Sander lucioperca (pikeperch): 116055323
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Entry
116055323 CDS
T07345
Symbol
sorcs3b
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116055323 (sorcs3b)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Others
Others
116055323 (sorcs3b)
Endosome - Lysosome transport
116055323 (sorcs3b)
Endosome - Golgi transport
116055323 (sorcs3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
116055323
NCBI-ProteinID:
XP_031163114
Ensembl:
ENSSLUG00000019646
LinkDB
All DBs
Position
15:22641463..22685999
Genome browser
AA seq
1246 aa
AA seq
DB search
MGLWSFWSFSLLAFVFLYPFHPKFVAQAEISSSRANDRFHRVDVTLLEARVTRESTVVKV
DNSSKVLSAFKSEASGALNPNNGKQVGNETQSGLGNEALFGNKTAPNCRNRLKIPGKKCG
NISEDSQRRPTAKIMLENRFPDTRNRVKRSAGTTYTEHVERSISGDAQSRERFVETVQGV
SNSRPEYRRTGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKL
YDFNLGAVTESSLWRSSDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESA
VLISSDEGASFEKHPINFNILSLLFHPAQENWILAYSHDNKLYSSMDFGRKWQLVHDNVM
PGRFYWAVMGLDRESDVVHIETRIAKGRAQYVKCRAQRCTEGNRLYLFPGHVDTNSLVVQ
DEYVFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEWNQNN
TYSLYISDSPGVYFTLSLENLRTSRGPAGNLLVDFYKVEGINGMYLANKLLDNHIKTFIT
YNKGQTWALLPAPAADVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVAT
GNIGKELSSTNLGMFITSDAGNSWRQIFDEEHNVWFLDNGGALLAVLHAAKPIRHLWISL
DEGKKWDRHSFSLAHLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFSRRCM
DGDYQTWNLQNKGELCVMGEKQTYMKRRPGNRCMLAQDYSRISFSEPCPCTAYDFECDYG
WERQAGGKCSPAFWFNPNGVAKSCSTSQSFLNSTGYRKVLSNNCKEEGRNVYSPKRQLCR
PRPPRGLRLSTNQGELSATVGSNVTFMVYLDDGDSLRTSIQLDFGDGIKITYSNLSRTDD
GINHIYRTTGIYRVTASAENNQGSDSSTLFLHITSPVERVYLSAPIVAIRGKKVNLTVVV
WPSHTRTLAFFWWFDNSSEPIITLEGSISYTFQREGKNKVTVQVASGSTIMQDSKVITVK
EFFRSLLLSFSPALDEHNPDIPEWREDIGRLVRTVLSQVSGVAEDQLLVSLYPGLPSTAE
LFILPDEQTSSEHKRGSEEALEMISHIFVTALNQGLIQFELKADIRIIVYMTQQTLAPLV
DSNSIHSGSAMLMLLTVVFVGIAAFFIYKFKRKIPWIHVETEDSHEKEPEVISTVGQNDN
MSKVKLSEFPSPKELMEKELEARSRGGIGRNMERIVTREFPNCTNV
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggtcattttggagtttttcccttttggctttcgtatttctgtatcccttc
caccccaagtttgtggctcaagcggaaataagttcttccagagcaaacgacagatttcat
cgcgtggatgtaacgctgctggaggcacgagtaacacgagaatcaacggtagtcaaagtc
gacaatagctcaaaagttttaagcgcttttaaatcggaagcatccggtgctttgaatccg
aacaatggtaagcaagtggggaatgaaacacagagtggacttggaaacgaggcactgttc
ggcaacaaaacggcaccaaactgtcggaatcgtctcaaaatacctggtaaaaagtgtggt
aacatatccgaggacagccaaaggcgacctacagcgaaaataatgttagaaaacagattt
cctgatacaagaaatagggtaaaaaggagtgctggtacaacatacaccgaacatgtggaa
aggagtataagtggagatgctcagtcaagagagaggtttgtggagactgtccaaggtgtt
tccaactcgagacccgagtaccggcgcactggggaggaagccagagggtctaacccgagg
cagagtgagccgcacctagacacttctacttttgctttatcgggagactcggcgcacaac
caggcgatggtgcactggtccggacacaacagcagcgtgatcctgatcttgactaagttg
tatgacttcaacctgggggctgttactgagagctcactctggagatcctctgattatgga
agcacctacaccaaactcaacgacaaagtgggctcaaggacagttttaagttacctgtac
gtctgccccaccaacaaacagaagataatgatgcttagcgacccagaggtagagagcgct
gttctcatcagttcagatgaaggggcaagctttgagaagcatcctattaacttcaatatc
