KEGG   Sander lucioperca (pikeperch): 116055970
Entry
116055970         CDS       T07345                                 
Symbol
smg8
Name
(RefSeq) protein SMG8
  KO
K18734  protein SMG8
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116055970 (smg8)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     116055970 (smg8)
SSDB
Motif
Pfam: Smg8_Smg9 DUF2794
Other DBs
NCBI-GeneID: 116055970
NCBI-ProteinID: XP_031163914
Ensembl: ENSSLUG00000017861
LinkDB
Position
13:complement(30123960..30133102)
AA seq 923 aa
MKEVNMSFPVSMGALLKADLQEDAASRDEGLCVVGIFGKSNMQPGPPKESIINNLADKHI
FSLFGGPEDGGNADSHIQAFYSQENRVLYLLLSSVCDSRQLLRACESLSAATGHSDAHDF
WKGLDRQHCLHLLYMFSVCHVLLLVHPNQTFDVTYDRLFRALDALRQKVLPLIRAAIKDC
PVSKEWKVNCRPCPPRLLFVFQMNGSLKVAANGSESGGNPDKPKKHSPRRRLQHALEDQI
YRIFRKSRVLTNQSSNCLFTVPANQAFVYVIPAVDEDPVGALLGQLRSNCILCEQDTVTV
VSGPRRYQQMRRSVRQSSFSGDQGSMSMGGQLVDCSLKEFLWQHVELVLTKKGFDDSVGR
NPQPSHFELPTYSKWVQVASRLHQVLISNTEEELAELATKVQGQLKVLEAFLDADTKFSE
NRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYK
FWSNGHQLCEERSLTDQHCVHKFHLLPQPGEKPDLDRNPPIMNHNSRGRSTSSCNCGRKQ
APREDPFDIQAANYDFYQILEEKCCGKLERIEFPVFQPSTPDPAPACNQAQRLPSEASGS
GEAERLKEPSTAQSHTPGDPSLSLALSLGQSTDSLGPYADGDGTETQVQQKRPSLVDRQP
STVEYLPGMMHSGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLLPWDLV
IRSRSEEDTGLTEPLDGGTSSWPAPNKTLVGKRGSTGGLGRSRRRDDMARIFVGFEYEDS
RGRRFISCGPDKIVKVLGPGGAKEPATRVLNTDMPLNIQSPSQGRGLKPHFAQLARLFIV
VPDAPLEVTLNPQVLPGPPPCPVFHPEKTDIVLPPDGLWVLRFPYSYATDRGPCYPPKEN
QPLNNYKVLRGILKATTANPPPQ
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgaaggaagtaaacatgtccttccctgtgagtatgggggctctgcttaaggcagacctc
caggaggacgctgctagccgggacgagggcttgtgtgttgtcggtattttcggtaaaagc
aacatgcagcccggaccgccgaaggagtctattatcaacaatttggcggacaaacacatt
ttctcgctgttcggcggaccggaggacggcggcaacgcggacagccacatccaggctttc
tacagccaggagaaccgggtgctgtacctgctgctctcctccgtctgcgacagccggcag
ctgctgcgggcctgcgagtctctgagcgccgccaccggccactccgacgcccacgacttc
tggaaaggcctggacagacagcactgcctccatctgctctacatgttctccgtgtgccac
gtcctcctgctcgtccaccctaaccagaccttcgatgtgacctacgaccggctcttcaga
gccctggacgccctgcgacagaaggtgctgcctctgattcgagctgccatcaaagactgt
ccggtgtccaaagagtggaaggtgaactgtcggccctgccctccacgcctgctcttcgtc
ttccagatgaacggctctctgaaggtcgctgcaaacggttcagagtctgggggaaaccca
gacaagcccaaaaagcactctcccaggaggaggttgcagcatgccctggaggaccaaatt
tatcggatcttccgtaaaagcagagtcctgaccaaccagagcagcaactgcttgtttact
gtgcccgccaaccaagcgtttgtgtacgtcataccggcagtagacgaggaccctgtgggt
gccctgcttggtcagctgcggtccaactgcatcttgtgtgaacaagacaccgtcacggtg
gtgtcaggaccgaggcgttatcagcagatgcgacgttcagttcggcagtccagcttcagc
ggagaccaaggcagcatgtcgatgggcggtcagctggtggactgcagcctgaaggaattc
ctctggcagcacgtggagctggtgctcaccaagaaaggctttgacgacagcgtcggccgc
aacccacaaccttcccactttgagctgccgacctactccaaatgggtccaggtcgcctcc
aggctccaccaagtcctgattagcaacacagaagaagaattagccgagctagccacgaaa
gtgcaaggccagctgaaggttttggaggcttttcttgatgctgacacaaagttctctgag
aacaggtgccagaaagctctgccactggctcacagcgcttaccagtccaaccttccccat
aactacaccaccacagtgcacaaaaaccagctggcgcaggctctgcgggtgtacagccag
catgcccgaggagtcgctttccagcgctacgcactgcagcttcatgaggactgctacaag
ttctggagcaacggccaccagctgtgtgaggagcgaagcctgactgaccaacactgtgtt
cacaagttccacctgctgcctcagccaggagagaagccagatctggatcgcaatccacca
atcatgaaccacaacagcagggggcgctccaccagctcctgtaactgcggcaggaaacag
gctcctcgtgaggatccgtttgacatccaggctgccaattatgacttctaccagatactg
gaggagaaatgctgcgggaagctggagaggattgagtttccggtgttccagcccagcact
cctgacccagctccggcctgcaaccaagctcagcgactcccaagtgaggcctcagggtct
ggtgaggcagagaggctgaaggagccaagcactgctcagagccacacacctggagacccc
agcctcagcctggctctcagtctaggccagtccacagacagcctggggccctacgcggat
ggagatggcaccgaaacccaagtccagcaaaagaggccaagccttgttgaccgccagccc
tccactgtggagtatctcccgggtatgatgcactctggctgccccaagggcctgctaccc
aagttttccagctggtcgctggtcaaactgggcccagccaagtcatacaactgccacacc
ggtctggaacagccaggcttcttacctggctcctccttcctcttaccgtgggacttggtg
atccgctctcggtcggaggaggacaccggactgacggagcctttggatggaggcacctcc
tcgtggccagccccaaacaagaccctggtgggaaagcgagggagcaccggagggctcggt
aggagtcgcaggagggatgacatggctcggatattcgtggggtttgagtatgaagacagc
agaggaagacgcttcatcagctgcgggccggataagatagtgaaggtgctgggaccaggg
ggcgccaaagaacctgccaccagggtgctaaacaccgacatgccgctgaacatccagtcc
ccttcacagggccgcggcctgaagcctcactttgcccagctggctcgcctttttattgtg
gtgccggacgccccactggaggttaccctcaacccacaggtactgcccggtcctcctccc
tgcccagttttccacccagagaagacagatatagtgttgccacctgatggtctttgggtt
ctgcggttcccttattcctacgcaacagatcgcggtccctgttacccccccaaagagaac
caaccactcaacaactacaaggtgctgcgaggcatcctgaaggccacgactgctaaccct
ccaccacagtaa

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