Sander lucioperca (pikeperch): 116055346
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Entry
116055346 CDS
T07345
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00260
Glycine, serine and threonine metabolism
sluc00270
Cysteine and methionine metabolism
sluc00450
Selenocompound metabolism
sluc00670
One carbon pool by folate
sluc01100
Metabolic pathways
sluc01230
Biosynthesis of amino acids
Module
sluc_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116055346 (cth)
00270 Cysteine and methionine metabolism
116055346 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
116055346 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116055346 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116055346 (cth)
Enzymes [BR:
sluc01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
116055346 (cth)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116055346 (cth)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-GeneID:
116055346
NCBI-ProteinID:
XP_031163150
Ensembl:
ENSSLUG00000025621
LinkDB
All DBs
Position
11:4047829..4059935
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AA seq
409 aa
AA seq
DB search
MDQNHKQDEQSDLFAGFSSAYKSFATEAIHVGQEPEQWKSMAVVPPISLSTTFKQLGPGN
HAGFEYSRSGNPTRNCLEKAVAALDGAKYSIAVASGLAATVTITHLLKAGDGIVCMDDVY
GGTNRYFQRIAVELGLKVSFADCTKPELLEAALKANTKLVWIETPTNPTMKVVDIKACSE
VAHKYNKDIVVVVDNTFMSAFFQRPLALGADICMYSATKYMNGHSDVVMGLASMNRDDLY
DRLKFLQNALGCVPSPFDCFLCNRGLKTLHLRMERHFRNAMAAAKFLEADPRVEQVLFPG
LPSHPQHEVMKRQCTGCPGMITFYIKGKLEHASTFLSNLKLFAIAESLGGYESLAEHPAI
MTHASVPENERRVLGITDTLIRLSVGLEDEADIIEDLEQALAAAHPKKK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaatcacaaacaagacgagcagagcgacttgttcgccggttttagctcggca
tataaatcgttcgccacagaggcaattcacgtcggccaggagccggagcaatggaaatca
atggctgtagtgccgccgatttccctatctaccacgttcaagcagctcggaccaggaaac
cacgccgggtttgaatacagccggagtggaaaccctacaagaaactgtcttgagaaggcg
gtggctgctttggatggagcaaagtatagcattgctgttgcctcgggcctggcagccaca
gtgaccatcactcacttgcttaaggcgggtgatggaattgtctgcatggacgatgtgtac
ggaggcacaaaccgctacttccaaagaattgccgttgaacttggtctgaaggtgtctttt
gctgactgtacaaaaccagagctgctggaggctgctctgaaggccaacactaaactggtg
tggattgagacacccaccaaccccacaatgaaggttgttgacatcaaggcctgttccgag
gtggcccataaatacaacaaagacatagtggtggtcgtggacaataccttcatgtctgcc
ttctttcagcgccccttggctttgggagctgatatctgcatgtattcagctaccaaatac
atgaacggtcacagtgacgtggtaatgggtctggcctcaatgaaccgggatgatctgtat
gatcgactgaagtttctgcaaaatgcactgggctgtgtaccatctcccttcgactgcttc
ctgtgtaaccgaggactgaagacactacacctgcgaatggagaggcactttaggaatgcc
atggctgccgccaagtttctggaggcggatcccagggtggagcaggtcctcttcccaggc
ctgccctctcacccccagcatgaagtgatgaaaagacaatgcaccggatgtccggggatg
ataaccttctacattaagggaaaactggagcacgccagcaccttcctcagtaacctcaaa
ttgtttgcgatagctgagagtctcggtggttatgaaagtttagcagaacatccggcgatt
atgacccatgcatcagtgccagaaaacgagaggagagtcctggggatcactgacacactc
atccgactctctgtgggtctggaggatgaggctgacatcattgaagacctggagcaagct
cttgctgctgctcatccaaagaagaagtga
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