ctgagcctgctcttccaccctgcacaggagaactggatactggcttacagtcatgacaac
aagctgtacagttcaatggactttgggaggaaatggcagcttgttcacgacaatgtgatg
ccaggacgattctactgggcggtaatggggctggacagagaatcagatgtggtccacatc
gagacgcgcatcgcaaaaggccgcgcccagtatgtgaagtgcagagcccaacgatgcaca
gaaggcaacagactgtacctctttcctggacatgtagacaccaactcactggttgtgcag
gatgaatacgttttcacacaggtaaccaagtcaggacgagccagctactttgtctcctac
atgagagaatccttcaagcggatgaaattacctaaatattgtctcccaaaggacatgcat
ataatcagtacagatgagaagcaggtatttgctgcagtccaggagtggaatcagaacaac
acctacagcctgtatatctcagactcccccggggtctacttcaccctttcattagagaac
ctgagaaccagcagaggacctgccggtaatctactggttgacttttataaggttgagggg
ataaatggcatgtatcttgccaacaaactgttggacaatcatatcaagactttcatcaca
tacaacaagggacaaacatgggccctgctgccagctcctgccgctgatgtggctggaaat
aaccttcactgcattctgccattttgttcgctgcatcttcatctggagatgtcggagaat
ccctacacgtctggacccatcaccagcaaaaagtctgtgccaggaatcattgtggctaca
gggaatatcggaaaagagctgtcctccactaaccttgggatgtttataacatctgatgca
ggaaatagctggagacagatttttgatgaagagcacaacgtttggtttcttgacaatgga
ggggctttgctggcagtcttacatgcagcgaagcctattcgacacttatggatcagtcta
gacgaaggaaaaaaatgggaccgtcatagtttctccttggcacatctgtatgtggatgga
gtgttaatggagccagaatctgacaatcacattatcactttctttggacacttcagtcat
cggtcggagtggcagctgatcaagatcgactacaagggcctctttagcaggagatgcatg
gatggagattatcaaacatggaacctgcaaaacaagggagagctgtgtgtgatgggtgag
aagcagacctatatgaagcgcagaccaggcaaccgttgcatgcttgcccaagactattcg
aggatctctttctcagagccatgcccctgcacagcctatgattttgaatgtgattatggg
tgggaacgccaggcaggcgggaagtgctcccctgctttttggtttaatccgaacggtgtg
gcgaaaagctgcagcaccagccaaagctttcttaacagcacagggtatcgaaaggttttg
tctaataactgtaaggaggaagggaggaacgtgtactcgcccaaaaggcagttgtgtcgt
cccagaccaccccgaggcctccggctgtccaccaatcaaggggagctcagcgccactgtt
ggaagcaacgttactttcatggtctaccttgatgatggagactcgctgaggaccagcatc
cagctagacttcggggacggcatcaagatcacgtactctaacctgagcaggacggatgat
ggcatcaaccacatctacagaacgactgggatttaccgagtgacagcttctgctgaaaac
aaccagggatctgacagcagcacactgtttttacacatcaccagtccagtggagcgtgta
tatctctctgctcctattgtagccatcagggggaagaaggttaatctgaccgtggtggtt
tggccgagtcacaccagaacattggccttcttctggtggtttgacaacagctccgagccc
attataaccttggagggaagcatctcatacacatttcagagagaaggaaaaaacaaggtc
acggtccaagttgcttctgggagcactataatgcaggattcaaaagttataactgttaaa
gagttcttcagatcgctgctgttgtcgttctcgccagctcttgatgagcacaatcctgac
atcccagagtggagggaggacatagggcggctggtgcggacagttctgtcacaggtgtct
ggtgttgctgaagatcagctgctggtgtctttgtatcctggacttccatctacagcagag
ctctttatcctgcctgatgagcaaacatcaagtgagcacaaaagagggagtgaggaggct
ctagagatgatatcgcatatttttgtcactgccctgaaccaaggcctgatccagtttgag
ctgaaagcggatattcgcattattgtgtacatgactcagcaaaccttggcaccacttgtg
gattcaaactccatccacagtgggtcggccatgctgatgctgctcaccgtggtgtttgtt
ggtatagcagcattcttcatctacaagttcaaaaggaaaatcccttggatccatgttgag
actgaggacagtcatgagaaggaaccggaggtgatcagtacagtcggtcagaacgacaac
atgtccaaggtcaagctcagtgagtttccttctccgaaggaactcatggaaaaggagctg
gaggctaggagcagaggaggaattggaagaaatatggagagaattgttacaagggaattc
ccaaactgtactaatgtgtaa
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