Sander lucioperca (pikeperch): 116056004
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Entry
116056004 CDS
T07345
Name
(RefSeq) core histone macro-H2A.1 isoform X1
KO
K11251
histone H2A
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03082
ATP-dependent chromatin remodeling
sluc04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116056004
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116056004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116056004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116056004
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
116056004
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116056004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
TonB_N
YihI
Clp_N
Motif
Other DBs
NCBI-GeneID:
116056004
NCBI-ProteinID:
XP_031163956
Ensembl:
ENSSLUG00000017319
LinkDB
All DBs
Position
13:34256813..34279682
Genome browser
AA seq
373 aa
AA seq
DB search
MSSRGGKKKSTKTSRSTKAGVIFPVGRMLRYIKRGLPKYRIGVGAPVYLAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIAAGGVLPNIHPELLAKKRGA
KGKLETPVSPAPEKKPKPVKKSASKKMSGKKAGAKAKKQGEVSKAASADSTTEGSPVDSF
TVLSTKSLFLGQKLNLIHSEVSNLAGFDVEGVINPTNAELELKDDLGGEVGSALEKKGGK
EFTEALSELQKKNGPLEVAGAVLTAGFGLPAKYVIHCNSPGWGSDKCEEMLDKTVKNCLA
LADEKKLKSVAFPSIGSGRNGFPKQTAAQLILKAISTYFVATMSSTIKTVYFVLFDSESI
GIYVQEMAKLETS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgaggaggaaagaagaagtcaaccaagacatcccggtctaccaaggccggg
gtcatctttcctgtaggacgcatgctgcgctacatcaagaggggcctgcccaaatatcgc
attggggtgggagcacccgtctacctggcggctgtccttgagtatcttactgctgagatt
ttggagttggcaggtaatgcagccagagacaataagaagggtcgcgtcacaccacgacac
atcctgctggccatcgccaacgatgaggagttgaaccagttgctgaaaggtgtgaccatc
gcagcaggtggagtcttgcccaatatccatccagagctgctggctaagaagagaggtgca
aagggaaaactggagacacccgtctcacccgccccagagaagaaacccaagccagtcaaa
aaatcagcaagcaagaaaatgagtgggaaaaaagcaggagcgaaggctaagaagcagggt
gaggtgagcaaggcggcgtcagcagacagcaccacagagggatctccagttgacagcttc
accgtgctctccacaaagagcctcttcctgggtcaaaagctcaacctcattcacagcgag
gtcagtaacttggctggctttgacgtggagggggtcatcaaccccaccaatgctgaactt
gaacttaaagatgatctaggtggtgaagtaggctctgctctggaaaagaagggagggaag
gagttcactgaagcgttgtcggagttgcagaagaaaaacggccctctggaggtggctggc
gctgtgttgaccgccggtttcggtctgcctgctaagtatgtcatccactgtaacagtcca
ggctggggctccgacaagtgtgaggagatgttggacaagacggtgaagaactgcctggct
ctggcggatgagaagaaactgaagtctgtggctttcccctccattggtagcgggaggaat
ggcttcccaaagcagactgcagcccagctgatccttaaggccatctccacctactttgtg
gccaccatgtcttccaccatcaagaccgtctactttgtgctgtttgacagcgagagcatc
gggatctacgtgcaggaaatggctaagctggagacgagctaa
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