Sander lucioperca (pikeperch): 116055334
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Entry
116055334 CDS
T07345
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116055334
Membrane trafficking [BR:
sluc04131
]
Protein recycling
Others
Others
116055334
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BiPBP_C
AIF-1
Motif
Other DBs
NCBI-GeneID:
116055334
NCBI-ProteinID:
XP_031163133
Ensembl:
ENSSLUG00000019711
LinkDB
All DBs
Position
15:complement(22687593..22740520)
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AA seq
1252 aa
AA seq
DB search
MEKRLGHCLFIILSEWIWLFTLTSILGGTKAELRCIPSCQLPLITAFPRELSELDLTNFG
EAPVEELIGFTEGSPDTKPIAYGDERHNVAELTASEESSSKVQPRLGVHNTSCLKKDALN
GQQKLSHPKVFPGSASPAAVTSPSEANVTENSTGDGKKNSFYVENGAQVNVTVNEDTDVA
SWRRTRSARSAETWSELRPEGGEGASLSDQEEFELTSSTFALTGDTAHNQAMVHWSGQNS
SVILMLTKYYDFNSGKVTESSLWRSTDYGTTYEKFNEKVGPKTILSYLYVSPNNKRKIML
LTDPEVESSLLISLDEGATYQKHSLAFDILSLLFHPEQEDWILAYSHDQKLYVSVEFGRR
WQLVHDRVVPNRFYWSRLGLDKEQGMIHLEISVSDGRSQYITCKLQNCSDGNKGKPFPGF
IIPNSLVVQDEYVFIQVPVGGQSVHYVSYKRNSFYPMKLPKYTLPKDLQIISTDDNQVVA
AIQDWHQNDSYNLYMSESRGLFFTLMLENVVSSGGPEGNIMIDLYEVAGIKGVFLSNKVV
ENQVKTYITYNKGRDWRLLQAPTTDLQGNKVYCEPPDCSLHLHLHVSENPYTSGNIVSKD
SAPGIIIASGVVGPELTSNNVSIFITSDAGNSWREVFQEEYSVFFLNQGGSLVAIRHTPL
PIRHIWLSFDEGRNWDKYSFTSSPLYVDGVLGEPGEDTLIMTIFGHFSHRSEWQLVKIDF
RSIFQQQCTSEDYMTWQLHNEGEVCIMGMKRIFQKLKANILCVKARNQYISQMSDSCPCT
EADFECDYGFERQIDGSCTQAFWFVPSATSRDCITGDSFLNTTGYRRALSNNCTEVMLLK
YSPRRQKCPSQAPRGLQLFTSEGTLVATLERNVTFLVFLEEGLGSMTSITVDFGDGTSIS
YVNISSIDDGVKHIYSKVGIYQVSATATNTLGFDRVILYLHVSCQLEHVQLSAPSVVVKN
KAVNLTTVLRPSNVGTVTYYWWFNNKTEPVVTLDGAISFTFSKEGRHTVTVQASVGNTVH
QDQMTVAVYDYFRSHVLAFSSTLDELNPGVSEWREDIGRVVKSSMVQVTGINRDQLLVTV
LPGLPTTAEIFIVPEKRPRHGAMDEKWAHLDQLSQILLSALNQDLIQFTLKPGVQVNVLA
TQLSPAPLVDSGDSGHSSTAVIMLVSVVLMGLAVFVIYTFKRKIPGINTYTVEQPDKEQE
VIPPVTSIAIPNPEGDKLTSLDNVDVQLDSKGRGYLPSHTDIKLSDEAPHVF
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcgccttggtcactgcctttttatcattctctccgagtggatttggctcttc
accctaacttccatcctgggcggaacaaaagcggagttaaggtgcattccctcgtgccag
ctgccgctaattacagcatttcccagggaactctcggagctggatttgactaattttggc
gaggcaccagttgaagaattgattggttttacggaggggtcaccggacaccaaacccatc
gcctacggggacgaaaggcacaacgttgcggaattaaccgcgagcgaagaaagttcgtcc
aaagtgcaaccacgattaggggttcataacacaagttgtctcaaaaaggacgcgttgaac
ggacagcaaaaactttcccacccgaaagtgtttcctggaagtgcttcgcccgcggctgtc
acttctcccagtgaggctaacgtaaccgaaaatagcaccggtgatggaaaaaagaacagc
ttttacgttgaaaatggggcacaggttaatgtgacagtaaacgaggatacggatgtggcc
agctggagacgaacacggagtgcgaggagcgcagagacttggtctgaactcagacctgag
ggcggggagggcgcttcgttgtcggaccaggaggagtttgagctcacaagttcgacattc
gcactcaccggggacacggctcataaccaggcgatggtgcactggtccggacaaaacagc
agcgtgatcctcatgttgacaaagtactacgacttcaactctggcaaagtaacagagagt
tctttatggaggtcaactgattatgggaccacatatgagaaatttaatgagaaagtcggg
ccaaaaaccatcctgagctacttgtacgtgagtccgaacaacaaaaggaagatcatgtta
cttaccgacccggaggtggagagcagcctgctcattagccttgacgagggggcgacctat
