Sander lucioperca (pikeperch): 116055970
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Entry
116055970 CDS
T07345
Symbol
smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116055970 (smg8)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116055970 (smg8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
116055970
NCBI-ProteinID:
XP_031163914
Ensembl:
ENSSLUG00000017861
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Position
13:complement(30123960..30133102)
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AA seq
923 aa
AA seq
DB search
MKEVNMSFPVSMGALLKADLQEDAASRDEGLCVVGIFGKSNMQPGPPKESIINNLADKHI
FSLFGGPEDGGNADSHIQAFYSQENRVLYLLLSSVCDSRQLLRACESLSAATGHSDAHDF
WKGLDRQHCLHLLYMFSVCHVLLLVHPNQTFDVTYDRLFRALDALRQKVLPLIRAAIKDC
PVSKEWKVNCRPCPPRLLFVFQMNGSLKVAANGSESGGNPDKPKKHSPRRRLQHALEDQI
YRIFRKSRVLTNQSSNCLFTVPANQAFVYVIPAVDEDPVGALLGQLRSNCILCEQDTVTV
VSGPRRYQQMRRSVRQSSFSGDQGSMSMGGQLVDCSLKEFLWQHVELVLTKKGFDDSVGR
NPQPSHFELPTYSKWVQVASRLHQVLISNTEEELAELATKVQGQLKVLEAFLDADTKFSE
NRCQKALPLAHSAYQSNLPHNYTTTVHKNQLAQALRVYSQHARGVAFQRYALQLHEDCYK
FWSNGHQLCEERSLTDQHCVHKFHLLPQPGEKPDLDRNPPIMNHNSRGRSTSSCNCGRKQ
APREDPFDIQAANYDFYQILEEKCCGKLERIEFPVFQPSTPDPAPACNQAQRLPSEASGS
GEAERLKEPSTAQSHTPGDPSLSLALSLGQSTDSLGPYADGDGTETQVQQKRPSLVDRQP
STVEYLPGMMHSGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLLPWDLV
IRSRSEEDTGLTEPLDGGTSSWPAPNKTLVGKRGSTGGLGRSRRRDDMARIFVGFEYEDS
RGRRFISCGPDKIVKVLGPGGAKEPATRVLNTDMPLNIQSPSQGRGLKPHFAQLARLFIV
VPDAPLEVTLNPQVLPGPPPCPVFHPEKTDIVLPPDGLWVLRFPYSYATDRGPCYPPKEN
QPLNNYKVLRGILKATTANPPPQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtaaacatgtccttccctgtgagtatgggggctctgcttaaggcagacctc
caggaggacgctgctagccgggacgagggcttgtgtgttgtcggtattttcggtaaaagc
aacatgcagcccggaccgccgaaggagtctattatcaacaatttggcggacaaacacatt
ttctcgctgttcggcggaccggaggacggcggcaacgcggacagccacatccaggctttc
tacagccaggagaaccgggtgctgtacctgctgctctcctccgtctgcgacagccggcag
ctgctgcgggcctgcgagtctctgagcgccgccaccggccactccgacgcccacgacttc
tggaaaggcctggacagacagcactgcctccatctgctctacatgttctccgtgtgccac
gtcctcctgctcgtccaccctaaccagaccttcgatgtgacctacgaccggctcttcaga
gccctggacgccctgcgacagaaggtgctgcctctgattcgagctgccatcaaagactgt
ccggtgtccaaagagtggaaggtgaactgtcggccctgccctccacgcctgctcttcgtc
ttccagatgaacggctctctgaaggtcgctgcaaacggttcagagtctgggggaaaccca
gacaagcccaaaaagcactctcccaggaggaggttgcagcatgccctggaggaccaaatt
tatcggatcttccgtaaaagcagagtcctgaccaaccagagcagcaactgcttgtttact
gtgcccgccaaccaagcgtttgtgtacgtcataccggcagtagacgaggaccctgtgggt
gccctgcttggtcagctgcggtccaactgcatcttgtgtgaacaagacaccgtcacggtg
gtgtcaggaccgaggcgttatcagcagatgcgacgttcagttcggcagtccagcttcagc
ggagaccaaggcagcatgtcgatgggcggtcagctggtggactgcagcctgaaggaattc
ctctggcagcacgtggagctggtgctcaccaagaaaggctttgacgacagcgtcggccgc
aacccacaaccttcccactttgagctgccgacctactccaaatgggtccaggtcgcctcc
aggctccaccaagtcctgattagcaacacagaagaagaattagccgagctagccacgaaa
gtgcaaggccagctgaaggttttggaggcttttcttgatgctgacacaaagttctctgag
aacaggtgccagaaagctctgccactggctcacagcgcttaccagtccaaccttccccat
aactacaccaccacagtgcacaaaaaccagctggcgcaggctctgcgggtgtacagccag
catgcccgaggagtcgctttccagcgctacgcactgcagcttcatgaggactgctacaag
ttctggagcaacggccaccagctgtgtgaggagcgaagcctgactgaccaacactgtgtt
cacaagttccacctgctgcctcagccaggagagaagccagatctggatcgcaatccacca
atcatgaaccacaacagcagggggcgctccaccagctcctgtaactgcggcaggaaacag
gctcctcgtgaggatccgtttgacatccaggctgccaattatgacttctaccagatactg
gaggagaaatgctgcgggaagctggagaggattgagtttccggtgttccagcccagcact
cctgacccagctccggcctgcaaccaagctcagcgactcccaagtgaggcctcagggtct
ggtgaggcagagaggctgaaggagccaagcactgctcagagccacacacctggagacccc
agcctcagcctggctctcagtctaggccagtccacagacagcctggggccctacgcggat
ggagatggcaccgaaacccaagtccagcaaaagaggccaagccttgttgaccgccagccc
tccactgtggagtatctcccgggtatgatgcactctggctgccccaagggcctgctaccc
aagttttccagctggtcgctggtcaaactgggcccagccaagtcatacaactgccacacc
ggtctggaacagccaggcttcttacctggctcctccttcctcttaccgtgggacttggtg
atccgctctcggtcggaggaggacaccggactgacggagcctttggatggaggcacctcc
tcgtggccagccccaaacaagaccctggtgggaaagcgagggagcaccggagggctcggt
aggagtcgcaggagggatgacatggctcggatattcgtggggtttgagtatgaagacagc
agaggaagacgcttcatcagctgcgggccggataagatagtgaaggtgctgggaccaggg
ggcgccaaagaacctgccaccagggtgctaaacaccgacatgccgctgaacatccagtcc
ccttcacagggccgcggcctgaagcctcactttgcccagctggctcgcctttttattgtg
gtgccggacgccccactggaggttaccctcaacccacaggtactgcccggtcctcctccc
tgcccagttttccacccagagaagacagatatagtgttgccacctgatggtctttgggtt
ctgcggttcccttattcctacgcaacagatcgcggtccctgttacccccccaaagagaac
caaccactcaacaactacaaggtgctgcgaggcatcctgaaggccacgactgctaaccct
ccaccacagtaa
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