccccatccaagaatcaggctttaggctcctccatg
tctgtgaatatggccctggatgccgccctttctggccacataccagaactcccagtggtt
ctggtaccagaatcattggatcctacgaacgtgccccttcccgatgcttctgtgtctgtg
gccataccagaacctcctgaatccgactccatcacagagagcagaaaactggctgttaat
cagagtcacaacaccgtcagcgagcgtcggagccccagattgaatggcgagcgtcaacac
agggcagtaaagaagttcagaccaccagataaccttgacacactgactcctgagatgggc
ggtcatggtgggatcaggggcagaagggcgctacatcactgtgaccatcacagcggggcc
agaagtcaagggtcatcaccatcggggaatggaagccacttggcgagtcgctcggtcagc
agagagaggaggagaaatccggggaacatggtggagaaggaggcagagaccaaaaaggtg
gaagaggtgtccaaacctgatgagagcagacagggtgacaggagtggaggagacactgac
ccaccagaaaaccagagccacactggtgaccagtgtcctcagaagcaggaagaacctcct
cagcaatcagacccgtctcctcctgtcatcccagagagcaacaaagaagagaaggagaca
gagcaggaccacgacaaatgtcagcttagctccagtgtgatcatcgaggtgccaaacgtt
cagtcatctctagagctctccacgatcacagtcaacataaaggaccctgaaacctgtaaa
ccagagaaggaggaggcagaggagacaaagcctgtcaacactgtgactccagacagcatg
ttcatcttcaaacctgacaacccggttcgtcgagcgtgtcactacgtggtgaacctcagg
tactttgaaatgtccatcctgctggtcatagctgctagtagtatagcactggctgctgag
gaccctgtagccacctcctctaactggaataaggttctgcggtattttgattatgtgttc
accggagtcttcacatttgaaatgattataaagatgattgaccagggtctgctcctccat
gacggctcctacttcagagacctgtggaacatcctcgactttatagtcgtggtgggagca
ttggtggccttcgccctctccaatgtgatgggaaataacaaaggacgggacattaagacc
atcaagtctctaagagtgttgcgtgtcctcagaccgctaaagaccatcaagagacttcct
aaactcaaggcggtgtttgactgtgtagtgacgtctctgaaaaatgtcttcaacatcctg
atagtctacaagcttttcatgttcatctttgccgtcatcgctgtgcagctcttcaagggg
aagtttttctactgtacagacagttccaaggacacagaaaaggattgccagggttactac
attgactatgggaaggataagaaagaggtgaagagaagagactggaagagacacgagttt
cactatgacaacgtcatctgggctctgctcactctcttcactgtttccactggagaggga
tggcctcaggttctgcagcactcagtagatgtgacagaggaggacaggggtccgagccac
ggcaacaggatggagatgtctatcttctatgtcatctactttgtcgtctttccttttttc
tttgtcaacatcttcgtggctctcatcatcatcaccttccaggaacagggggataagatg
atggaggagtgcagcctggaaaagaatgagagggcgtgcatagactttgccatcggtgcc
aagcccctgactcgttacatgccccagaacaggcacacggtccaataccgtctgtggcat
tttgtggtgtcgccttcttttgagtacactgtcctggccatgatcgctctcaacaccatt
gtacttatgatgaagtattactctgccccgccggcatacgaggccgtactgaagcacctg
aacacagctttcactgttctcttctctgttgagtgcgtcctcaagatcatggccttcggc
tttctgaattactttcgagacacatggaacatttttgacttcatcactgttttgggcagc
atcacagagatcgtggtagacttgcagtttgttgatacgttcaacatgagtttcttgaag
ctgttccgagctgctcgtctgatcaaactgctccgacaaggttacaccatccgcattctt
ctgtggaccttcgtccagtccttcaaggctttgccctacgtctgcctgctcatcgccatg
ctttttttcatctacgccatcattggcatgcaggtgtttgggaacattaagctaaatgag
gagactcacattacgcagcacaacaacttcaagaccttctctggtgctctgatgctgctg
ttcaggagtgccacaggggagtcatggcaggagatcatgttgtcgtgtctggggggacag
aagtgtgagacggacacctcgcttcccccagcagtaccgacgtccgaccaggaggggggc
tgtggctccgacttcgcctatttctactttgtctcgttcatcttcttcagctccttcctg
atgctgaacctgtttgtggctgtgatcatggataactttgagtatctgacgagagactcg
tccatcttgggtcctcaccacctggatgagtttgtccggatctggggggagtatgaccgt
gctgcctgtggtcgtatccattacaatgacatgtatgagatgttgaccaacatgtcgcca
cctctaggcctgggcaagaaatgcccctccaaggtggcatataagagactagtcctgatg
aacatgcctgtggacgatgacatgtctgttcacttcacctccaccctcatggccctcatc
cgcaccgccctggaggtcaagatagcccgaggaggggaggatagaaatcagatggacctg
gacttacagaaggagatcggtgtcatctggcctcatctctctcagaagacgttggacctg
ctggttcccattcacaaagccagtgacatgacaattgggaagatctatgccgccatgatg
atcatggactattacaagcagagcaaagccaagaagctccgacagcaactggaggaacag
aaacatgctcctatgttccagcgtatggatgcctcctctctgcctcaagaaatcctatgc
aatgccaaatccctttcattcctcaggcacagtgccggatctgctctcaccagaggaggt
tttctggcactcagccctatctctccacaagagatgttcctgcagccgctgtcccgctcc
agggaggagacggaggagggggaggatgacggcgactatcgttcaccctaccacccctac
catcacccgcatcaccagcaccatcatttacaaacactggtgccagacgtagtggagtat
aaccaagtgatgcagcaggccaggcaggacgcaacagttattaaatcacctcagcgcaca
gcatctatcagagcttcctccatgcccagactggctgttgatccaccgcctgggatgtca
gcagacagtaagctgataaagcgctccttctccaccatcggagaccagtgtgtgaacggc
ctctggcaggagcagcactctctggagagagtcagtcctgacggctcatacaggcctcgt
cagaggagctacagaggtccaagagtcaaccacaaagaaacaagcagtcatgagagaggg
cgatctaaggaacggcgccacctactgtctcctgacgtgtcccgctgcaattctgaggag
cgcagccgcgatccatcgtgtgaaaggagacggtcccgttcacctagcgaaggaagcaca
cacaccttacagagacaggtaaacacaacaggcagccctgcccattcagcctcagactcc
agcactcctcgtaatcggcgccagctaccacagacaccctcccggcctcggccgttcatc
tcctactcccctctggtctgccaagcccacacctctccagcaccagcagcctcctctgag
ggacagccccagcctcaggatggcgctggtggctccacagagaccttgtggagggctgac
aaggagggcggccccctaactgcaggtcaagggtcattcggagtacaggtttcaggaccc
agcaacccatctcctcaccgctacatctcagagccctacctgccattccatgacgacggc
agcggtggagaggcaggcgacgggcaggagacccttacttttgagactgccatagcaacc
agcctgggacgggccaacgccataagctccgctcctcagctcagacactcttggcaagtt
cctaatggccatttccgaaagcacttgggccaagcgagtccggctcgagccagcgagctg
ctaagtgacacagacgaggacgaccgctgctaa
DBGET
integrated database retrieval system