cagaaacacagcctagcctttgatatcctcagtctgctttttcaccccgagcaggaggac
tggattctggcttacagccacgaccaaaagctctatgtctctgttgaatttgggaggaga
tggcagcttgtgcatgacagagtcgtccccaacagattctactggtccagactgggttta
gacaaagagcaaggaatgattcacctggagatcagcgtctctgatggacggtcacagtac
ataacttgtaaacttcagaattgctctgatggaaacaagggcaagcctttccctggattt
atcatccctaattccctggtggttcaggatgaatacgttttcatccaggtgccagtaggt
ggccagtctgtccattatgtgtcctataaaagaaattctttttacccaatgaagcttccc
aagtacactctgccaaaggacttgcagataatcagcacagatgacaaccaggtggtggca
gcgattcaggactggcatcagaatgactcctacaacctgtacatgtctgagtccagaggg
ctgttcttcaccctgatgctggaaaacgttgtgagcagtggaggaccggagggcaacatc
atgatagacctctatgaggttgctgggattaaaggggtgttcctgtcaaataaagttgtt
gagaaccaagtgaaaacttatatcacatacaacaaggggagagactggcgtcttcttcag
gctccaacaaccgatctccagggaaacaaggtctattgtgaaccacctgactgttcgttg
catctacaccttcatgtgtcagagaatccttacacctcgggaaacattgtcagcaaagat
tcagctccaggaattataatagcatcaggtgtagttggacctgagctgaccagtaataat
gtcagtattttcatcacatctgatgctggaaacagctggagagaggtttttcaggaagag
tacagcgtgtttttcctgaatcaaggagggtctctggtggccatccgacacacacctctg
ccaattagacacatttggctgagttttgatgagggcagaaactgggacaaatatagcttc
acctcctctccactctatgttgacggggtgctgggggagcctggagaggacaccctcata
atgacaatatttggccattttagtcatcgatctgagtggcaacttgtcaaaattgacttc
cggtccattttccaacaacaatgcacatctgaagattacatgacatggcagttacacaat
gagggcgaagtgtgcatcatgggaatgaagagaatcttccaaaaactgaaagcaaacatt
ctatgtgtcaaggccagaaatcagtatatttcccagatgtcagactcttgcccgtgcaca
gaggcagattttgagtgcgactacgggtttgagaggcagattgacggtagctgcactcag
gctttctggttcgttccttcagcaacatctcgagactgcatcacgggggacagcttcctc
aacaccacaggatatcgccgggctttgtctaacaactgcactgaggtaatgctgttgaag
tacagccccagacgacaaaaatgtcccagtcaggccccaaggggcctccagctcttcacc
agtgagggaacactggtagcaacactggagaggaatgtcactttcttggtctttctggaa
gagggtctcggctccatgacaagtataacagtagattttggcgacgggacatcaatatcg
tatgttaacataagctccatcgatgacggggtcaagcatatctacagtaaagttggcatc
taccaggtttctgctacagctaccaacactctgggctttgacagggtgatactctacctc
cacgtctcctgtcagcttgaacacgtccagctctcggctccttcggtagtcgtcaagaac
aaagcagtaaacctcacgacagtgttacgtcccagcaatgtgggaacagtcacctattac
tggtggtttaataacaaaacggagcctgttgtgactctggacggagcgatatccttcact
ttctccaaggagggacggcacactgtcactgttcaggcttcagttggcaatactgtccat
caggatcagatgactgtggctgtttatgattatttccggtcacacgttttggccttttct
tctactttggacgagctgaaccccggggtgtctgagtggagagaggacattggcagagtg
gtgaagagctccatggttcaggtcacaggaatcaaccgggatcagctcttggtcacagtg
cttccaggtttaccaacaacagcagagattttcattgtgcccgagaagaggccaagacac
ggagccatggatgaaaaatgggcacacctggatcagctttctcagattctgctaagtgct
ttgaaccaagacctcatccagttcacactcaaacctggggtgcaggtgaacgtgttagcc
acacaactatcaccagctcctcttgtagacagcggtgatagtggccacagcagcactgca
gtcatcatgctcgtgtcagtcgtactgatgggcttggctgtctttgtaatatatacgttt
aaaaggaagatcccgggcatcaacacatacacagtggagcagcctgacaaagaacaagag
gtcatcccgccagtgacctccatagccatcccaaaccctgagggggacaagctgacctca
ctggataatgtggatgtacagttggattcaaaaggcagaggctacctgccatctcacaca
gacatcaagctctctgatgaagcgccccatgtgttttaa
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